Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0462531 Helianthus annuus HOM05D002831 ORTHO05D004341 4.7e-96 354.8 208 100.0
ECA238G2131 Erigeron canadensis HOM05D002831 ORTHO05D004341 1.7e-58 229.9 199 78.4
ECA232G1618 Erigeron canadensis HOM05D002831 ORTHO05D004341 5.2e-31 138.7 212 56.6
Lsat_1_v5_gn_2_131301 Lactuca sativa HOM05D002831 ORTHO05D004341 5.8e-30 135.2 223 59.2
Actinidia34155 Actinidia chinensis HOM05D002831 ORTHO05D004341 1.4e-28 130.6 221 48.4
Dinv28390 Davidia involucrata HOM05D002831 ORTHO05D004341 2.1e-27 126.7 221 47.5
CSS0004722 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 1.7e-26 123.6 226 42.9
CSS0021117 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 1.7e-26 123.6 226 42.9
Actinidia08576 Actinidia chinensis HOM05D002831 ORTHO05D004341 1.9e-25 120.2 218 46.8
CSS0012099 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 2.5e-25 119.8 223 45.3
CSS0034926 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 2.5e-25 119.8 223 45.3
Hma1.2p1_0274F.1_g110180 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 1.2e-24 117.5 222 50.9
PGSC0003DMG400028898 Solanum tuberosum HOM05D002831 ORTHO05D004341 1.2e-24 117.5 220 46.8
Cc02_g02420 Coffea canephora HOM05D002831 ORTHO05D004341 2.8e-24 116.3 228 45.2
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 2.8e-24 116.3 212 47.2
Lj1P1004T73 Lonicera japonica HOM05D002831 ORTHO05D004341 3.6e-24 115.9 218 42.2
Sopen06g012030 Solanum pennellii HOM05D002831 ORTHO05D004341 4.7e-24 115.5 228 44.7
Oeu045362.1 Olea europaea HOM05D002831 ORTHO05D004341 1.8e-23 113.6 223 44.8
Peaxi162Scf00618g00748 Petunia axillaris HOM05D001680 ORTHO05D004341 1.2e-22 110.9 228 41.7
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 7.6e-22 108.2 209 44.0
Nitab4.5_0003825g0080 Nicotiana tabacum HOM05D002831 ORTHO05D004341 9.9e-22 107.8 218 45.4
Nitab4.5_0000572g0140 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.7e-21 107.1 222 43.2
DCAR_020268 Daucus carota HOM05D002831 ORTHO05D004341 2.2e-21 106.7 223 37.2
Thecc.03G183700 Theobroma cacao HOM05D002831 ORTHO05D004341 3.8e-21 105.9 220 44.5
Nitab4.5_0000084g0400 Nicotiana tabacum HOM05D002831 ORTHO05D004341 4.9e-21 105.5 222 42.8
Manes.14G023000 Manihot esculenta HOM05D002831 ORTHO05D004341 8.4e-21 104.8 217 52.1
COL.COLO4_10060 Corchorus olitorius HOM05D002831 ORTHO05D004341 1.9e-20 103.6 220 44.1
Actinidia31838 Actinidia chinensis HOM05D002831 ORTHO05D004341 2.4e-20 103.2 220 42.7
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 3.2e-20 102.8 209 45.0
Rhsim09G0200400 Rhododendron simsii HOM05D002831 ORTHO05D004341 3.2e-20 102.8 219 43.8
Peaxi162Scf00444g00016 Petunia axillaris HOM05D002831 ORTHO05D004341 4.2e-20 102.4 222 44.1
Duzib084G1013 Durio zibethinus HOM05D002831 ORTHO05D004341 9.3e-20 101.3 209 43.1
