Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 0.0e+00 1199.5 634 100.0
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 4.3e-185 652.1 756 52.6
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 2.0e-166 590.1 665 55.3
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 8.4e-157 558.1 723 49.8
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 5.7e-153 545.4 642 53.6
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 7.4e-153 545.0 627 53.1
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 4.8e-152 542.3 699 50.5
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 1.8e-146 523.9 689 49.6
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 1.8e-143 513.8 711 48.4
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 6.9e-143 511.9 705 47.0
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 3.8e-141 506.1 703 48.1
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 6.7e-138 495.4 703 45.7
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 2.0e-137 493.8 562 54.6
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 2.9e-133 479.9 722 44.9
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 8.5e-133 478.4 695 46.0
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.9e-132 477.2 695 46.8
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 4.2e-132 476.1 716 45.1
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 7.2e-132 475.3 720 45.4
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 9.4e-132 474.9 705 44.4
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 8.0e-131 471.9 710 45.2
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 8.0e-131 471.9 685 46.1
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 1.4e-130 471.1 695 46.0
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 2.3e-130 470.3 705 45.1
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.1e-129 468.0 681 45.4
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 3.3e-129 466.5 695 45.3
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 5.7e-129 465.7 697 45.6
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.3e-128 464.5 701 45.4
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 1.7e-128 464.2 688 45.5
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 4.8e-128 462.6 695 44.7
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 6.3e-128 462.2 722 44.7
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 8.2e-128 461.8 699 43.9
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 1.6e-126 457.6 689 44.7
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 1.6e-126 457.6 723 43.6
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.0e-126 457.2 654 46.6
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 2.6e-126 456.8 706 44.1
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 3.5e-126 456.4 657 45.5
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 2.9e-125 453.4 697 43.6
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 6.5e-125 452.2 765 42.1
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 8.5e-125 451.8 647 45.4
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 1.9e-124 450.7 702 42.9
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.9e-124 450.7 690 44.2
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 2.5e-124 450.3 668 44.2
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 2.7e-123 446.8 700 42.9
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 2.7e-123 446.8 696 42.7
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 2.7e-123 446.8 704 42.9
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 8.0e-123 445.3 713 43.8
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 6.8e-122 442.2 705 43.4
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 8.8e-122 441.8 704 42.0
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 5.7e-121 439.1 704 43.6
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 7.5e-121 438.7 683 43.8
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 1.7e-120 437.6 645 44.7
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 3.7e-120 436.4 645 44.0
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 4.8e-120 436.0 690 43.3
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.4e-119 434.5 696 43.8
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 2.4e-119 433.7 687 43.8
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 5.4e-119 432.6 680 42.9
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.4e-119 432.6 705 44.1
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 9.1e-119 431.8 699 42.5
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 7.7e-118 428.7 647 44.8
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 5.5e-116 422.5 713 42.4
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 1.6e-115 421.0 712 42.6
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 2.7e-115 420.2 702 43.0
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 2.7e-115 420.2 696 42.8
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 4.7e-115 419.5 718 42.6
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 6.1e-115 419.1 690 41.0
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 1.4e-114 417.9 638 43.1
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 1.8e-114 417.5 694 42.7
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 1.2e-113 414.8 692 42.2
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 3.4e-113 413.3 679 43.0
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 5.7e-113 412.5 644 43.6
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 1.3e-112 411.4 704 41.8
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.1e-111 408.3 792 38.8
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 3.1e-111 406.8 710 41.5
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.3e-109 401.4 706 41.6
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 3.8e-109 399.8 695 41.9
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.1e-108 398.3 706 41.8
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.5e-108 396.0 676 42.8
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 7.2e-108 395.6 680 40.3
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 1.2e-107 394.8 630 41.7
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 2.8e-107 393.7 594 43.4
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.6e-107 393.3 711 41.2
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 1.0e-106 391.7 689 39.6
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 2.3e-106 390.6 660 41.2
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 6.8e-106 389.0 699 39.9
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 8.9e-106 388.7 642 40.8
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 1.2e-105 388.3 684 39.9
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 2.6e-105 387.1 687 39.6
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 5.7e-105 386.0 773 39.1
