Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 9.4e-85 317.0 182 100.0
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 1.1e-61 240.4 174 77.0
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 2.4e-48 196.1 175 62.9
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 4.1e-48 195.3 179 62.0
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 2.0e-47 193.0 185 61.6
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 3.5e-47 192.2 186 59.1
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 4.6e-47 191.8 169 64.5
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 6.0e-47 191.4 179 65.4
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 1.0e-46 190.7 174 62.6
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 2.3e-46 189.5 184 57.6
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 3.9e-46 188.7 183 59.6
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 1.1e-45 187.2 184 59.2
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 1.5e-45 186.8 180 58.9
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 1.9e-45 186.4 126 73.8
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 1.9e-45 186.4 185 60.5
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 2.5e-45 186.0 175 60.0
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 5.6e-45 184.9 139 73.4
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 7.3e-45 184.5 175 60.6
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 9.5e-45 184.1 173 59.5
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 9.5e-45 184.1 127 72.4
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 9.5e-45 184.1 164 66.5
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 9.5e-45 184.1 188 60.1
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 1.2e-44 183.7 167 59.9
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 2.1e-44 183.0 182 59.9
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 2.8e-44 182.6 180 63.9
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 4.7e-44 181.8 179 59.2
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 1.8e-43 179.9 177 58.8
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.8e-43 179.9 179 58.7
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 1.8e-43 179.9 178 57.3
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 2.3e-43 179.5 182 58.8
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 2.3e-43 179.5 182 58.8
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 6.8e-43 177.9 126 73.8
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 1.2e-42 177.2 188 56.4
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 1.2e-42 177.2 125 71.2
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 1.5e-42 176.8 155 62.6
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 1.5e-42 176.8 180 57.8
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 2.0e-42 176.4 128 71.1
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 2.0e-42 176.4 126 69.8
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 3.4e-42 175.6 181 53.0
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 5.8e-42 174.9 131 71.0
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 7.5e-42 174.5 128 69.5
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 9.8e-42 174.1 174 59.2
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 1.3e-41 173.7 127 70.1
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 1.7e-41 173.3 161 55.9
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 2.9e-41 172.6 169 56.8
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 3.7e-41 172.2 180 56.1
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 4.9e-41 171.8 125 69.6
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 4.9e-41 171.8 132 68.2
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 8.3e-41 171.0 125 68.0
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.1e-40 170.6 176 57.4
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 1.4e-40 170.2 181 53.0
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 1.9e-40 169.9 176 55.1
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 3.2e-40 169.1 125 67.2
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 3.2e-40 169.1 181 56.4
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 3.2e-40 169.1 189 63.0
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 3.2e-40 169.1 125 68.0
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 5.4e-40 168.3 178 51.7
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 5.4e-40 168.3 178 51.7
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 5.4e-40 168.3 185 54.6
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 9.2e-40 167.5 178 51.1
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 9.2e-40 167.5 177 56.5
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 9.2e-40 167.5 128 70.3
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 1.2e-39 167.2 178 52.2
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.2e-39 167.2 125 71.2
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 1.2e-39 167.2 175 60.6
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 2.1e-39 166.4 128 68.0
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 4.6e-39 165.2 173 56.6
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 1.0e-38 164.1 115 73.9
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 2.3e-38 162.9 172 54.7
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 3.0e-38 162.5 125 67.2
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 3.0e-38 162.5 185 50.3
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 5.1e-38 161.8 125 64.8
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 6.6e-38 161.4 179 53.6
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 1.1e-37 160.6 132 61.4
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 1.1e-37 160.6 132 61.4
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.1e-37 160.6 172 57.0
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 1.1e-37 160.6 129 68.2
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.9e-37 159.8 176 55.1
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 3.3e-37 159.1 171 55.0
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 3.3e-37 159.1 183 53.6
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 5.6e-37 158.3 129 67.4
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 9.5e-37 157.5 184 53.8
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 4.7e-36 155.2 154 52.6
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 1.8e-35 153.3 128 60.9
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 4.0e-35 152.1 178 50.6
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 6.8e-35 151.4 185 50.3
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 1.2e-34 150.6 130 63.1
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 3.4e-34 149.1 154 61.0
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 4.4e-34 148.7 182 58.2
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 2.2e-33 146.4 123 62.6
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 1.9e-32 143.3 114 64.9
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 1.0e-30 137.5 131 55.7
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 2.3e-30 136.3 88 76.1
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 3.0e-30 136.0 87 75.9
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 3.0e-30 136.0 88 76.1
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 5.1e-30 135.2 126 51.6
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 1.1e-29 134.0 87 74.7
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 2.5e-29 132.9 130 51.5
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 1.1e-27 127.5 151 54.3
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 2.7e-23 112.8 127 52.0
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 5.1e-22 108.6 126 48.4
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.9e-21 106.7 130 53.1
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 1.6e-20 103.6 189 40.7
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 9.0e-19 97.8 128 47.7
Lsat_1_v5_gn_7_115640 Lactuca sativa HOM05D018034 ORTHO05D006583 1.1e-16 90.9 106 54.7
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 7.9e-15 84.7 113 45.1
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 1.9e-13 80.1 114 39.5
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 3.6e-12 75.9 108 39.8
Lsat_1_v5_gn_4_144040 Lactuca sativa HOM05D018034 ORTHO05D019256 4.5e-10 68.9 76 53.9
Lsat_1_v5_gn_5_57621 Lactuca sativa HOM05D018034 ORTHO05D019256 4.5e-10 68.9 76 53.9
Lsat_1_v5_gn_5_146901 Lactuca sativa HOM05D018034 ORTHO05D019256 1.7e-09 67.0 76 53.9
Lsat_1_v5_gn_2_56241 Lactuca sativa HOM05D018034 ORTHO05D019256 1.1e-08 64.3 94 44.7
Lsat_1_v5_gn_1_72660 Lactuca sativa HOM05D018034 ORTHO05D019256 5.1e-06 55.5 77 46.8


User provided reference genes

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