TWI23G0387 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 1.6e-19 100.5 225 37.8
DCAR_009393 Daucus carota HOM05D002831 ORTHO05D004341 2.1e-19 100.1 223 39.5
Duzib068G1050 Durio zibethinus HOM05D002831 ORTHO05D004341 2.1e-19 100.1 220 42.7
Manes.06G152100 Manihot esculenta HOM05D002831 ORTHO05D004341 6.0e-19 98.6 217 49.3
TAR374G0609 Trochodendron aralioides HOM05D002831 ORTHO05D004341 7.8e-19 98.2 225 42.2
Oeu036905.1 Olea europaea HOM05D002831 ORTHO05D004341 1.0e-18 97.8 220 40.5
Cpa.g.sc107.104 Carica papaya HOM05D002831 ORTHO05D004341 1.3e-18 97.4 222 41.0
SalBow4G1512 Salvia bowleyana HOM05D002831 ORTHO05D004341 1.7e-18 97.1 223 43.0
CAN.G126.12 Capsicum annuum HOM05D002831 ORTHO05D004341 2.3e-18 96.7 220 40.0
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 2.3e-18 96.7 220 41.8
Gohir.D12G256900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 6.6e-18 95.1 221 39.4
Gorai.008G275100 Gossypium raimondii HOM05D002831 ORTHO05D004341 6.6e-18 95.1 221 39.4
Duzib205G1365 Durio zibethinus HOM05D002831 ORTHO05D004341 8.7e-18 94.7 219 42.9
TAR375G0840 Trochodendron aralioides HOM05D002831 ORTHO05D004341 8.7e-18 94.7 222 51.8
Cfa016283 Carpinus fangiana HOM05D002831 ORTHO05D004341 1.9e-17 93.6 222 50.5
Gohir.A12G255500 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.9e-17 93.6 221 38.5
PSO782G2858 Papaver somniferum HOM05D002831 ORTHO05D004341 1.9e-17 93.6 220 36.4
unitig_37.g11969 Utricularia gibba HOM05D002831 ORTHO05D004341 1.9e-17 93.6 217 39.2
Oeu060465.1 Olea europaea HOM05D002831 ORTHO05D004341 2.5e-17 93.2 206 37.4
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 3.3e-17 92.8 218 50.9
CANSAT11G0421 Cannabis sativa HOM05D002831 ORTHO05D004341 7.3e-17 91.7 219 50.7
PSO478G4817 Papaver somniferum HOM05D002831 ORTHO05D004341 7.3e-17 91.7 220 36.4
Potri.004G079900 Populus trichocarpa HOM05D002831 ORTHO05D004341 7.3e-17 91.7 220 41.4
Atru.chr1.379 Acer truncatum HOM05D002831 ORTHO05D004341 1.3e-16 90.9 221 43.0
Atru.ctg97_1.16 Acer truncatum HOM05D002831 ORTHO05D004341 1.3e-16 90.9 221 43.0
TWI14G0525 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 2.1e-16 90.1 223 38.1
Sabra17G0120100 Salix brachista HOM05D002831 ORTHO05D004341 3.6e-16 89.4 220 40.5
Eucgr.A02748 Eucalyptus grandis HOM05D002831 ORTHO05D004341 4.8e-16 89.0 210 39.5
Gorai.006G199200 Gossypium raimondii HOM05D002831 ORTHO05D004341 6.2e-16 88.6 221 41.2
Lsat_1_v5_gn_9_56481 Lactuca sativa HOM05D002831 ORTHO05D004341 6.2e-16 88.6 209 47.4
PGSC0003DMG400010167 Solanum tuberosum HOM05D002831 ORTHO05D004341 8.1e-16 88.2 212 40.6
MSTRG.27090 Avicennia marina HOM05D002831 ORTHO05D004341 1.1e-15 87.8 224 41.1
Gohir.D09G177200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.1e-15 87.8 221 41.6
Gohir.A09G182600 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.4e-15 87.4 218 41.7