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 5.7e-105 386.0 695 40.1
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 7.5e-105 385.6 536 49.4
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 2.2e-104 384.0 617 42.8
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 2.9e-104 383.6 693 38.1
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 7.0e-103 379.0 602 42.4
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 1.2e-102 378.3 485 48.5
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.6e-102 377.9 697 39.0
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 2.7e-102 377.1 353 57.8
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.7e-101 374.4 695 41.0
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 2.3e-101 374.0 685 38.4
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 3.9e-101 373.2 667 40.3
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 2.5e-100 370.5 389 52.4
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 1.2e-99 368.2 648 42.1
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.8e-98 364.4 620 41.8
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 5.2e-98 362.8 684 39.2
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 8.9e-98 362.1 708 37.7
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 3.4e-97 360.1 823 36.6
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 4.4e-97 359.8 755 38.5
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 4.9e-96 356.3 650 38.9
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.2e-95 352.1 519 44.9
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 9.2e-95 352.1 576 41.1
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 1.1e-92 345.1 627 37.6
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.5e-92 344.0 649 40.4
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 4.3e-92 343.2 625 39.8
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 1.1e-90 338.6 694 37.0
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 1.1e-90 338.6 495 44.6
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 5.2e-90 336.3 693 36.9
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 2.0e-89 334.3 659 38.5
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 5.8e-89 332.8 630 38.3
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 3.2e-87 327.0 636 36.0
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 2.1e-86 324.3 650 36.9
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 6.0e-86 322.8 441 45.1
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 7.8e-86 322.4 304 55.6
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 1.0e-85 322.0 722 36.3
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.9e-84 317.8 294 60.2
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 2.8e-83 313.9 636 35.2
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 8.1e-83 312.4 597 38.7
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 4.0e-82 310.1 648 36.1
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 2.0e-81 307.8 650 34.9
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 4.4e-81 306.6 602 37.4
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 6.4e-80 302.8 642 35.2
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 1.1e-79 302.0 321 54.2
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.1e-79 302.0 615 35.3
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 1.9e-79 301.2 641 33.7
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 2.4e-79 300.8 715 34.8
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 3.2e-79 300.4 471 39.7
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 5.4e-79 299.7 649 36.1
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 1.7e-77 294.7 641 35.6
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 3.9e-77 293.5 634 34.9
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 1.9e-76 291.2 637 34.7
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 9.6e-76 288.9 663 33.9
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 2.8e-75 287.3 636 33.2
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 6.2e-75 286.2 544 37.5
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 5.2e-74 283.1 290 54.1
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 2.0e-73 281.2 661 33.1
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 7.6e-73 279.3 542 38.0
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.3e-69 267.7 304 49.7
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 6.6e-69 266.2 327 47.7
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 5.6e-68 263.1 439 40.8
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.0e-65 254.6 649 33.6
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 6.4e-64 249.6 701 33.5
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.7e-61 241.5 243 49.4
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 6.6e-61 239.6 248 48.4
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.4e-57 227.3 678 33.2
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.0e-53 215.7 139 74.1
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 2.0e-49 201.4 142 72.5
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.2e-41 175.6 275 44.4
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.3e-40 172.2 210 47.6
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 3.3e-36 157.5 149 56.4
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 3.8e-32 144.1 241 37.8
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.1e-31 142.5 411 36.3
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 1.6e-30 138.7 349 30.1
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 2.0e-28 131.7 401 31.9
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 4.8e-27 127.1 438 26.7
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 5.9e-25 120.2 193 44.6
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 4.2e-23 114.0 104 61.5
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.1e-18 99.4 67 71.6
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 3.5e-17 94.4 442 30.8
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 1.2e-14 85.9 430 29.8
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 6.1e-14 83.6 421 25.9
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.8e-13 82.0 66 65.2
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 2.3e-13 81.6 88 51.1
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.4e-10 72.4 55 63.6
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 5.9e-09 67.0 118 39.8
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 2.2e-08 65.1 63 55.6
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 8.5e-08 63.2 51 62.7
HPP92_001477 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.5e-07 61.6 56 53.6
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 6.1e-06 57.0 147 32.7


User provided reference genes

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