Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 3.6e-138 495.0 262 100.0
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 2.5e-102 375.9 258 75.2
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 3.9e-84 315.5 254 64.2
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 6.3e-82 308.1 257 61.5
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 8.2e-82 307.8 257 62.3
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.1e-81 307.4 259 60.6
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.1e-81 307.4 259 60.6
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.8e-81 306.6 257 63.4
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.4e-81 306.2 257 63.4
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 4.1e-81 305.4 259 60.2
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 5.3e-81 305.1 259 60.2
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.2e-80 303.9 259 59.8
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 2.0e-80 303.1 257 61.1
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 3.5e-80 302.4 257 61.9
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 5.9e-80 301.6 259 59.5
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 5.9e-80 301.6 259 59.5
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 2.2e-79 299.7 257 60.3
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.4e-78 297.0 257 60.7
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.6e-77 293.5 257 59.9
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 2.1e-77 293.1 257 59.5
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 3.6e-77 292.4 257 58.0
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 4.7e-77 292.0 257 59.9
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 8.0e-77 291.2 258 58.9
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 8.0e-77 291.2 257 60.3
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 1.8e-76 290.0 257 59.1
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 2.3e-76 289.7 257 59.5
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 3.0e-76 289.3 257 59.1
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 3.0e-76 289.3 257 58.0
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 3.9e-76 288.9 257 59.1
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 5.2e-76 288.5 257 58.4
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 6.7e-76 288.1 257 58.4
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 1.1e-75 287.3 257 57.6
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 1.1e-75 287.3 257 57.6
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 1.1e-75 287.3 257 55.3
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 1.1e-75 287.3 270 58.1
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 2.6e-75 286.2 257 55.6
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 3.3e-75 285.8 257 59.5
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 5.7e-75 285.0 257 58.0
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 7.4e-75 284.6 257 56.8
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 1.3e-74 283.9 257 58.4
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 2.8e-74 282.7 257 59.9
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 3.7e-74 282.3 257 58.4
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 8.2e-74 281.2 256 60.5
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 8.2e-74 281.2 260 57.3
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 8.2e-74 281.2 257 59.5
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 1.1e-73 280.8 258 57.4
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 1.4e-73 280.4 268 57.1
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 1.8e-73 280.0 260 57.7
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 4.1e-73 278.9 258 57.8
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 5.3e-73 278.5 261 58.2
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 7.0e-73 278.1 257 59.5
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 9.1e-73 277.7 257 57.2
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 1.2e-72 277.3 213 69.0
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 1.0e-71 274.2 258 55.0
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 8.5e-71 271.2 257 53.7
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 1.1e-70 270.8 258 55.4
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 1.9e-70 270.0 253 58.9
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 2.1e-69 266.5 258 55.8
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 2.1e-69 266.5 259 52.5
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 2.7e-69 266.2 258 55.0
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 2.7e-69 266.2 246 56.9
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 3.6e-69 265.8 257 57.2
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 8.0e-69 264.6 252 56.7
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 1.4e-68 263.8 258 55.4
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 1.8e-68 263.5 258 54.3
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 1.8e-68 263.5 258 54.3
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 2.3e-68 263.1 258 54.3
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 2.3e-68 263.1 258 54.3
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 3.0e-68 262.7 257 52.5
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 5.2e-68 261.9 258 53.9
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 5.2e-68 261.9 257 51.4
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 8.8e-68 261.2 258 55.0
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 8.8e-68 261.2 258 53.5
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 2.8e-66 256.1 259 53.7
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 3.7e-66 255.8 257 54.9
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.4e-65 253.8 224 58.9
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 1.8e-65 253.4 258 53.9
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 2.4e-65 253.1 257 50.2
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 1.6e-64 250.4 254 54.3
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 3.5e-64 249.2 258 52.7
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 4.5e-64 248.8 258 54.3
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 3.8e-63 245.7 257 52.1
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 5.0e-63 245.4 258 50.4
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 5.0e-63 245.4 259 50.6
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 8.5e-63 244.6 257 51.8
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.1e-62 244.2 203 64.5
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 2.5e-62 243.0 257 52.9
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 7.2e-62 241.5 257 52.5
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 8.0e-61 238.0 257 47.5
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 1.4e-60 237.3 257 49.0
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 5.7e-59 231.9 259 51.0
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 7.5e-59 231.5 258 51.9
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 8.3e-58 228.0 203 60.6
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.3e-55 220.7 259 49.4
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.1e-54 217.6 258 48.4
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 4.2e-54 215.7 256 47.7
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 4.0e-52 209.1 253 49.0
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 7.5e-51 204.9 254 47.2
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 4.9e-50 202.2 268 45.9
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 8.3e-50 201.4 254 46.1
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 1.0e-47 194.5 239 47.7
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 1.3e-42 177.6 260 41.2
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 7.8e-40 168.3 259 41.3
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 2.3e-39 166.8 261 39.5
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 2.5e-38 163.3 265 38.9
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 3.4e-35 152.9 260 36.5
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 1.7e-34 150.6 134 58.2
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 4.9e-34 149.1 291 36.4
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 7.1e-33 145.2 258 37.6
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.6e-32 144.1 267 35.6
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 5.6e-30 135.6 265 36.2
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.6e-29 134.0 121 59.5
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 1.6e-29 134.0 129 53.5
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 2.8e-29 133.3 126 55.6
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 8.1e-29 131.7 120 60.8
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 5.2e-28 129.0 140 53.6
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 6.8e-28 128.6 129 51.9
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 8.6e-23 111.7 93 61.3
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.9e-22 110.5 176 40.3
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 2.5e-22 110.2 122 49.2
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 9.6e-22 108.2 96 55.2
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.2e-21 107.8 176 39.8
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 6.2e-21 105.5 159 41.5
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 4.4e-19 99.4 141 40.4
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.5e-14 84.3 147 37.4
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 9.6e-14 81.6 97 44.3
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.1e-12 78.2 105 43.8
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 6.0e-08 62.4 51 60.8
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.7e-07 60.8 82 41.5
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 3.3e-06 56.6 59 49.2


User provided reference genes

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