Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 2.1e-153 547.4 902 100.0
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 1.8e-75 288.5 229 65.1
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 8.9e-51 206.5 209 54.1
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 4.9e-49 200.7 210 50.0
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 1.3e-46 192.6 218 49.5
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 3.9e-46 191.0 207 48.3
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 1.1e-45 189.5 214 47.2
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 1.5e-45 189.1 218 47.7
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 5.6e-45 187.2 232 49.1
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 1.2e-44 186.0 178 53.9
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 1.6e-44 185.7 206 49.0
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 1.6e-44 185.7 191 50.8
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 2.8e-44 184.9 197 50.3
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 4.7e-44 184.1 191 50.3
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 4.7e-44 184.1 208 50.5
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 1.4e-43 182.6 214 48.6
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 2.3e-43 181.8 200 46.5
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 3.1e-43 181.4 197 51.3
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 4.0e-43 181.0 189 52.9
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 4.0e-43 181.0 206 48.1
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 5.2e-43 180.6 208 50.5
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 5.2e-43 180.6 144 58.3
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 1.2e-42 179.5 206 47.6
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 1.2e-42 179.5 221 44.8
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 4.4e-42 177.6 192 45.3
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 4.4e-42 177.6 221 46.2
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 4.4e-42 177.6 221 46.2
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 4.4e-42 177.6 223 45.3
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 5.8e-42 177.2 186 47.8
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 9.8e-42 176.4 187 47.6
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 1.7e-41 175.6 197 49.2
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 6.4e-41 173.7 220 45.5
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 8.3e-41 173.3 142 61.3
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 1.4e-40 172.6 214 47.2
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 1.9e-40 172.2 135 63.7
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 2.4e-40 171.8 217 43.8
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 9.2e-40 169.9 194 44.3
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 2.1e-39 168.7 191 45.0
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 2.7e-39 168.3 150 54.0
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 4.6e-39 167.5 192 45.3
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 7.8e-39 166.8 209 46.9
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 3.0e-38 164.9 192 45.3
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 3.3e-37 161.4 181 45.3
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 7.3e-37 160.2 192 46.9
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 1.6e-36 159.1 118 65.3
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 2.1e-36 158.7 202 43.6
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 1.4e-35 156.0 178 48.3
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 5.8e-34 150.6 231 40.3
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 9.9e-34 149.8 208 42.3
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 1.3e-33 149.4 118 62.7
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 1.7e-33 149.1 190 42.6
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 2.2e-33 148.7 176 48.3
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 2.9e-33 148.3 181 43.6
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 7.1e-32 143.7 186 46.2
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 1.2e-31 142.9 187 44.4
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 2.1e-31 142.1 118 60.2
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 2.7e-31 141.7 117 55.6
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 3.5e-31 141.4 227 40.5
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 6.0e-31 140.6 180 45.6
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 3.0e-30 138.3 118 56.8
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 3.0e-30 138.3 118 57.6
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.9e-30 137.9 118 56.8
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 5.1e-30 137.5 118 56.8
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 6.6e-30 137.1 120 55.8
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 6.6e-30 137.1 117 54.7
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 6.2e-28 130.6 118 54.2
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 6.2e-28 130.6 118 54.2
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 1.1e-27 129.8 189 43.4
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 3.1e-27 128.3 118 52.5
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 3.4e-26 124.8 121 52.1
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 3.4e-26 124.8 121 52.1
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 3.4e-26 124.8 114 53.5
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 3.4e-26 124.8 185 41.6
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 3.8e-25 121.3 195 41.0
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 6.0e-23 114.0 103 53.4
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 1.5e-21 109.4 118 44.9
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 8.1e-20 103.6 119 57.1
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 5.2e-19 100.9 91 50.5
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 2.2e-17 95.5 88 54.5
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 2.9e-17 95.1 82 51.2
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 2.7e-15 88.6 73 57.5
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 2.7e-15 88.6 102 45.1
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 3.5e-15 88.2 118 39.0
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 6.0e-15 87.4 77 53.2
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 3.0e-14 85.1 67 53.7
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 6.6e-14 84.0 80 50.0
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 3.3e-13 81.6 86 44.2
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 7.3e-13 80.5 76 46.1
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 7.3e-13 80.5 85 42.4
Migut.I00272 Erythranthe guttata HOM05D007595 ORTHO05D009570 2.4e-08 65.5 63 47.6
ATR0665G577 Amborella trichopoda HOM05D007595 ORTHO05D009570 2.1e-07 62.4 73 41.1
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 2.3e-06 58.9 121 33.9
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 3.0e-06 58.5 122 36.9


User provided reference genes

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