Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0468771 Helianthus annuus HOM05D007924 ORTHO05D010328 1.0e-54 216.5 106 100.0
HanXRQMTg0579161 Helianthus annuus HOM05D007924 ORTHO05D010328 1.5e-37 159.5 79 97.5
HanXRQMTg0579521 Helianthus annuus HOM05D007924 ORTHO05D010328 1.5e-37 159.5 79 97.5
DCAR_032428 Daucus carota HOM05D007924 ORTHO05D010328 1.8e-35 152.5 79 92.4
SGA_v2.0_scaffold575G53004 Striga asiatica HOM05D007924 ORTHO05D010328 2.6e-34 148.7 89 82.0
GSVIVG01000955001 Vitis vinifera HOM05D007924 ORTHO05D010328 3.4e-34 148.3 89 80.9
HanXRQChr00c0055g0571411 Helianthus annuus HOM05D007924 ORTHO05D010328 4.4e-34 147.9 72 100.0
Lj2P1227T93 Lonicera japonica HOM05D007924 ORTHO05D010328 4.4e-34 147.9 79 88.6
Oeu018666.1 Olea europaea HOM05D007924 ORTHO05D010328 5.7e-34 147.5 79 88.6
PGR028G0018 Punica granatum HOM05D007924 ORTHO05D010328 1.7e-33 146.0 79 88.6
Sed0020154 Sechium edule HOM05D007924 ORTHO05D010328 1.7e-33 146.0 79 87.3
AT2G07707 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 2.9e-33 145.2 80 86.2
ATMG00480 Arabidopsis thaliana HOM05D007924 ORTHO05D010328 2.9e-33 145.2 80 86.2
CARHR282860 Cardamine hirsuta HOM05D007924 ORTHO05D010328 2.9e-33 145.2 80 86.2
PGSC0003DMG400011350 Solanum tuberosum HOM05D007924 ORTHO05D010328 2.9e-33 145.2 77 89.6
RhsimMtG0003200 Rhododendron simsii HOM05D007924 ORTHO05D010328 6.4e-33 144.1 79 86.1
TPR.G7050 Trifolium pratense HOM05D007924 ORTHO05D010328 6.4e-33 144.1 89 78.7
BraSC48t46292Z Brassica rapa HOM05D007924 ORTHO05D010328 8.3e-33 143.7 80 85.0
BraSC48t46309Z Brassica rapa HOM05D007924 ORTHO05D010328 8.3e-33 143.7 80 85.0
LjContig00315g0007302 Lotus japonicus HOM05D007924 ORTHO05D010328 1.1e-32 143.3 89 78.7
Nn1g10039 Nelumbo nucifera HOM05D007924 ORTHO05D010328 1.4e-32 142.9 79 86.1
Nn1g10153 Nelumbo nucifera HOM05D007924 ORTHO05D010328 1.4e-32 142.9 79 86.1
CAN.G1180.17 Capsicum annuum HOM05D007924 ORTHO05D010328 1.8e-32 142.5 77 88.3
Thhalv10029138m.g Eutrema salsugineum HOM05D007924 ORTHO05D010328 1.8e-32 142.5 80 83.8
Lalb_Chr00c24g0406701 Lupinus albus HOM05D007924 ORTHO05D010328 1.8e-32 142.5 89 78.7
Gorai.001G164500 Gossypium raimondii HOM05D007924 ORTHO05D010328 2.4e-32 142.1 80 86.2
CSS0018158 Camellia sinensis var. sinensis HOM05D007924 ORTHO05D010328 3.2e-32 141.7 79 84.8
Nitab4.5_0000172g0710 Nicotiana tabacum HOM05D007924 ORTHO05D010328 5.4e-32 141.0 84 82.1
Nitab4.5_0003945g0040 Nicotiana tabacum HOM05D007924 ORTHO05D010328 9.2e-32 140.2 77 85.7
