Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0455071 Helianthus annuus HOM05D000735 ORTHO05D004669 3.6e-71 271.6 143 100.0
HanXRQChr16g0515311 Helianthus annuus HOM05D000735 ORTHO05D004669 2.1e-31 139.4 120 65.0
ECA247G3031 Erigeron canadensis HOM05D000735 ORTHO05D004669 7.5e-29 131.0 120 61.7
Lsat_1_v5_gn_4_64520 Lactuca sativa HOM05D000735 ORTHO05D004669 6.0e-26 121.3 121 60.3
Actinidia01459 Actinidia chinensis HOM05D000735 ORTHO05D004669 3.1e-22 109.0 120 53.3
Oeu025985.1 Olea europaea HOM05D000641 ORTHO05D007351 4.0e-22 108.6 114 54.4
Atru.chr1.2250_Atru.chr1.2251 Acer truncatum HOM05D000735 ORTHO05D004669 1.2e-21 107.1 120 51.7
Oeu025986.1 Olea europaea HOM05D000735 ORTHO05D004669 1.5e-21 106.7 120 51.7
CSS0035227 Camellia sinensis var. sinensis HOM05D000735 ORTHO05D004669 2.0e-21 106.3 120 51.7
Cc09_g00020 Coffea canephora HOM05D000735 ORTHO05D004669 3.4e-21 105.5 120 51.7
Nn1g08298 Nelumbo nucifera HOM05D000735 ORTHO05D004669 3.4e-21 105.5 120 51.7
Ciclev10018215m.g Citrus clementina HOM05D000735 ORTHO05D004669 5.8e-21 104.8 120 50.8
GSVIVG01019361001 Vitis vinifera HOM05D000735 ORTHO05D004669 7.5e-21 104.4 120 50.0
COL.COLO4_31970 Corchorus olitorius HOM05D000735 ORTHO05D004669 2.2e-20 102.8 120 49.2
MD10G1342600 Malus domestica HOM05D000735 ORTHO05D004669 4.9e-20 101.7 120 50.8
QL05p065759 Quercus lobata HOM05D000735 ORTHO05D004669 4.9e-20 101.7 123 48.8
Haze_07068 Corylus avellana HOM05D000735 ORTHO05D004669 6.4e-20 101.3 120 49.2
Gohir.A06G181100 Gossypium hirsutum HOM05D000735 ORTHO05D004669 6.4e-20 101.3 120 48.3
Gohir.D01G023800 Gossypium hirsutum HOM05D000735 ORTHO05D004669 6.4e-20 101.3 118 48.3
Gohir.D06G187900 Gossypium hirsutum HOM05D000735 ORTHO05D004669 6.4e-20 101.3 120 48.3
Gorai.010G220200 Gossypium raimondii HOM05D000735 ORTHO05D004669 6.4e-20 101.3 120 48.3
FvH4_3g00030 Fragaria vesca HOM05D000735 ORTHO05D004669 8.3e-20 100.9 121 48.8
Gorai.002G032300 Gossypium raimondii HOM05D000735 ORTHO05D004669 8.3e-20 100.9 118 47.5
Sc25g0001880 Simmondsia chinensis HOM05D000735 ORTHO05D004669 8.3e-20 100.9 120 50.8
Nitab4.5_0000276g0160 Nicotiana tabacum HOM05D000735 ORTHO05D004669 1.4e-19 100.1 125 48.0
Rhsim13G0137600 Rhododendron simsii HOM05D000735 ORTHO05D004669 1.4e-19 100.1 113 52.2
RcHm_v2.0_Chr5g0000031 Rosa chinensis HOM05D000735 ORTHO05D004669 1.4e-19 100.1 121 51.2
SalBow8G3892 Salvia bowleyana HOM05D000735 ORTHO05D004669 1.4e-19 100.1 120 50.0
TAR365G1081 Trochodendron aralioides HOM05D000735 ORTHO05D004669 1.4e-19 100.1 120 49.2
