Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 2.6e-92 342.4 226 100.0
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 2.2e-59 233.0 204 65.7
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 3.2e-58 229.2 232 60.8
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 3.2e-42 176.0 240 48.3
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 6.7e-40 168.3 254 46.1
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 1.5e-39 167.2 133 72.9
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 4.3e-39 165.6 240 46.7
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 4.1e-37 159.1 232 46.6
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 5.3e-37 158.7 132 66.7
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 6.9e-37 158.3 133 66.9
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 6.9e-37 158.3 133 66.2
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 3.4e-36 156.0 125 70.4
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 4.5e-36 155.6 133 64.7
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 7.7e-36 154.8 131 67.9
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 1.3e-35 154.1 130 66.9
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 1.3e-35 154.1 133 63.2
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 1.3e-35 154.1 134 65.7
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 2.2e-35 153.3 134 64.9
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 3.8e-35 152.5 237 43.9
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 5.0e-35 152.1 134 64.2
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 5.0e-35 152.1 134 64.2
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 5.0e-35 152.1 134 64.2
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 6.5e-35 151.8 138 61.6
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 6.5e-35 151.8 127 67.7
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 8.5e-35 151.4 134 64.9
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.1e-34 151.0 127 65.4
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 1.4e-34 150.6 228 49.6
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 1.9e-34 150.2 126 65.1
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 1.9e-34 150.2 131 63.4
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 1.9e-34 150.2 131 65.6
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 3.2e-34 149.4 138 60.9
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 3.2e-34 149.4 131 62.6
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 4.2e-34 149.1 131 62.6
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 4.2e-34 149.1 131 62.6
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 7.2e-34 148.3 131 62.6
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 9.4e-34 147.9 133 63.9
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 9.4e-34 147.9 127 65.4
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 1.6e-33 147.1 120 65.0
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 2.1e-33 146.7 127 64.6
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 2.7e-33 146.4 138 63.0
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 2.7e-33 146.4 131 64.1
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 3.6e-33 146.0 130 62.3
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 3.6e-33 146.0 130 61.5
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 4.7e-33 145.6 133 61.7
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 4.7e-33 145.6 132 62.1
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 6.1e-33 145.2 134 61.2
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 1.4e-32 144.1 128 64.1
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 1.4e-32 144.1 109 73.4
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 1.4e-32 144.1 109 73.4
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 1.4e-32 144.1 131 60.3
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 1.8e-32 143.7 257 41.6
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 3.0e-32 142.9 128 59.4
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 3.0e-32 142.9 254 42.1
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 3.0e-32 142.9 133 60.9
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 3.9e-32 142.5 121 62.8
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 6.7e-32 141.7 126 64.3
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 1.1e-31 141.0 130 60.8
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 1.1e-31 141.0 120 65.0
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 1.5e-31 140.6 134 61.2
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 2.6e-31 139.8 137 58.4
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 3.3e-31 139.4 228 40.8
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 5.7e-31 138.7 131 58.0
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 5.7e-31 138.7 134 61.9
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 7.4e-31 138.3 119 60.5
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 9.7e-31 137.9 119 60.5
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 1.7e-30 137.1 126 62.7
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 1.7e-30 137.1 119 59.7
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 1.7e-30 137.1 133 58.6
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 2.2e-30 136.7 118 60.2
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 2.2e-30 136.7 132 56.1
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 2.2e-30 136.7 132 56.1
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 2.2e-30 136.7 119 58.8
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 2.8e-30 136.3 117 60.7
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 2.8e-30 136.3 117 60.7
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 2.8e-30 136.3 117 60.7
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 2.8e-30 136.3 117 60.7
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 3.7e-30 136.0 119 59.7
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 4.8e-30 135.6 132 56.1
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 4.8e-30 135.6 133 55.6
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 6.3e-30 135.2 119 58.0
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 6.3e-30 135.2 126 57.1
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 6.3e-30 135.2 238 40.8
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 1.4e-29 134.0 119 57.1
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 1.8e-29 133.7 135 57.8
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.4e-29 133.3 132 57.6
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 4.1e-29 132.5 125 59.2
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 4.1e-29 132.5 136 57.4
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 5.3e-29 132.1 123 62.6
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 5.3e-29 132.1 256 40.6
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 7.0e-29 131.7 258 40.3
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 1.6e-28 130.6 122 60.7
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 1.6e-28 130.6 122 60.7
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.6e-28 130.6 122 60.7
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 2.0e-28 130.2 115 64.3
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.0e-28 130.2 122 59.8
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 3.5e-28 129.4 116 62.9
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 4.5e-28 129.0 133 58.6
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 7.7e-28 128.3 128 56.2
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 1.0e-27 127.9 140 53.6
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 1.3e-27 127.5 120 62.5
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 9.4e-26 121.3 253 38.7
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 5.3e-21 105.5 84 61.9
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 2.0e-20 103.6 89 65.2
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 1.3e-19 100.9 94 58.5
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 2.9e-19 99.8 94 59.6
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 2.5e-18 96.7 119 50.4
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 4.4e-15 85.9 116 44.8
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 4.8e-14 82.4 80 58.8
Lsat_1_v5_gn_7_113640 Lactuca sativa HOM05D007823 ORTHO05D000174 1.8e-08 63.9 65 55.4
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 5.7e-07 58.9 72 54.2
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 9.8e-07 58.2 102 33.3


User provided reference genes

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