CANSAT16G0013 Cannabis sativa HOM05D007924 ORTHO05D010328 1.2e-31 139.8 80 82.5
HanXRQChr09g0250631 Helianthus annuus HOM05D007924 ORTHO05D010328 2.0e-31 139.0 72 95.8
BolC1t03437H Brassica oleracea HOM05D007924 ORTHO05D010328 5.9e-31 137.5 80 81.2
RcHm_v2.0_Chr6g0257961 Rosa chinensis HOM05D007924 ORTHO05D010328 1.3e-30 136.3 79 81.0
RcHm_v2.0_MTg0498901 Rosa chinensis HOM05D007924 ORTHO05D010328 1.3e-30 136.3 79 81.0
RcHm_v2.0_MTg0499211 Rosa chinensis HOM05D007924 ORTHO05D010328 3.9e-30 134.8 79 79.7
Duzib116G0340 Durio zibethinus HOM05D007924 ORTHO05D010328 5.0e-30 134.4 80 81.2
SHI38116 Sapria himalayana HOM05D007924 ORTHO05D010328 5.0e-30 134.4 79 81.0
CsaV3_5G016970 Cucumis sativus L. HOM05D007924 ORTHO05D010328 1.1e-29 133.3 89 73.0
Lj3g0001131 Lotus japonicus HOM05D007924 ORTHO05D010328 4.3e-29 131.3 79 81.0
CsaV3_5G015830 Cucumis sativus L. HOM05D007924 ORTHO05D010328 2.8e-28 128.6 87 72.4
Nitab4.5_0028251g0010 Nicotiana tabacum HOM05D007924 ORTHO05D010328 5.2e-27 124.4 77 79.2
CAN.G1001.34 Capsicum annuum HOM05D007924 ORTHO05D010328 7.5e-26 120.6 77 77.9
Ca_03774_v3 Cicer arietinum L. HOM05D007924 ORTHO05D010328 4.6e-23 111.3 73 75.3
BolSC28t60326H Brassica oleracea HOM05D007924 ORTHO05D011743 3.9e-22 108.2 68 76.5
BraSC159t45717Z Brassica rapa HOM05D007924 ORTHO05D010328 3.9e-22 108.2 68 76.5
CsaV3_UNG210380 Cucumis sativus L. HOM05D007924 ORTHO05D010328 5.0e-22 107.8 68 77.9
Lalb_Chr14g0363841 Lupinus albus HOM05D007924 ORTHO05D010328 2.1e-20 102.4 89 61.8
C01p34680 Brassica napus HOM05D007924 ORTHO05D010328 2.8e-20 102.1 68 72.1
Nitab4.5_0000844g0160 Nicotiana tabacum HOM05D007924 ORTHO05D010328 6.2e-20 100.9 61 77.0
SabraMtG0001000 Salix brachista HOM05D007924 ORTHO05D010328 1.8e-19 99.4 67 76.1
Nitab4.5_0002418g0260 Nicotiana tabacum HOM05D007924 ORTHO05D010328 8.3e-17 90.5 57 77.2
CsaV3_3G039780 Cucumis sativus L. HOM05D000558 ORTHO05D006060 4.6e-15 84.7 69 63.8
Nitab4.5_0000172g1200 Nicotiana tabacum HOM05D007924 ORTHO05D007069 1.5e-13 79.7 52 75.0
Phvul.011G125800 Phaseolus vulgaris HOM05D007924 ORTHO05D010328 1.5e-13 79.7 46 82.6
SHI38118 Sapria himalayana HOM05D007924 ORTHO05D010328 1.5e-13 79.7 47 78.7
Ah.02g118920 Amaranthus hybridus HOM05D005794 ORTHO05D006814 2.8e-12 75.5 42 88.1
BraSC48t46342Z Brassica rapa HOM05D007924 ORTHO05D010328 1.4e-11 73.2 56 66.1
BolSC28t60430H Brassica oleracea HOM05D007924 ORTHO05D010328 8.9e-11 70.5 36 91.7
MD02G1208400 Malus domestica HOM05D007924 ORTHO05D010328 6.6e-06 54.3 28 85.7


User provided reference genes

Program Settings