MD00G1208600 Malus domestica HOM05D000735 ORTHO05D004669 1.9e-19 99.8 120 50.0
Prupe.4G000200 Prunus persica HOM05D000735 ORTHO05D004669 1.9e-19 99.8 120 50.0
Aqoxy1G01335 Aquilegia oxysepala HOM05D000735 ORTHO05D004669 2.4e-19 99.4 120 49.2
Lj2A254G92 Lonicera japonica HOM05D000735 ORTHO05D004669 2.4e-19 99.4 120 50.0
TWI63G0350 Tripterygium wilfordii HOM05D000735 ORTHO05D004669 2.4e-19 99.4 120 48.3
CAN.G642.3 Capsicum annuum HOM05D000735 ORTHO05D004669 4.1e-19 98.6 123 48.0
Hma1.2p1_0394F.1_g143380 Hydrangea macrophylla HOM05D000735 ORTHO05D004669 4.1e-19 98.6 120 50.0
Potri.016G000200 Populus trichocarpa HOM05D000735 ORTHO05D004669 4.1e-19 98.6 120 48.3
Thecc.06G244900 Theobroma cacao HOM05D000735 ORTHO05D004669 4.1e-19 98.6 120 48.3
Migut.M01487 Erythranthe guttata HOM05D000735 ORTHO05D004669 5.4e-19 98.2 121 50.4
Nitab4.5_0000083g0040 Nicotiana tabacum HOM05D000735 ORTHO05D004669 5.4e-19 98.2 124 46.8
Duzib192G0339 Durio zibethinus HOM05D000735 ORTHO05D004669 7.0e-19 97.8 120 47.5
EL10Ac9g22942 Beta vulgaris HOM05D000735 ORTHO05D004669 1.2e-18 97.1 120 50.8
Manes.10G068400 Manihot esculenta HOM05D000735 ORTHO05D004669 1.2e-18 97.1 120 46.7
CDE06G1452 Ceratophyllum demersum HOM05D000735 ORTHO05D004669 1.6e-18 96.7 120 50.0
PGR042G3067 Punica granatum HOM05D000735 ORTHO05D004669 1.6e-18 96.7 126 46.8
FAN21G4060 Fragaria x ananassa HOM05D000735 ORTHO05D004669 2.1e-18 96.3 124 48.4
DCAR_022843 Daucus carota HOM05D000735 ORTHO05D004669 2.7e-18 95.9 123 48.0
arahy.Tifrunner.gnm1.ann1.MYF06S Arachis hypogaea HOM05D000735 ORTHO05D004669 3.5e-18 95.5 130 46.2
Solyc04g056600.4 Solanum lycopersicum HOM05D000735 ORTHO05D004669 6.0e-18 94.7 124 45.2
Sopen04g025520 Solanum pennellii HOM05D000735 ORTHO05D004669 6.0e-18 94.7 124 45.2
Eucgr.E04240 Eucalyptus grandis HOM05D000735 ORTHO05D004669 1.0e-17 94.0 127 48.8
Hund24367 Selenicereus undatus HOM05D000735 ORTHO05D004669 1.3e-17 93.6 117 49.6
arahy.Tifrunner.gnm1.ann1.JCJT2N Arachis hypogaea HOM05D000735 ORTHO05D004669 2.3e-17 92.8 127 45.7
PSO675G6844 Papaver somniferum HOM05D000735 ORTHO05D004669 2.3e-17 92.8 121 49.6
Ah.01g012230 Amaranthus hybridus HOM05D000735 ORTHO05D004669 3.0e-17 92.4 119 48.7
FAN25G1440 Fragaria x ananassa HOM05D000735 ORTHO05D004669 3.0e-17 92.4 124 46.8
Glyma.07G270400 Glycine max HOM05D000735 ORTHO05D004669 3.9e-17 92.0 122 47.5
VMungo0540G1324 Vigna mungo HOM05D000735 ORTHO05D004669 3.9e-17 92.0 125 46.4
