Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 3.9e-105 384.8 192 100.0
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 2.0e-69 266.2 158 80.4
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.5e-61 240.0 169 68.0
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.5e-61 240.0 169 68.0
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 1.7e-60 236.5 166 65.7
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 5.0e-60 235.0 169 65.7
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 8.5e-60 234.2 169 65.7
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 1.9e-59 233.0 181 64.6
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 2.5e-59 232.6 192 63.0
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 2.5e-59 232.6 192 58.3
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 2.5e-59 232.6 169 65.1
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 3.2e-59 232.3 166 65.7
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 4.2e-59 231.9 192 63.0
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 4.2e-59 231.9 190 58.4
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 5.5e-59 231.5 176 61.4
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 5.5e-59 231.5 187 63.1
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 9.4e-59 230.7 167 67.7
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.2e-58 230.3 176 63.1
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 1.6e-58 229.9 167 64.1
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 2.1e-58 229.6 167 67.1
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 2.7e-58 229.2 166 62.0
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 4.6e-58 228.4 169 66.9
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 4.6e-58 228.4 170 61.2
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 6.1e-58 228.0 169 63.9
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 1.0e-57 227.3 180 60.6
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 1.4e-57 226.9 186 64.0
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 1.8e-57 226.5 179 61.5
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 1.8e-57 226.5 169 62.1
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.8e-57 226.5 169 62.1
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 2.3e-57 226.1 169 62.7
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 3.0e-57 225.7 169 62.7
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 3.9e-57 225.3 169 62.1
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 6.7e-57 224.6 193 57.5
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 6.7e-57 224.6 185 57.8
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 8.8e-57 224.2 192 56.8
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 1.1e-56 223.8 192 55.7
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 1.9e-56 223.0 176 59.7
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 1.9e-56 223.0 176 59.1
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 1.9e-56 223.0 169 62.7
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 3.3e-56 222.2 169 61.5
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 3.3e-56 222.2 169 60.9
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 4.3e-56 221.9 195 55.4
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 4.3e-56 221.9 182 57.7
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 4.3e-56 221.9 185 61.1
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 9.7e-56 220.7 171 60.2
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 9.7e-56 220.7 176 58.5
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 1.3e-55 220.3 171 60.2
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 1.7e-55 219.9 172 61.0
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 2.2e-55 219.5 169 60.4
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 2.8e-55 219.2 195 54.9
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 3.7e-55 218.8 163 65.0
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 4.8e-55 218.4 166 62.0
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 4.8e-55 218.4 166 62.7
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 6.3e-55 218.0 200 54.5
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 6.3e-55 218.0 166 61.4
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.4e-54 216.9 166 61.4
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 1.8e-54 216.5 175 61.1
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 1.8e-54 216.5 166 63.9
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 2.4e-54 216.1 159 65.4
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 2.6e-53 212.6 181 56.4
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 3.4e-53 212.2 156 64.7
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 3.4e-53 212.2 175 60.6
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 4.5e-53 211.8 169 58.0
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 1.0e-52 210.7 168 58.9
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 1.0e-52 210.7 159 63.5
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 1.3e-52 210.3 192 54.2
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 1.3e-52 210.3 174 62.6
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 5.0e-52 208.4 170 60.6
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 5.0e-52 208.4 170 62.4
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 5.5e-51 204.9 159 61.0
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 7.2e-51 204.5 172 57.0
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 1.2e-50 203.8 190 54.2
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 1.6e-50 203.4 159 60.4
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.6e-50 203.4 163 60.7
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 6.7e-49 198.0 244 46.3
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 1.3e-47 193.7 179 54.7
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 6.3e-47 191.4 147 59.9
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 1.8e-46 189.9 139 63.3
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 3.1e-46 189.1 188 54.3
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 7.7e-45 184.5 150 57.3
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 1.0e-44 184.1 162 52.5
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 5.0e-44 181.8 162 50.0
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 9.4e-43 177.6 159 54.1
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 1.4e-41 173.7 162 54.3
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 1.5e-40 170.2 167 49.7
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 4.4e-40 168.7 195 48.2
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 9.7e-40 167.5 157 49.7
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.3e-39 167.2 120 64.2
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 5.3e-38 161.8 126 63.5
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 9.1e-38 161.0 178 50.0
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 3.8e-36 155.6 126 61.9
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 2.5e-35 152.9 100 72.0
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 2.1e-34 149.8 185 40.0
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 2.1e-34 149.8 98 75.5
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 2.7e-34 149.4 143 53.1
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 3.6e-34 149.1 155 46.5
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 5.2e-33 145.2 111 62.2
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 5.2e-33 145.2 153 51.0
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 3.3e-32 142.5 133 50.4
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 4.8e-31 138.7 111 55.9
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 1.6e-29 133.7 128 50.8
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 2.7e-29 132.9 89 70.8
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 2.7e-29 132.9 94 71.3
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.0e-28 131.0 105 58.1
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 3.2e-27 125.9 94 68.1
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 4.2e-27 125.6 104 55.8
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 9.4e-27 124.4 117 49.6
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 9.4e-27 124.4 122 50.0
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 2.6e-24 116.3 132 47.0
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 2.8e-23 112.8 95 52.6
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.1e-22 109.4 76 72.4
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 1.3e-20 104.0 147 40.1
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 1.8e-17 93.6 117 39.3
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 8.3e-15 84.7 157 34.4
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.1e-14 82.8 75 56.0
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 2.9e-12 76.3 47 76.6
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 1.4e-09 67.4 68 51.5
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 7.0e-06 55.1 41 65.9


User provided reference genes

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