Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 5.8e-127 457.6 236 100.0
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 1.8e-99 366.3 234 80.3
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 1.8e-75 286.6 230 63.0
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 4.8e-73 278.5 210 74.3
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 3.4e-71 272.3 222 62.2
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 8.5e-70 267.7 228 59.6
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 1.1e-69 267.3 227 62.1
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.1e-69 267.3 222 60.8
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 1.4e-69 266.9 221 62.4
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 3.6e-68 262.3 225 62.7
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 6.1e-68 261.5 220 60.5
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 2.3e-67 259.6 225 59.1
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 8.8e-67 257.7 225 58.7
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 8.8e-67 257.7 225 58.7
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 2.0e-66 256.5 225 58.2
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 3.3e-66 255.8 224 57.6
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 9.7e-66 254.2 221 59.7
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 2.8e-65 252.7 222 56.8
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 2.8e-65 252.7 228 56.6
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 1.1e-64 250.8 222 59.0
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 1.4e-64 250.4 219 56.6
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 1.4e-64 250.4 222 59.0
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 3.1e-64 249.2 229 60.3
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 3.1e-64 249.2 224 54.5
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 5.3e-64 248.4 227 58.6
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 9.1e-64 247.7 224 54.5
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 9.1e-64 247.7 219 56.2
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.2e-63 247.3 222 59.0
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 2.0e-63 246.5 230 56.5
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 2.6e-63 246.1 220 55.9
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 4.5e-63 245.4 221 57.0
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 5.9e-63 245.0 223 55.2
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 5.9e-63 245.0 222 58.6
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 3.8e-62 242.3 229 53.3
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 5.0e-62 241.9 229 53.3
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 6.5e-62 241.5 228 57.5
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 1.1e-61 240.7 228 55.7
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 1.1e-61 240.7 222 57.7
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 1.9e-61 240.0 229 53.7
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 2.5e-61 239.6 229 52.4
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 5.5e-61 238.4 218 55.5
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 1.6e-60 236.9 210 57.6
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 8.0e-60 234.6 227 52.0
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.0e-59 234.2 235 55.3
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 5.2e-59 231.9 226 54.4
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 8.8e-59 231.1 225 53.3
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 8.8e-59 231.1 226 54.4
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 3.3e-58 229.2 223 53.4
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 2.2e-57 226.5 225 51.6
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 2.8e-57 226.1 228 51.8
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 2.8e-57 226.1 223 53.4
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 8.2e-57 224.6 228 51.8
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 1.8e-56 223.4 221 52.9
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 3.1e-56 222.6 218 53.7
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 5.3e-56 221.9 219 53.0
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 7.0e-56 221.5 235 53.2
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 1.6e-55 220.3 226 50.9
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 2.6e-55 219.5 219 52.1
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 4.5e-55 218.8 219 52.1
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 5.9e-55 218.4 217 51.6
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 2.2e-54 216.5 219 52.5
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 6.5e-54 214.9 196 55.1
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 6.5e-54 214.9 219 52.5
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 1.1e-53 214.2 219 50.2
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 1.5e-53 213.8 217 50.7
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 1.5e-53 213.8 218 52.3
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 1.5e-53 213.8 230 50.0
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 1.9e-53 213.4 225 48.4
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 1.9e-53 213.4 217 50.7
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 2.1e-52 209.9 221 48.4
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 2.7e-52 209.5 217 51.2
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 2.7e-52 209.5 217 49.8
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 3.6e-52 209.1 233 48.1
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 1.4e-51 207.2 217 50.7
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 2.3e-51 206.5 219 49.3
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 4.0e-51 205.7 217 50.7
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 4.0e-51 205.7 231 51.1
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 6.8e-51 204.9 217 49.3
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 8.8e-51 204.5 210 53.8
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 2.8e-49 199.5 224 47.3
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 1.1e-48 197.6 172 57.0
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 2.4e-48 196.4 231 48.1
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 2.4e-48 196.4 208 51.9
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 5.9e-47 191.8 246 44.7
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 1.0e-46 191.0 245 44.9
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 3.8e-46 189.1 227 47.1
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 3.8e-46 189.1 221 46.2
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 8.0e-44 181.4 253 43.9
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.8e-43 180.3 220 50.5
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 1.8e-43 180.3 316 43.0
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 4.0e-43 179.1 192 50.0
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 2.0e-42 176.8 189 48.7
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 3.7e-41 172.6 219 44.7
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 3.7e-41 172.6 178 53.4
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 8.3e-41 171.4 142 57.0
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 1.1e-40 171.0 201 49.8
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 9.1e-40 167.9 203 43.8
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.0e-38 164.5 222 44.1
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 1.5e-37 160.6 281 38.8
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 3.0e-35 152.9 177 48.0
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 3.4e-34 149.4 166 50.0
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 1.7e-33 147.1 200 41.0
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 3.7e-33 146.0 229 38.0
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 6.4e-33 145.2 296 33.8
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 1.1e-32 144.4 225 39.6
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 1.2e-31 141.0 88 70.5
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 3.3e-29 132.9 290 33.1
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 5.6e-29 132.1 73 80.8
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 9.5e-29 131.3 75 77.3
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 2.1e-28 130.2 143 47.6
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 2.3e-27 126.7 131 55.7
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 3.4e-26 122.9 226 35.8
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 6.4e-25 118.6 120 57.5
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 1.4e-24 117.5 222 34.2
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 7.0e-24 115.2 221 35.7
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 9.2e-24 114.8 257 35.0
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 9.2e-24 114.8 139 46.0
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 5.0e-22 109.0 109 51.4
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 8.9e-19 98.2 194 36.1
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 8.9e-19 98.2 77 68.8
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 1.7e-17 94.0 121 48.8
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 7.1e-16 88.6 194 32.5
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 2.6e-10 70.1 165 30.3
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 9.9e-10 68.2 57 66.7
BcaC05g24595 Brassica carinata HOM05D006082 ORTHO05D007616 4.9e-09 65.9 80 53.8
CAN.G34.12 Capsicum annuum HOM05D006082 ORTHO05D007616 3.5e-07 59.7 46 63.0


User provided reference genes

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