Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0468831 Helianthus annuus HOM05D003201 ORTHO05D008914 1.4e-159 566.2 280 100.0
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 3.3e-105 385.6 277 69.7
CSS0009288 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 6.7e-98 361.3 279 64.2
CSS0050223 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 1.1e-97 360.5 279 64.2
Lsat_1_v5_gn_5_73181 Lactuca sativa HOM05D003201 ORTHO05D008914 3.3e-97 359.0 272 66.9
Actinidia29333 Actinidia chinensis HOM05D003201 ORTHO05D008914 4.8e-96 355.1 280 62.1
SGA_v2.0_scaffold45G16974 Striga asiatica HOM05D003201 ORTHO05D008914 2.0e-94 349.7 279 61.6
CiPaw.07G210300 Carya illinoinensis HOM05D003201 ORTHO05D008914 1.7e-93 346.7 278 61.2
PGSC0003DMG402028340 Solanum tuberosum HOM05D003201 ORTHO05D008914 1.7e-93 346.7 282 59.9
QL12p025722 Quercus lobata HOM05D003201 ORTHO05D008914 4.2e-92 342.0 279 61.6
MD15G1105100 Malus domestica HOM05D003201 ORTHO05D008914 5.5e-92 341.7 281 60.1
Sopen05g007740 Solanum pennellii HOM05D003201 ORTHO05D008914 1.2e-91 340.5 282 59.6
Solyc05g012940.4 Solanum lycopersicum HOM05D003201 ORTHO05D008914 2.1e-91 339.7 282 59.2
DCAR_002183 Daucus carota HOM05D003201 ORTHO05D008914 3.6e-91 339.0 277 62.1
Manes.02G219100 Manihot esculenta HOM05D003201 ORTHO05D008914 1.0e-90 337.4 278 59.7
GSVIVG01035604001 Vitis vinifera HOM05D003201 ORTHO05D008914 2.3e-90 336.3 280 59.6
Nitab4.5_0000391g0210 Nicotiana tabacum HOM05D003201 ORTHO05D008914 1.5e-89 333.6 281 57.7
CAN.G964.23 Capsicum annuum HOM05D003201 ORTHO05D008914 2.0e-89 333.2 281 57.3
Prupe.1G456900 Prunus persica HOM05D003201 ORTHO05D008914 2.0e-89 333.2 280 60.4
SalBow8G4280 Salvia bowleyana HOM05D003201 ORTHO05D008914 2.0e-89 333.2 278 57.6
Gohir.A12G202300 Gossypium hirsutum HOM05D003201 ORTHO05D008914 4.3e-89 332.0 275 59.6
Thecc.03G318200 Theobroma cacao HOM05D003201 ORTHO05D008914 9.7e-89 330.9 276 58.3
Duzib084G1420 Durio zibethinus HOM05D003201 ORTHO05D008914 2.2e-88 329.7 282 57.8
Gohir.D12G205000 Gossypium hirsutum HOM05D003201 ORTHO05D008914 2.2e-88 329.7 275 58.9
Cc11_g12550 Coffea canephora HOM05D003201 ORTHO05D008914 2.8e-88 329.3 282 57.8
Nitab4.5_0012553g0020 Nicotiana tabacum HOM05D003201 ORTHO05D008914 2.8e-88 329.3 281 56.9
Aqoxy7G00979 Aquilegia oxysepala HOM05D003201 ORTHO05D008914 6.3e-88 328.2 283 58.3
Migut.E00069 Erythranthe guttata HOM05D003201 ORTHO05D008914 6.3e-88 328.2 278 56.5
MELO3C011176.2 Cucumis melo HOM05D003201 ORTHO05D008914 1.8e-87 326.6 281 57.7
Dinv37468 Davidia involucrata HOM05D003201 ORTHO05D008914 1.8e-87 326.6 233 67.0
Gorai.008G219900 Gossypium raimondii HOM05D003201 ORTHO05D008914 2.4e-87 326.2 276 59.4
CANSAT54G1971 Cannabis sativa HOM05D003201 ORTHO05D008914 5.3e-87 325.1 278 58.3
Cpa.g.sc30.52 Carica papaya HOM05D003201 ORTHO05D008914 1.0e-85 320.9 278 56.1
Hund03239 Selenicereus undatus HOM05D003201 ORTHO05D008914 1.3e-85 320.5 278 57.9
Eucgr.E04307 Eucalyptus grandis HOM05D003201 ORTHO05D008914 2.9e-85 319.3 280 57.9
ClCG08G012570 Citrullus lanatus HOM05D003201 ORTHO05D008914 3.8e-85 318.9 282 56.4