Hma1.2p1_0327F.1_g126410 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 2.4e-15 86.7 219 49.8
Potri.017G143215 Populus trichocarpa HOM05D002831 ORTHO05D004341 3.1e-15 86.3 219 40.6
QL09p012962 Quercus lobata HOM05D002831 ORTHO05D004341 3.1e-15 86.3 223 49.3
Sopen03g003930 Solanum pennellii HOM05D002831 ORTHO05D004341 3.1e-15 86.3 218 39.0
Ciclev10005857m.g Citrus clementina HOM05D002831 ORTHO05D004341 4.0e-15 85.9 226 39.8
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 4.0e-15 85.9 209 41.1
CiPaw.06G003100 Carya illinoinensis HOM05D002831 ORTHO05D004341 6.9e-15 85.1 214 50.9
CiPaw.06G003300 Carya illinoinensis HOM05D002831 ORTHO05D004341 9.0e-15 84.7 214 50.9
Solyc06g036250.2 Solanum lycopersicum HOM05D002831 ORTHO05D004341 1.5e-14 84.0 166 38.6
MSTRG.74 Avicennia marina HOM05D002831 ORTHO05D004341 3.4e-14 82.8 220 39.1
CAN.G204.16 Capsicum annuum HOM05D002831 ORTHO05D004341 5.8e-14 82.0 206 39.3
AUR62021127 Chenopodium quinoa HOM05D002831 ORTHO05D004341 5.8e-14 82.0 216 35.2
Prupe.2G300400 Prunus persica HOM05D002831 ORTHO05D004341 5.8e-14 82.0 226 45.6
THA.LOC104800271 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 5.8e-14 82.0 210 34.8
Gohir.D08G109800 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.3e-13 80.9 204 41.7
EL10Ac3g05428 Beta vulgaris HOM05D002831 ORTHO05D004341 1.7e-13 80.5 207 41.1
MD07G1278500 Malus domestica HOM05D002831 ORTHO05D004341 1.7e-13 80.5 223 48.4
Nitab4.5_0000248g0010 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.7e-13 80.5 160 38.8
AUR62031417 Chenopodium quinoa HOM05D002831 ORTHO05D004341 2.2e-13 80.1 216 34.7
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 3.8e-13 79.3 200 41.0
Gorai.007G012600 Gossypium raimondii HOM05D002831 ORTHO05D004341 3.8e-13 79.3 216 38.4
Gohir.A11G011900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 6.4e-13 78.6 217 38.2
Sp7g23710 Schrenkiella parvula HOM05D002831 ORTHO05D004341 6.4e-13 78.6 209 35.9
TWI39G0102 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 6.4e-13 78.6 212 36.8
MSTRG.8713 Avicennia marina HOM05D002831 ORTHO05D004341 8.4e-13 78.2 214 48.1
SGA_v2.0_scaffold113G31691 Striga asiatica HOM05D002831 ORTHO05D008967 8.4e-13 78.2 217 38.2
Gohir.A08G098200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.1e-12 77.8 200 42.0
FvH4_7g30190 Fragaria vesca HOM05D002831 ORTHO05D004341 1.9e-12 77.0 221 48.4
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.9e-12 77.0 221 48.4
Gohir.D11G011100 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.9e-12 77.0 216 38.0
FAN03G0359 Fragaria x ananassa HOM05D002831 ORTHO05D004341 2.4e-12 76.6 222 48.2
FAN03G0781 Fragaria x ananassa HOM05D002831 ORTHO05D004341 2.4e-12 76.6 221 48.4
FAN10G3196 Fragaria x ananassa HOM05D002831 ORTHO05D004341 3.2e-12 76.3 221 48.4
RcHm_v2.0_Chr1g0378241 Rosa chinensis HOM05D002831 ORTHO05D004341 4.2e-12 75.9 212 49.5
