Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 0.0e+00 1206.0 675 100.0
Lsat_1_v5_gn_2_130181 Lactuca sativa HOM05D003765 ORTHO05D004561 3.3e-207 725.7 697 64.3
ECA238G0747 Erigeron canadensis HOM05D003765 ORTHO05D004561 1.1e-173 614.4 748 59.1
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 1.3e-136 491.1 718 47.6
ECA232G3914 Erigeron canadensis HOM05D003765 ORTHO05D004561 1.6e-108 397.9 633 46.3
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 3.0e-88 330.5 733 38.3
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 2.7e-84 317.4 751 38.6
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 1.9e-82 311.2 716 38.0
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 6.8e-80 302.8 776 36.1
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 8.1e-73 279.3 734 36.0
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 4.0e-72 276.9 736 35.3
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 4.4e-71 273.5 769 36.0
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 2.2e-70 271.2 779 35.7
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 2.2e-70 271.2 728 37.4
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 4.9e-70 270.0 676 35.9
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 6.4e-70 269.6 676 35.8
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 6.4e-70 269.6 681 35.1
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.1e-69 268.9 676 35.8
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 4.1e-69 266.9 730 37.0
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.2e-68 265.4 675 35.1
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.1e-68 264.6 677 35.0
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 3.5e-68 263.8 733 35.3
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 6.0e-68 263.1 724 36.5
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.0e-67 262.3 675 35.0
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 1.7e-67 261.5 743 34.6
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 3.9e-67 260.4 735 34.6
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 1.1e-66 258.8 738 34.1
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 1.5e-66 258.5 755 34.0
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 1.9e-66 258.1 751 32.5
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 2.1e-65 254.6 717 35.0
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 2.8e-65 254.2 724 36.2
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 8.1e-65 252.7 791 33.4
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 2.4e-64 251.1 736 34.6
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 4.0e-64 250.4 758 33.8
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 4.4e-63 246.9 577 38.1
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 9.9e-63 245.7 700 33.9
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 4.9e-62 243.4 663 35.6
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 1.4e-61 241.9 732 33.7
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 1.4e-61 241.9 733 36.0
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 1.9e-61 241.5 619 35.4
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 1.9e-61 241.5 739 33.3
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 2.4e-61 241.1 761 33.5
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 5.4e-61 240.0 714 32.9
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 1.2e-60 238.8 672 35.4
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 3.5e-60 237.3 714 33.1
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 6.0e-60 236.5 642 35.5
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 1.0e-59 235.7 777 33.2
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 2.3e-59 234.6 603 36.5
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 2.3e-59 234.6 737 33.4
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 8.7e-59 232.6 719 35.3
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 3.3e-58 230.7 728 35.4
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 3.3e-58 230.7 682 35.0
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 4.7e-57 226.9 801 31.6
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 4.7e-57 226.9 645 35.2
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 6.2e-57 226.5 729 34.3
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 1.4e-56 225.3 744 32.5
HanXRQChr15g0486221 Helianthus annuus HOM05D003765 ORTHO05D004561 6.9e-56 223.0 499 39.1
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 1.2e-55 222.2 723 32.1
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 1.3e-54 218.8 650 32.6
