Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 3.5e-59 231.5 121 100.0
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 6.5e-50 200.7 120 85.0
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 3.6e-48 194.9 120 81.7
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 3.0e-47 191.8 120 80.8
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 5.2e-47 191.0 120 80.0
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 8.8e-47 190.3 121 80.2
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 1.2e-46 189.9 120 78.3
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 5.7e-46 187.6 119 79.0
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 1.3e-45 186.4 118 83.1
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 3.7e-45 184.9 120 78.3
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 6.3e-45 184.1 120 77.5
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 8.3e-45 183.7 120 77.5
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 8.3e-45 183.7 119 78.2
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 1.4e-44 183.0 120 75.8
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 3.1e-44 181.8 120 75.8
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 5.4e-44 181.0 120 76.7
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 7.0e-44 180.6 121 76.0
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 7.0e-44 180.6 120 72.5
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 9.1e-44 180.3 120 78.3
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 9.1e-44 180.3 120 75.0
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 9.1e-44 180.3 120 75.0
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.2e-43 179.9 120 76.7
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 1.2e-43 179.9 120 74.2
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 1.6e-43 179.5 119 77.3
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 1.6e-43 179.5 120 75.8
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 2.7e-43 178.7 120 76.7
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 3.5e-43 178.3 120 74.2
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 4.5e-43 177.9 120 75.8
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 4.5e-43 177.9 120 75.8
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 4.5e-43 177.9 118 77.1
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 7.7e-43 177.2 118 76.3
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 7.7e-43 177.2 118 73.7
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.0e-42 176.8 120 76.7
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.0e-42 176.8 119 75.6
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 1.3e-42 176.4 120 73.3
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 1.3e-42 176.4 116 75.9
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 1.7e-42 176.0 122 74.6
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 1.7e-42 176.0 118 76.3
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 2.9e-42 175.3 120 73.3
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 3.8e-42 174.9 119 76.5
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 5.0e-42 174.5 119 73.1
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 5.0e-42 174.5 120 72.5
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 8.5e-42 173.7 119 73.9
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 1.1e-41 173.3 120 72.5
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 1.1e-41 173.3 120 69.2
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 1.1e-41 173.3 120 75.0
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.9e-41 172.6 119 72.3
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 2.5e-41 172.2 117 75.2
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 3.2e-41 171.8 119 71.4
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 4.2e-41 171.4 119 71.4
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 5.5e-41 171.0 120 70.0
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 7.2e-41 170.6 120 71.7
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 9.5e-41 170.2 120 68.3
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 9.5e-41 170.2 119 75.6
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 1.2e-40 169.9 151 61.6
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 2.1e-40 169.1 119 70.6
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 2.8e-40 168.7 119 74.8
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 3.6e-40 168.3 118 68.6
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 3.6e-40 168.3 119 68.1
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 4.7e-40 167.9 119 69.7
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 1.0e-39 166.8 119 68.9
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 1.0e-39 166.8 119 68.9
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 1.0e-39 166.8 119 68.9
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 1.0e-39 166.8 119 68.9
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 1.4e-39 166.4 119 68.9
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 1.4e-39 166.4 119 68.9
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 1.4e-39 166.4 119 68.9
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.4e-39 166.4 118 71.2
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.4e-39 166.4 118 71.2
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 1.8e-39 166.0 119 68.9
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 2.3e-39 165.6 112 70.5
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 3.0e-39 165.2 120 70.0
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 3.0e-39 165.2 120 69.2
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 5.2e-39 164.5 118 71.2
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 5.2e-39 164.5 118 71.2
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 6.8e-39 164.1 120 68.3
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 1.5e-38 162.9 121 66.9
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 1.5e-38 162.9 120 64.2
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 1.5e-38 162.9 136 63.2
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 2.0e-38 162.5 120 64.2
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 2.6e-38 162.2 118 67.8
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 2.6e-38 162.2 120 64.2
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 5.7e-38 161.0 116 70.7
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 6.3e-37 157.5 118 69.5
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 4.1e-36 154.8 107 71.0
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 7.0e-36 154.1 118 66.1
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 4.5e-35 151.4 119 59.7
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 1.3e-34 149.8 113 62.8
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 8.6e-34 147.1 101 70.3
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.1e-33 146.7 108 68.5
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 1.8e-31 139.4 86 81.4
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 2.3e-31 139.0 174 46.6
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 3.0e-31 138.7 118 61.0
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 6.8e-31 137.5 85 82.4
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 4.9e-29 131.3 87 78.2
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 6.4e-29 131.0 86 79.1
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 1.4e-28 129.8 100 66.0
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 1.8e-28 129.4 85 71.8
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 2.4e-28 129.0 86 75.6
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 4.1e-28 128.3 89 74.2
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 9.2e-28 127.1 86 74.4
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 2.7e-27 125.6 87 69.0
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 2.3e-26 122.5 117 54.7
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 8.6e-26 120.6 85 71.8
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 1.8e-23 112.8 121 48.8
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 2.3e-23 112.5 81 66.7
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 4.0e-23 111.7 118 49.2
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 5.8e-22 107.8 85 62.4
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 9.8e-22 107.1 107 46.7
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.1e-20 103.6 85 58.8
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.9e-20 102.8 116 49.1
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 3.9e-18 95.1 54 79.6
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 1.5e-09 66.6 116 39.7


User provided reference genes

Program Settings