vmacro03581 Vaccinium macrocarpon HOM05D000735 ORTHO05D004669 5.0e-17 91.7 126 46.8
PSO541G3261 Papaver somniferum HOM05D000735 ORTHO05D004669 8.6e-17 90.9 121 48.8
ATR0568G110 Amborella trichopoda HOM05D000735 ORTHO05D004669 1.5e-16 90.1 122 45.9
AUR62017691 Chenopodium quinoa HOM05D000735 ORTHO05D004669 1.5e-16 90.1 120 47.5
Glyma.09G018200 Glycine max HOM05D000735 ORTHO05D004669 1.9e-16 89.7 125 44.8
Glyma.15G124100 Glycine max HOM05D000735 ORTHO05D004669 1.9e-16 89.7 125 44.8
AUR62015223 Chenopodium quinoa HOM05D000735 ORTHO05D004669 5.6e-16 88.2 120 46.7
Psat1g172120 Pisum sativum HOM05D000735 ORTHO05D004669 5.6e-16 88.2 127 44.9
Ca_00788_v3 Cicer arietinum L. HOM05D000735 ORTHO05D004669 7.3e-16 87.8 131 44.3
Ca_11371_v3 Cicer arietinum L. HOM05D000735 ORTHO05D004669 7.3e-16 87.8 131 44.3
Gohir.A01G036500 Gossypium hirsutum HOM05D000735 ORTHO05D004669 9.5e-16 87.4 69 62.3
Lalb_Chr20g0119781 Lupinus albus HOM05D000735 ORTHO05D004669 1.2e-15 87.0 127 47.2
Medtr2g028230 Medicago truncatula HOM05D000735 ORTHO05D004669 2.1e-15 86.3 127 44.1
Phvul.006G134033 Phaseolus vulgaris HOM05D000735 ORTHO05D004669 2.1e-15 86.3 125 44.0
CsaV3_1G015620 Cucumis sativus L. HOM05D000735 ORTHO05D004669 3.6e-15 85.5 122 45.1
Phvul.003G089800 Phaseolus vulgaris HOM05D000735 ORTHO05D004669 3.6e-15 85.5 133 45.1
unitig_26.g10052 Utricularia gibba HOM05D000735 ORTHO05D004669 4.7e-15 85.1 120 42.5
HPP92_003015 Vanilla planifolia HOM05D000735 ORTHO05D004669 4.7e-15 85.1 121 45.5
HPP92_027541 Vanilla planifolia HOM05D000735 ORTHO05D004669 4.7e-15 85.1 121 45.5
ClCG01G011310 Citrullus lanatus HOM05D000735 ORTHO05D004669 8.1e-15 84.3 122 44.3
Thhalv10011392m.g Eutrema salsugineum HOM05D000735 ORTHO05D004669 8.1e-15 84.3 121 43.8
Oeu031375.1 Olea europaea HOM05D000735 ORTHO05D004669 8.1e-15 84.3 68 63.2
VMungo1215G1296 Vigna mungo HOM05D000735 ORTHO05D004669 1.1e-14 84.0 134 44.0
Sp1g41910 Schrenkiella parvula HOM05D000735 ORTHO05D004669 1.8e-14 83.2 128 43.8
Carub.0002s2649 Capsella rubella HOM05D000735 ORTHO05D004669 3.1e-14 82.4 120 41.7
THA.LOC104813594 Tarenaya hassleriana HOM05D000735 ORTHO05D004669 3.1e-14 82.4 121 43.0
CARHR073340 Cardamine hirsuta HOM05D000735 ORTHO05D004669 5.2e-14 81.6 121 42.1
Lj6g0025657 Lotus japonicus HOM05D000735 ORTHO05D004669 6.8e-14 81.3 134 42.5
AT1G54370 Arabidopsis thaliana HOM05D000735 ORTHO05D004669 1.2e-13 80.5 128 41.4
Lalb_Chr18g0057591 Lupinus albus HOM05D000735 ORTHO05D004669 2.0e-13 79.7 131 42.0
Carub.0001s4478 Capsella rubella HOM05D000735 ORTHO05D004669 2.6e-13 79.3 128 40.6