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 1.7e-54 218.4 771 32.7
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 1.7e-54 218.4 766 31.7
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 2.2e-54 218.0 687 32.0
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 1.9e-53 214.9 715 32.2
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 7.1e-53 213.0 769 31.6
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 3.5e-52 210.7 734 31.2
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 7.8e-52 209.5 782 31.1
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 1.9e-50 204.9 728 33.0
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 2.5e-50 204.5 779 31.5
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 5.6e-50 203.4 776 30.3
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 9.6e-50 202.6 725 31.9
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 1.3e-49 202.2 668 32.6
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 1.6e-49 201.8 677 35.2
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 1.6e-49 201.8 710 31.7
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 1.1e-48 199.1 710 30.3
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 1.8e-48 198.4 696 31.3
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 3.1e-48 197.6 664 34.0
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 1.2e-47 195.7 674 33.4
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 1.2e-47 195.7 684 31.6
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 2.0e-47 194.9 674 33.5
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 2.6e-47 194.5 795 31.8
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 3.4e-47 194.1 685 33.3
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 2.9e-46 191.0 710 31.4
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 1.1e-45 189.1 666 29.6
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 1.4e-45 188.7 750 31.7
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 3.2e-45 187.6 668 31.6
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 4.2e-45 187.2 575 32.2
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 7.1e-45 186.4 693 32.2
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 9.3e-45 186.0 704 31.2
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 9.3e-45 186.0 746 30.4
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 1.2e-44 185.7 683 30.2
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 6.7e-43 179.9 702 30.2
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 1.1e-42 179.1 674 31.2
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 1.1e-42 179.1 722 31.0
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 7.4e-42 176.4 650 32.8
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 1.3e-41 175.6 708 30.4
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 1.6e-41 175.3 776 31.7
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 1.1e-40 172.6 725 30.6
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 1.1e-40 172.6 674 32.3
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 1.1e-40 172.6 674 28.8
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 2.4e-40 171.4 582 32.8
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 3.1e-40 171.0 628 31.7
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 2.0e-39 168.3 585 34.2
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 1.3e-38 165.6 635 31.2
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 2.2e-38 164.9 708 30.1
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 4.2e-37 160.6 522 34.3
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 7.1e-37 159.8 689 30.9
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 7.1e-37 159.8 666 30.3
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 2.1e-36 158.3 732 29.9
SalBow4G0450 Salvia bowleyana HOM05D003765 ORTHO05D004561 5.1e-35 153.7 626 30.0
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 6.7e-35 153.3 499 34.5
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 8.7e-35 152.9 667 30.4
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 8.7e-35 152.9 635 32.3
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 1.5e-34 152.1 707 29.3
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 2.5e-34 151.4 669 29.9
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 1.3e-33 149.1 696 29.6
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 2.1e-33 148.3 705 26.7
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 2.1e-33 148.3 625 31.0
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 8.2e-33 146.4 716 30.6
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 1.1e-32 146.0 638 29.6