Phvul.004G109000 Phaseolus vulgaris HOM05D002831 ORTHO05D004341 7.1e-12 75.1 213 46.5
Ah.13g069150 Amaranthus hybridus HOM05D002831 ORTHO05D004341 9.3e-12 74.7 204 32.8
AT4G25670 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 9.3e-12 74.7 218 34.9
FAN01G0089 Fragaria x ananassa HOM05D002831 ORTHO05D004341 9.3e-12 74.7 221 48.0
SGA_v2.0_scaffold60G21104 Striga asiatica HOM05D002831 ORTHO05D004341 9.3e-12 74.7 208 37.0
Glyma.09G132500 Glycine max HOM05D002831 ORTHO05D004341 1.6e-11 73.9 207 40.1
Aqoxy7G00243 Aquilegia oxysepala HOM05D002831 ORTHO05D004341 2.1e-11 73.6 227 37.9
Lalb_Chr03g0034811 Lupinus albus HOM05D002831 ORTHO05D004341 2.1e-11 73.6 206 49.0
MD01G1207900 Malus domestica HOM05D002831 ORTHO05D004341 2.1e-11 73.6 227 47.6
Thhalv10027473m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 3.5e-11 72.8 210 34.3
AL7G27390 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 4.6e-11 72.4 214 34.1
AL7G27410 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 4.6e-11 72.4 217 34.1
Glyma.16G179300 Glycine max HOM05D002831 ORTHO05D004341 4.6e-11 72.4 213 46.5
CARHR233110 Cardamine hirsuta HOM05D002831 ORTHO05D004341 6.0e-11 72.0 212 35.8
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 7.9e-11 71.6 216 44.4
Thhalv10026278m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 7.9e-11 71.6 207 33.3
PGR042G3073 Punica granatum HOM05D002831 ORTHO05D004341 7.9e-11 71.6 219 39.7
vmacro09817 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 7.9e-11 71.6 116 53.4
VMungo0464G0591 Vigna mungo HOM05D002831 ORTHO05D004341 1.0e-10 71.2 213 45.5
BcaC06g32789 Brassica carinata HOM05D002831 ORTHO05D004341 1.3e-10 70.9 213 34.3
CiPaw.12G018300 Carya illinoinensis HOM05D002831 ORTHO05D004341 1.8e-10 70.5 160 37.5
Haze_00039 Corylus avellana HOM05D002831 ORTHO05D004341 1.8e-10 70.5 157 37.6
MBI11_g04751_MAGBIO Magnolia biondii HOM05D002831 ORTHO05D004341 1.8e-10 70.5 200 50.0
Carub.0007s1530 Capsella rubella HOM05D002831 ORTHO05D004341 2.3e-10 70.1 216 33.8
Migut.F01087 Erythranthe guttata HOM05D002831 ORTHO05D004341 2.3e-10 70.1 202 37.6
Lj5g0008853 Lotus japonicus HOM05D002831 ORTHO05D004341 2.3e-10 70.1 198 48.5
Glyma.10G231300 Glycine max HOM05D002831 ORTHO05D004341 3.9e-10 69.3 120 59.2
Glyma.20G162500 Glycine max HOM05D002831 ORTHO05D004341 8.7e-10 68.2 120 57.5
AT4G25690 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 1.1e-09 67.8 216 33.8
Psat6g196360 Pisum sativum HOM05D002831 ORTHO05D004341 1.1e-09 67.8 205 45.9
Sp7g23730 Schrenkiella parvula HOM05D002831 ORTHO05D004341 1.1e-09 67.8 211 34.6
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 2.5e-09 66.6 209 33.5
TPR.G7753 Trifolium pratense HOM05D002831 ORTHO05D004341 2.5e-09 66.6 204 42.2
BraA01t01645Z Brassica rapa HOM05D002831 ORTHO05D004341 3.3e-09 66.2 217 33.2
BolC1t02046H Brassica oleracea HOM05D002831 ORTHO05D004341 5.6e-09 65.5 207 32.9
