Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 5.6e-66 254.2 135 100.0
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 2.3e-35 152.5 107 68.2
Lsat_1_v5_gn_2_102881 Lactuca sativa HOM05D007333 ORTHO05D008874 1.1e-34 150.2 145 55.9
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 4.5e-23 111.7 115 53.0
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 3.8e-22 108.6 109 53.2
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 5.1e-19 98.2 117 45.3
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 1.3e-17 93.6 123 43.9
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 8.1e-17 90.9 115 45.2
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 1.8e-16 89.7 114 42.1
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 4.0e-16 88.6 119 47.1
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 9.0e-16 87.4 112 49.1
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 1.5e-15 86.7 116 43.1
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 5.8e-15 84.7 111 45.9
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 7.6e-15 84.3 122 45.9
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 9.9e-15 84.0 117 38.5
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 1.3e-14 83.6 109 44.0
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 1.3e-14 83.6 119 45.4
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 1.3e-14 83.6 108 45.4
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 2.2e-14 82.8 102 43.1
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 2.9e-14 82.4 125 40.0
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 3.8e-14 82.0 113 38.1
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 4.9e-14 81.6 130 40.8
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 8.4e-14 80.9 128 39.8
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 8.4e-14 80.9 122 40.2
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 3.2e-13 79.0 140 41.4
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 5.5e-13 78.2 98 43.9
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 7.1e-13 77.8 94 45.7
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 7.1e-13 77.8 139 33.1
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 9.3e-13 77.4 79 46.8
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 1.2e-12 77.0 138 42.0
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 1.2e-12 77.0 102 43.1
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 1.2e-12 77.0 120 39.2
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 1.2e-12 77.0 117 40.2
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 1.6e-12 76.6 107 43.0
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 4.6e-12 75.1 121 37.2
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 6.0e-12 74.7 132 34.8
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 1.3e-11 73.6 117 36.8
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 1.8e-11 73.2 71 50.7
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 1.8e-11 73.2 136 33.8
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 2.3e-11 72.8 126 38.9
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 3.9e-11 72.0 99 42.4
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 5.1e-11 71.6 71 50.7
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 6.7e-11 71.2 56 55.4
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 8.7e-11 70.9 114 37.7
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 8.7e-11 70.9 116 38.8
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 8.7e-11 70.9 115 36.5
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 8.7e-11 70.9 138 36.2
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 1.1e-10 70.5 120 36.7
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 1.1e-10 70.5 122 35.2
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 1.5e-10 70.1 57 54.4
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 1.5e-10 70.1 57 54.4
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 1.5e-10 70.1 61 54.1
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 1.9e-10 69.7 71 45.1
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 1.9e-10 69.7 61 49.2
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 2.5e-10 69.3 57 52.6
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 2.5e-10 69.3 90 43.3
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 3.3e-10 68.9 57 52.6
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 3.3e-10 68.9 129 32.6
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 4.3e-10 68.6 120 37.5
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 5.6e-10 68.2 127 35.4
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 5.6e-10 68.2 71 49.3
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 7.4e-10 67.8 103 38.8
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 7.4e-10 67.8 138 34.8
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 1.3e-09 67.0 133 35.3
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 1.6e-09 66.6 133 39.1
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 2.1e-09 66.2 94 43.6
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 2.1e-09 66.2 102 40.2
A04p07130 Brassica napus HOM05D007333 ORTHO05D008874 2.8e-09 65.9 60 51.7
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 4.8e-09 65.1 118 35.6
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.2e-09 64.7 102 33.3
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.2e-09 64.7 102 33.3
CSS0002382 Camellia sinensis var. sinensis HOM05D007333 ORTHO05D008874 1.1e-08 63.9 104 38.5
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.1e-08 63.9 102 33.3
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 1.4e-08 63.5 53 50.9
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.4e-08 63.5 102 32.4
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 2.4e-08 62.8 116 32.8
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 5.3e-08 61.6 109 37.6
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 6.9e-08 61.2 126 32.5
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 9.0e-08 60.8 128 34.4
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 9.0e-08 60.8 95 36.8
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 1.5e-07 60.1 104 37.5
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 5.8e-07 58.2 131 32.8
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 5.8e-07 58.2 135 29.6
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 5.8e-07 58.2 113 29.2
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 1.7e-06 56.6 116 35.3
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 2.2e-06 56.2 118 33.1
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 2.2e-06 56.2 121 33.9
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 2.9e-06 55.8 122 36.9
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 2.9e-06 55.8 140 30.7
TPR.G2540 Trifolium pratense HOM05D007333 ORTHO05D008874 2.9e-06 55.8 59 44.1
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 6.5e-06 54.7 112 33.9
HPP92_009761 Vanilla planifolia HOM05D065211 ORTHO05D008874 6.5e-06 54.7 63 38.1


User provided reference genes

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