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 1.3e-30 139.0 642 31.3
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 1.1e-29 136.0 660 28.5
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 2.2e-25 121.7 652 26.5
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 1.2e-23 115.9 256 40.2
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 6.5e-22 110.2 657 28.9
BcaB02g09632 Brassica carinata HOM05D003765 ORTHO05D004561 1.4e-21 109.0 627 28.5
Dinv28507 Davidia involucrata HOM05D003765 ORTHO05D004561 1.9e-21 108.6 163 42.9
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 3.2e-21 107.8 269 33.1
ATR0661G439 Amborella trichopoda HOM05D003765 ORTHO05D004561 9.4e-21 106.3 778 26.5
AL8G26150 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 9.4e-21 106.3 667 27.3
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 1.6e-20 105.5 679 27.0
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea HOM05D003765 ORTHO05D004561 7.9e-20 103.2 727 30.3
BcaB03g12466 Brassica carinata HOM05D003765 ORTHO05D004561 1.1e-18 99.4 324 32.4
Sp7g23450 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.5e-18 99.0 289 33.2
BolC8t48608H Brassica oleracea HOM05D003765 ORTHO05D004561 1.9e-18 98.6 326 31.9
BcaC07g38188 Brassica carinata HOM05D003765 ORTHO05D004561 7.4e-18 96.7 329 32.5
A08p21190 Brassica napus HOM05D003765 ORTHO05D004561 7.4e-18 96.7 330 33.3
BcaB08g35538 Brassica carinata HOM05D003765 ORTHO05D004561 9.7e-18 96.3 258 34.5
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 1.3e-17 95.9 655 24.4
A10p09680 Brassica napus HOM05D003765 ORTHO05D004561 2.8e-17 94.7 426 30.0
BraA08t34069Z Brassica rapa HOM05D003765 ORTHO05D004561 2.8e-17 94.7 330 33.3
C09p41340 Brassica napus HOM05D003765 ORTHO05D004561 4.8e-17 94.0 347 30.8
BolC9t57009H Brassica oleracea HOM05D003765 ORTHO05D004561 1.1e-16 92.8 379 29.6
BraA10t43049Z Brassica rapa HOM05D003765 ORTHO05D004561 1.4e-16 92.4 426 29.8
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 1.8e-16 92.0 377 29.2
SEGI_17592 Sequoiadendron giganteum HOM05D003765 ORTHO05D004561 4.1e-16 90.9 174 29.3
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 5.3e-16 90.5 640 25.5
AT4G25430 Arabidopsis thaliana HOM05D003765 ORTHO05D023707 1.5e-15 89.0 260 31.5
unitig_22.g5225 Utricularia gibba HOM05D003765 ORTHO05D004561 4.5e-15 87.4 171 34.5
Aa31LG6G8690 Aethionema arabicum HOM05D003765 ORTHO05D004561 5.9e-15 87.0 290 33.1
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 7.7e-15 86.7 677 25.0
AL7G27690 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 7.7e-15 86.7 328 32.0
Carub.0008s1189 Capsella rubella HOM05D003765 ORTHO05D004561 1.3e-14 85.9 539 31.4
ClCG01G005340 Citrullus lanatus HOM05D003765 ORTHO05D004561 5.0e-14 84.0 256 34.8
A09p07540 Brassica napus HOM05D003765 ORTHO05D004561 6.5e-14 83.6 309 31.1
C09p08430 Brassica napus HOM05D003765 ORTHO05D004561 8.5e-14 83.2 336 31.5
Carub.0007s1558 Capsella rubella HOM05D003765 ORTHO05D004561 1.1e-13 82.8 207 36.2
BraA09t36408Z Brassica rapa HOM05D003765 ORTHO05D004561 4.2e-13 80.9 297 32.3
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 1.6e-12 79.0 242 35.1
BcaC04g23427 Brassica carinata HOM05D003765 ORTHO05D004561 3.6e-12 77.8 172 43.0
BolC9t53753H Brassica oleracea HOM05D003765 ORTHO05D004561 3.6e-12 77.8 321 30.2
CsaV3_5G005590 Cucumis sativus L. HOM05D003765 ORTHO05D004561 1.5e-10 72.4 258 30.6
Lalb_Chr19g0131141 Lupinus albus HOM05D003765 ORTHO05D004561 7.4e-10 70.1 134 38.1
VMungo0464G2043 Vigna mungo HOM05D003765 ORTHO05D004561 9.7e-10 69.7 228 30.7
BcaNung01408 Brassica carinata HOM05D003765 ORTHO05D004561 2.8e-09 68.2 320 30.0
BcaNung01409 Brassica carinata HOM05D003765 ORTHO05D004561 2.8e-09 68.2 320 30.0
ATR0759G019 Amborella trichopoda HOM05D002769 ORTHO05D001913 6.3e-09 67.0 167 28.1
SEGI_17249 Sequoiadendron giganteum HOM05D001693 ORTHO05D001588 9.1e-08 63.2 175 26.9
Mapoly0151s0019 Marchantia polymorpha HOM05D002515 ORTHO05D002722 1.5e-07 62.4 179 24.6
VMungo0251G2630 Vigna mungo HOM05D003765 ORTHO05D004561 1.5e-07 62.4 81 50.6
VMungo0100G0003 Vigna mungo HOM05D003765 ORTHO05D004561 3.4e-07 61.2 81 49.4
SEGI_23141 Sequoiadendron giganteum HOM05D002769 ORTHO05D001913 4.5e-07 60.8 172 23.3
arahy.Tifrunner.gnm1.ann1.XAW92V Arachis hypogaea HOM05D003765 ORTHO05D004561 2.2e-06 58.5 734 27.9
DCAR_025439 Daucus carota HOM05D001693 ORTHO05D001588 6.5e-06 57.0 175 31.4
Migut.J00378 Erythranthe guttata HOM05D002036 ORTHO05D001913 6.5e-06 57.0 157 28.0
Sed0026899 Sechium edule HOM05D003765 ORTHO05D004561 6.5e-06 57.0 596 24.2


User provided reference genes

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