Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 1.2e-53 213.0 118 100.0
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 8.6e-47 190.3 118 88.1
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 6.0e-40 167.5 118 78.0
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 3.0e-39 165.2 118 76.3
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 1.4e-33 146.4 120 69.2
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 7.8e-32 140.6 124 66.9
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 1.7e-31 139.4 126 65.9
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 5.1e-31 137.9 111 64.0
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 6.6e-31 137.5 114 65.8
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 1.5e-30 136.3 122 63.1
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 1.5e-30 136.3 118 65.3
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 1.9e-30 136.0 105 71.4
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 2.5e-30 135.6 127 63.0
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 2.5e-30 135.6 125 64.0
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 3.3e-30 135.2 110 69.1
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 5.6e-30 134.4 117 63.2
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 2.1e-29 132.5 123 65.9
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 4.7e-29 131.3 124 62.1
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 8.1e-29 130.6 118 62.7
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.4e-28 129.8 106 71.7
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.8e-28 129.4 123 64.2
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 2.4e-28 129.0 117 60.7
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 5.2e-28 127.9 122 62.3
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 6.9e-28 127.5 121 60.3
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 6.9e-28 127.5 118 61.9
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 1.5e-27 126.3 122 59.8
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 1.5e-27 126.3 118 60.2
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 2.0e-27 125.9 121 59.5
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 2.0e-27 125.9 119 63.0
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 2.6e-27 125.6 127 59.1
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 9.9e-27 123.6 108 66.7
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 9.9e-27 123.6 119 60.5
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 1.3e-26 123.2 118 61.0
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 1.7e-26 122.9 122 60.7
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 1.7e-26 122.9 119 59.7
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 1.7e-26 122.9 119 59.7
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 1.7e-26 122.9 114 57.9
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 2.2e-26 122.5 108 65.7
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 3.8e-26 121.7 121 60.3
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 3.8e-26 121.7 114 62.3
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 3.8e-26 121.7 79 78.5
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 3.8e-26 121.7 121 58.7
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 4.9e-26 121.3 107 66.4
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 6.4e-26 120.9 119 55.5
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 8.4e-26 120.6 123 53.7
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 8.4e-26 120.6 118 61.9
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 8.4e-26 120.6 118 58.5
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 1.1e-25 120.2 110 58.2
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.1e-25 120.2 118 58.5
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 1.4e-25 119.8 119 60.5
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 1.9e-25 119.4 118 58.5
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 1.9e-25 119.4 118 58.5
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 1.9e-25 119.4 116 60.3
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 2.4e-25 119.0 104 61.5
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 2.4e-25 119.0 112 61.6
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 3.2e-25 118.6 119 57.1
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 3.2e-25 118.6 123 60.2
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 4.2e-25 118.2 69 78.3
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 5.4e-25 117.9 113 63.7
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 5.4e-25 117.9 122 59.8
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 9.3e-25 117.1 112 61.6
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 1.2e-24 116.7 121 59.5
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 1.2e-24 116.7 98 68.4
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 1.2e-24 116.7 120 60.8
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.6e-24 116.3 106 61.3
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 1.6e-24 116.3 100 64.0
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 2.1e-24 115.9 112 60.7
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 2.1e-24 115.9 110 57.3
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.7e-24 115.5 67 80.6
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.5e-24 115.2 117 57.3
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 3.5e-24 115.2 113 59.3
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 4.6e-24 114.8 123 56.9
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 4.6e-24 114.8 118 57.6
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 7.8e-24 114.0 123 56.1
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 2.3e-23 112.5 113 58.4
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 5.1e-23 111.3 113 59.3
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 6.6e-23 110.9 123 60.2
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 1.1e-22 110.2 64 73.4
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 1.5e-22 109.8 120 53.3
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 4.8e-21 104.8 107 63.6
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 6.2e-21 104.4 124 53.2
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 6.2e-21 104.4 119 47.9
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 8.1e-21 104.0 80 68.8
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 1.1e-20 103.6 116 54.3
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 1.1e-20 103.6 115 56.5
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 1.4e-20 103.2 113 54.9
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 1.4e-20 103.2 100 60.0
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 1.8e-20 102.8 137 51.1
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.8e-20 102.8 67 74.6
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.8e-20 102.8 67 74.6
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 1.8e-20 102.8 73 65.8
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 3.1e-20 102.1 98 53.1
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 3.1e-20 102.1 76 65.8
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 5.3e-20 101.3 113 54.9
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 9.0e-20 100.5 93 63.4
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 2.0e-19 99.4 102 58.8
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 4.5e-19 98.2 120 50.8
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 5.8e-19 97.8 106 59.4
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 1.7e-18 96.3 98 58.2
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 2.1e-16 89.4 118 44.1
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 2.1e-16 89.4 124 48.4
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 2.7e-16 89.0 122 51.6
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 2.7e-16 89.0 121 48.8
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 2.3e-15 85.9 122 50.0
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 5.1e-15 84.7 109 51.4
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 1.1e-14 83.6 127 48.8
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 4.8e-13 78.2 117 41.9
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 6.2e-13 77.8 100 51.0
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.6e-11 72.4 100 49.0
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 7.6e-11 70.9 113 45.1
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 9.9e-11 70.5 68 54.4
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 8.4e-10 67.4 111 48.6
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 1.1e-09 67.0 81 49.4
SEGI_16463 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 4.6e-08 61.6 68 51.5
Peaxi162Scf01313g00026 Petunia axillaris HOM05D007113 ORTHO05D008859 7.4e-06 54.3 31 77.4


User provided reference genes

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