Ciclev10016172m.g Citrus clementina HOM05D003201 ORTHO05D008914 6.5e-85 318.2 281 56.6
Peaxi162Scf00314g00636 Petunia axillaris HOM05D003201 ORTHO05D008914 8.5e-85 317.8 280 55.7
Rhsim07G0174100 Rhododendron simsii HOM05D003201 ORTHO05D008914 8.5e-85 317.8 374 47.1
FvH4_2g36540 Fragaria vesca HOM05D003201 ORTHO05D008914 1.1e-84 317.4 283 56.2
RcHm_v2.0_Chr6g0305311 Rosa chinensis HOM05D003201 ORTHO05D008914 2.7e-83 312.8 282 55.7
Psat5g023760 Pisum sativum HOM05D003201 ORTHO05D008914 4.7e-83 312.0 280 53.9
TPR.G12401 Trifolium pratense HOM05D003201 ORTHO05D008914 6.1e-83 311.6 282 53.5
CsaV3_2G031270 Cucumis sativus L. HOM05D003201 ORTHO05D008914 1.0e-82 310.8 285 55.8
Glyma.06G078200 Glycine max HOM05D003201 ORTHO05D008914 1.4e-82 310.5 279 55.6
FAN15G0760 Fragaria x ananassa HOM05D003201 ORTHO05D008914 3.9e-82 308.9 284 56.3
arahy.Tifrunner.gnm1.ann1.6BLG7S Arachis hypogaea HOM05D003201 ORTHO05D008914 5.1e-82 308.5 303 51.5
AUR62028026 Chenopodium quinoa HOM05D003201 ORTHO05D008914 5.1e-82 308.5 280 53.6
arahy.Tifrunner.gnm1.ann1.N5J460 Arachis hypogaea HOM05D003201 ORTHO05D008914 2.6e-81 306.2 309 50.8
PSO782G1293 Papaver somniferum HOM05D003201 ORTHO05D008914 3.3e-81 305.8 282 54.3
Lj1g0010900 Lotus japonicus HOM05D003201 ORTHO05D008914 5.7e-81 305.1 278 53.2
THA.LOC104811993 Tarenaya hassleriana HOM05D003201 ORTHO05D008914 1.3e-80 303.9 277 55.6
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 8.2e-80 301.2 273 54.2
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 1.8e-79 300.1 274 54.7
BcaNung03501 Brassica carinata HOM05D003201 ORTHO05D008914 1.8e-79 300.1 277 53.8
A03p52400 Brassica napus HOM05D000936 ORTHO05D008914 1.8e-79 300.1 275 53.8
C07p50860 Brassica napus HOM05D000936 ORTHO05D008914 1.8e-79 300.1 277 53.8
Lalb_Chr11g0064231 Lupinus albus HOM05D003201 ORTHO05D008914 1.8e-79 300.1 276 54.7
Sp7g18670 Schrenkiella parvula HOM05D003201 ORTHO05D008914 1.8e-79 300.1 275 53.8
BcaC06g30651 Brassica carinata HOM05D003201 ORTHO05D008914 2.4e-79 299.7 275 53.1
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 2.4e-79 299.7 273 53.5
BraA03t14319Z Brassica rapa HOM05D003201 ORTHO05D008914 2.4e-79 299.7 275 54.9
Glyma.04G077000 Glycine max HOM05D003201 ORTHO05D008914 2.4e-79 299.7 279 54.5
PGR042G2091 Punica granatum HOM05D003201 ORTHO05D008914 4.1e-79 298.9 281 54.4
EL10Ac8g19259 Beta vulgaris HOM05D003201 ORTHO05D008914 7.0e-79 298.1 278 54.0
BolC7t45584H Brassica oleracea HOM05D000936 ORTHO05D008914 9.1e-79 297.7 275 53.5
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 2.0e-78 296.6 275 52.7
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 5.9e-78 295.0 280 55.0
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 7.7e-78 294.7 273 53.5
Thhalv10025951m.g Eutrema salsugineum HOM05D003201 ORTHO05D008914 7.7e-78 294.7 275 53.8
Carub.0007s2085 Capsella rubella HOM05D003201 ORTHO05D008914 1.0e-77 294.3 275 54.2
CARHR227150 Cardamine hirsuta HOM05D003201 ORTHO05D008914 1.7e-77 293.5 275 53.1
AT4G20325 Arabidopsis thaliana HOM05D003201 ORTHO05D008914 2.2e-77 293.1 275 53.1
AL7G33570 Arabidopsis lyrata HOM05D003201 ORTHO05D008914 3.8e-77 292.4 275 53.5