CARHR046050 Cardamine hirsuta HOM05D000735 ORTHO05D004669 2.6e-13 79.3 128 41.4
Thhalv10018385m.g Eutrema salsugineum HOM05D000735 ORTHO05D004669 2.6e-13 79.3 120 40.8
Os09g0286400 Oryza sativa ssp. japonica HOM05D000735 ORTHO05D004669 3.4e-13 79.0 120 42.5
Zm00001eb308990 Zea mays HOM05D000735 ORTHO05D004669 3.4e-13 79.0 120 43.3
AT1G79610 Arabidopsis thaliana HOM05D000735 ORTHO05D004669 4.4e-13 78.6 122 44.3
Sed0022776 Sechium edule HOM05D000735 ORTHO05D004669 5.8e-13 78.2 122 41.8
AL1G64590 Arabidopsis lyrata HOM05D000735 ORTHO05D004669 7.5e-13 77.8 127 40.9
Aa31LG4G1360 Aethionema arabicum HOM05D000735 ORTHO05D004669 1.3e-12 77.0 121 42.1
TPR.G10488 Trifolium pratense HOM05D000735 ORTHO05D004669 1.3e-12 77.0 133 45.1
A07p27040 Brassica napus HOM05D000290 ORTHO05D006513 1.7e-12 76.6 120 40.8
C06p29770 Brassica napus HOM05D000290 ORTHO05D006513 1.7e-12 76.6 120 40.8
BolC6t38138H Brassica oleracea HOM05D000290 ORTHO05D006513 1.7e-12 76.6 120 40.8
CiPaw.10G085400 Carya illinoinensis HOM05D000735 ORTHO05D004669 1.7e-12 76.6 128 41.4
BcaC08g47521 Brassica carinata HOM05D000735 ORTHO05D004669 3.7e-12 75.5 122 43.4
A07p44630 Brassica napus HOM05D000735 ORTHO05D004669 3.7e-12 75.5 122 43.4
C06p53470 Brassica napus HOM05D000735 ORTHO05D004669 3.7e-12 75.5 122 43.4
BolC6t40362H Brassica oleracea HOM05D000735 ORTHO05D004669 3.7e-12 75.5 122 43.4
BraA07t31972Z Brassica rapa HOM05D000735 ORTHO05D004669 3.7e-12 75.5 122 43.4
AL2G40300 Arabidopsis lyrata HOM05D000735 ORTHO05D004669 4.9e-12 75.1 122 42.6
MSTRG.7102 Avicennia marina HOM05D000735 ORTHO05D004669 4.9e-12 75.1 120 41.7
Sp5g34680 Schrenkiella parvula HOM05D000735 ORTHO05D004669 6.0e-10 68.2 118 42.4
Dinv04373 Davidia involucrata HOM05D000735 ORTHO05D004669 1.0e-09 67.4 84 48.8
arahy.Tifrunner.gnm1.ann1.3U55TZ Arachis hypogaea HOM05D000735 ORTHO05D004669 3.9e-09 65.5 128 39.8
arahy.Tifrunner.gnm1.ann1.LC1B8P Arachis hypogaea HOM05D000735 ORTHO05D004669 3.9e-09 65.5 128 39.8
Glyma.17G003550 Glycine max HOM05D000735 ORTHO05D004669 5.6e-08 61.6 85 43.5
Peaxi162Scf00529g00815 Petunia axillaris HOM05D000735 ORTHO05D004669 5.6e-08 61.6 88 43.2
Cpa.g.sc31.47 Carica papaya HOM05D000735 ORTHO05D004669 1.2e-07 60.5 84 44.0
BraA07t30348Z Brassica rapa HOM05D000290 ORTHO05D006513 4.7e-07 58.5 70 45.7
COL.COLO4_19351 Corchorus olitorius HOM05D000735 ORTHO05D004669 1.4e-06 57.0 105 37.1


User provided reference genes

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