Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 1.3e-137 493.0 253 100.0
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 4.0e-110 401.7 211 98.1
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 8.5e-92 340.9 211 81.0
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 6.9e-86 321.2 211 77.3
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 9.1e-78 294.3 211 67.8
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 4.7e-74 282.0 218 62.8
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 6.1e-74 281.6 212 64.6
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 7.9e-74 281.2 212 65.6
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 1.0e-73 280.8 212 65.1
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 1.0e-73 280.8 219 61.2
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 1.0e-73 280.8 215 63.7
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.4e-73 280.4 218 62.4
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 3.0e-73 279.3 212 65.1
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 3.0e-73 279.3 218 62.4
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 6.7e-73 278.1 214 65.0
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 2.0e-72 276.6 218 63.3
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 2.0e-72 276.6 218 61.9
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 2.0e-72 276.6 218 61.5
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 4.4e-72 275.4 218 62.4
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 5.7e-72 275.0 216 63.9
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 5.7e-72 275.0 218 62.8
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 9.7e-72 274.2 218 61.0
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 1.7e-71 273.5 218 61.0
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 3.7e-71 272.3 219 61.2
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 4.8e-71 271.9 218 62.4
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 8.2e-71 271.2 219 62.6
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.4e-70 270.4 218 58.7
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 2.4e-70 269.6 216 63.0
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 2.4e-70 269.6 216 63.0
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 5.3e-70 268.5 212 62.7
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 5.3e-70 268.5 212 62.7
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 5.3e-70 268.5 216 60.2
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 5.3e-70 268.5 218 61.9
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 9.1e-70 267.7 219 63.5
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 1.2e-69 267.3 213 61.5
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 1.6e-69 266.9 218 57.8
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 2.0e-69 266.5 218 60.1
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 3.5e-69 265.8 218 59.6
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 5.9e-69 265.0 215 61.4
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 7.7e-69 264.6 218 61.5
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 7.7e-69 264.6 218 57.8
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 1.0e-68 264.2 217 61.3
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 1.3e-68 263.8 217 63.1
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 2.2e-68 263.1 219 61.6
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 2.9e-68 262.7 221 61.1
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 5.0e-68 261.9 215 60.9
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 5.0e-68 261.9 218 60.1
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 8.5e-68 261.2 218 59.6
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 5.5e-67 258.5 218 59.6
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 9.4e-67 257.7 214 59.3
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 1.2e-66 257.3 219 58.9
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 2.1e-66 256.5 214 58.9
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 2.1e-66 256.5 218 60.1
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 2.7e-66 256.1 213 59.2
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 8.0e-66 254.6 218 58.7
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 1.4e-65 253.8 214 59.8
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 4.0e-65 252.3 216 57.4
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 5.2e-65 251.9 218 61.0
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 8.8e-65 251.1 218 60.6
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 5.7e-64 248.4 212 58.5
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 5.7e-64 248.4 218 55.5
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 5.7e-64 248.4 214 60.3
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 9.7e-64 247.7 210 58.6
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 9.7e-64 247.7 219 60.3
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 2.2e-63 246.5 218 59.2
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 3.7e-63 245.7 218 57.8
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 3.7e-63 245.7 218 57.8
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 3.7e-63 245.7 214 60.7
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 4.8e-63 245.4 213 57.7
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 6.3e-63 245.0 215 58.1
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 8.2e-63 244.6 216 58.3
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 8.2e-63 244.6 216 58.3
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 8.2e-63 244.6 213 58.2
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 4.1e-62 242.3 215 57.2
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 4.1e-62 242.3 215 58.1
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 4.1e-62 242.3 215 58.1
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 4.1e-62 242.3 212 57.5
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 5.3e-62 241.9 221 57.9
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 5.9e-61 238.4 215 57.7
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 6.1e-58 228.4 213 57.7
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 1.4e-57 227.3 213 57.3
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 2.2e-55 219.9 217 54.8
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 2.2e-55 219.9 217 54.8
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 2.7e-53 213.0 214 54.2
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 1.9e-51 206.8 165 61.2
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 1.2e-50 204.1 215 49.8
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 1.4e-49 200.7 211 51.7
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 4.0e-49 199.1 165 59.4
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 1.2e-48 197.6 212 49.5
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 9.2e-46 188.0 216 49.1
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 1.6e-45 187.2 214 50.0
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 5.9e-45 185.3 219 46.6
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 5.9e-45 185.3 216 48.1
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 5.9e-45 185.3 216 48.1
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 4.3e-43 179.1 214 45.8
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 4.7e-42 175.6 219 47.9
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 4.7e-42 175.6 215 46.5
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 5.2e-41 172.2 202 49.5
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 8.9e-41 171.4 219 46.6
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 1.5e-40 170.6 214 45.8
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 6.4e-39 165.2 214 45.3
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 6.4e-39 165.2 211 46.0
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 2.1e-34 150.2 215 43.3
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 4.7e-34 149.1 217 39.6
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 8.9e-33 144.8 216 42.1
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 8.9e-33 144.8 141 52.5
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 1.2e-32 144.4 141 51.8
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 1.1e-30 137.9 216 39.4
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 3.1e-25 119.8 217 39.6
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 9.9e-24 114.8 88 64.8
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 2.2e-23 113.6 215 37.2
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 1.1e-22 111.3 229 34.1
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 2.1e-21 107.1 215 33.0
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 2.1e-18 97.1 106 49.1
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 4.0e-17 92.8 101 42.6
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 6.8e-17 92.0 51 86.3
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 3.2e-14 83.2 67 59.7
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 3.2e-14 83.2 67 59.7
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 4.3e-11 72.8 175 32.0
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 1.9e-06 57.4 38 63.2


User provided reference genes

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