TWI18G0285 Tripterygium wilfordii HOM05D003201 ORTHO05D008914 1.5e-76 290.4 275 53.8
Atru.BG.264.p Acer truncatum HOM05D003201 ORTHO05D008914 7.2e-76 288.1 267 54.7
Ca_15643_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000219 5.2e-74 282.0 267 51.7
HPP92_024271 Vanilla planifolia HOM05D003201 ORTHO05D008914 9.7e-73 277.7 258 56.6
VMungo1309G0938 Vigna mungo HOM05D003201 ORTHO05D008914 3.7e-72 275.8 351 43.0
Phvul.009G102800 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 1.2e-70 270.8 205 60.0
FAN20G1097 Fragaria x ananassa HOM05D000163 ORTHO05D008914 1.0e-69 267.7 250 54.4
Sc23g0004340 Simmondsia chinensis HOM05D003201 ORTHO05D008914 3.8e-69 265.8 210 60.5
ATR0686G110 Amborella trichopoda HOM05D003201 ORTHO05D008914 4.2e-68 262.3 253 51.8
vmacro05085 Vaccinium macrocarpon HOM05D003201 ORTHO05D008914 2.7e-67 259.6 498 34.7
BcaNung03722 Brassica carinata HOM05D000936 ORTHO05D001411 8.0e-67 258.1 275 48.0
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 1.7e-64 250.4 255 51.8
AUR62020698 Chenopodium quinoa HOM05D003201 ORTHO05D008914 7.7e-62 241.5 278 46.8
SEGI_35572 Sequoiadendron giganteum HOM05D003201 ORTHO05D008914 2.9e-61 239.6 279 41.9
TAR636G2614 Trochodendron aralioides HOM05D003201 ORTHO05D008914 3.0e-58 229.6 157 66.2
Mapoly0037s0034 Marchantia polymorpha HOM05D003201 ORTHO05D008914 4.0e-50 202.6 206 43.7
FAN27G2114 Fragaria x ananassa HOM05D000163 ORTHO05D000219 1.4e-47 194.1 215 49.3
Potri.006G281101 Populus trichocarpa HOM05D003201 ORTHO05D008914 1.4e-47 194.1 186 52.7
AagrBONN_evm.TU.Sc2ySwM_344.2003 Anthoceros agrestis HOM05D003201 ORTHO05D008914 5.4e-47 192.2 169 49.1
Sed0017242 Sechium edule HOM05D003201 ORTHO05D008914 5.4e-47 192.2 182 52.2
Pp3c10_22770 Physcomitrium patens HOM05D003201 ORTHO05D008914 3.3e-44 183.0 265 37.4
unitig_32.g11042 Utricularia gibba HOM05D003201 ORTHO05D008914 8.0e-43 178.3 190 47.9
SMO115G0061 Selaginella moellendorffii HOM05D003201 ORTHO05D008914 1.4e-42 177.6 257 37.0
SHI31610 Sapria himalayana HOM05D003201 ORTHO05D008914 9.2e-39 164.9 114 60.5
Zm00001eb079750 Zea mays HOM05D003201 ORTHO05D008914 1.2e-35 154.5 187 44.4
Nn7g38306 Nelumbo nucifera HOM05D003201 ORTHO05D008914 6.4e-32 142.1 99 61.6
MD08G1125300 Malus domestica HOM05D003201 ORTHO05D008914 3.6e-27 126.3 227 36.1
COL.COLO4_10365 Corchorus olitorius HOM05D003201 ORTHO05D008914 4.1e-23 112.8 174 42.0
Os04g0476400 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008914 7.8e-22 108.6 86 55.8
CDE05G1961 Ceratophyllum demersum HOM05D003201 ORTHO05D008914 1.3e-21 107.8 143 45.5
Hma1.2p1_1357F.1_g277905 Hydrangea macrophylla HOM05D003201 ORTHO05D008914 2.1e-19 100.5 71 62.0
TPR.G12326 Trifolium pratense HOM05D003201 ORTHO05D008914 1.8e-18 97.4 72 59.7
CBR_g23989 Chara braunii HOM05D003201 ORTHO05D008914 2.9e-16 90.1 68 52.9
PRCOL_00004174 Prasinoderma coloniale HOM05D003201 ORTHO05D008914 1.1e-15 88.2 194 28.9
Cre07.g320800 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008914 2.4e-15 87.0 237 24.9
CBR_g23991 Chara braunii HOM05D003201 ORTHO05D008914 2.8e-11 73.6 52 57.7


User provided reference genes

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