BolC1t02049H Brassica oleracea HOM05D002831 ORTHO05D004341 5.6e-09 65.5 221 38.0
A01p16930 Brassica napus HOM05D002831 ORTHO05D004341 7.4e-09 65.1 205 33.2
C01p21210 Brassica napus HOM05D002831 ORTHO05D004341 9.6e-09 64.7 205 32.7
Medtr1g100090 Medicago truncatula HOM05D002831 ORTHO05D004341 9.6e-09 64.7 120 60.8
Sc19g0001290 Simmondsia chinensis HOM05D002831 ORTHO05D004341 1.3e-08 64.3 210 37.1
VMungo0720G1018 Vigna mungo HOM05D002831 ORTHO05D004341 1.3e-08 64.3 202 49.5
CARHR233150 Cardamine hirsuta HOM05D002831 ORTHO05D004341 1.6e-08 63.9 206 32.5
BraA01t01648Z Brassica rapa HOM05D002831 ORTHO05D004341 2.1e-08 63.5 223 31.8
BraA02t06237Z Brassica rapa HOM05D002831 ORTHO05D004341 2.8e-08 63.2 195 33.3
ATR0661G020 Amborella trichopoda HOM05D002831 ORTHO05D004341 3.7e-08 62.8 179 34.6
Carub.0008s1268 Capsella rubella HOM05D002831 ORTHO05D004341 3.7e-08 62.8 196 32.1
Lalb_Chr21g0305221 Lupinus albus HOM05D002831 ORTHO05D004341 3.7e-08 62.8 79 77.2
AL8G27020 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 4.8e-08 62.4 199 31.2
SGA_v2.0_scaffold10G05296 Striga asiatica HOM05D002831 ORTHO05D004341 8.1e-08 61.6 217 31.3
HPP92_022210 Vanilla planifolia HOM05D002831 ORTHO05D004341 8.1e-08 61.6 83 45.8
HPP92_022231 Vanilla planifolia HOM05D002831 ORTHO05D004341 8.1e-08 61.6 83 45.8
Lalb_Chr06g0161301 Lupinus albus HOM05D002831 ORTHO05D004341 1.1e-07 61.2 194 48.5
Aa31LG3G8920 Aethionema arabicum HOM05D002831 ORTHO05D004341 1.4e-07 60.8 198 32.8
AT5G52550 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 1.4e-07 60.8 199 29.6
Ca_10728_v3 Cicer arietinum L. HOM05D002831 ORTHO05D004341 1.4e-07 60.8 87 74.7
HPP92_022228 Vanilla planifolia HOM05D002831 ORTHO05D004341 1.4e-07 60.8 83 45.8
BNapus_Darmor_BZH_scaffold_232p00070 Brassica napus HOM05D002831 ORTHO05D004341 1.8e-07 60.5 194 31.4
CsaV3_3G017430 Cucumis sativus L. HOM05D002831 ORTHO05D004341 1.8e-07 60.5 214 47.2
Lalb_Chr02g0141231 Lupinus albus HOM05D002831 ORTHO05D004341 3.1e-07 59.7 185 40.0
Sed0001656 Sechium edule HOM05D002831 ORTHO05D004341 3.1e-07 59.7 216 47.2
Zm00001eb229390 Zea mays HOM05D002831 ORTHO05D004341 4.0e-07 59.3 220 44.1
ClCG05G008340 Citrullus lanatus HOM05D002831 ORTHO05D004341 6.9e-07 58.5 210 49.5
MELO3C006940.2 Cucumis melo HOM05D002831 ORTHO05D004341 9.0e-07 58.2 211 49.3
Os02g0104200 Oryza sativa ssp. japonica HOM05D002831 ORTHO05D004341 9.0e-07 58.2 79 83.5
BraA03t14689Z Brassica rapa HOM05D000048 ORTHO05D000445 1.5e-06 57.4 98 50.0
unitig_0.g2470 Utricularia gibba HOM05D002831 ORTHO05D004341 1.5e-06 57.4 215 28.4
SEGI_15574 Sequoiadendron giganteum HOM05D002831 ORTHO05D004341 2.6e-06 56.6 94 52.1
Sed0011382 Sechium edule HOM05D002831 ORTHO05D004341 5.8e-06 55.5 221 46.6


User provided reference genes

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