Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 2.8e-60 235.0 108 100.0
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 4.5e-34 147.9 106 68.9
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 3.6e-31 138.3 115 59.1
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 7.9e-31 137.1 92 65.2
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 3.0e-30 135.2 108 61.1
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 2.5e-29 132.1 100 59.0
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 3.3e-29 131.7 87 65.5
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 7.4e-29 130.6 102 60.8
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 1.3e-28 129.8 73 72.6
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.7e-28 129.4 104 58.7
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.8e-28 128.6 98 62.2
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 3.7e-28 128.3 104 57.7
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 3.7e-28 128.3 109 59.6
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 6.3e-28 127.5 70 81.4
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 6.3e-28 127.5 109 56.0
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 8.2e-28 127.1 103 58.3
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 1.8e-27 125.9 105 58.1
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 1.8e-27 125.9 106 58.5
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 3.1e-27 125.2 104 55.8
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 3.1e-27 125.2 78 67.9
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 3.1e-27 125.2 95 63.2
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 3.1e-27 125.2 99 59.6
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 3.1e-27 125.2 93 58.1
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 3.1e-27 125.2 92 62.0
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 4.1e-27 124.8 70 72.9
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 9.1e-27 123.6 71 71.8
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 9.1e-27 123.6 93 63.4
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 1.5e-26 122.9 102 53.9
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 1.5e-26 122.9 96 60.4
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 2.0e-26 122.5 74 70.3
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.6e-26 122.1 96 63.5
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 2.6e-26 122.1 72 72.2
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 3.4e-26 121.7 95 62.1
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 3.4e-26 121.7 70 72.9
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 3.4e-26 121.7 70 75.7
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 4.5e-26 121.3 72 70.8
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 4.5e-26 121.3 94 60.6
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 5.9e-26 120.9 94 60.6
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 5.9e-26 120.9 93 63.4
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 5.9e-26 120.9 87 62.1
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 5.9e-26 120.9 87 62.1
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 7.7e-26 120.6 93 57.0
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 7.7e-26 120.6 100 59.0
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 1.0e-25 120.2 83 63.9
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 1.3e-25 119.8 60 81.7
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.3e-25 119.8 69 73.9
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 1.3e-25 119.8 83 65.1
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 3.8e-25 118.2 83 65.1
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 5.0e-25 117.9 86 61.6
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 5.0e-25 117.9 76 68.4
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 8.5e-25 117.1 73 68.5
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 1.4e-24 116.3 103 55.3
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 1.9e-24 115.9 96 54.2
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 2.5e-24 115.5 117 50.4
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 3.2e-24 115.2 112 55.4
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 3.2e-24 115.2 94 56.4
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 5.5e-24 114.4 81 65.4
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 5.5e-24 114.4 84 63.1
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 5.5e-24 114.4 109 54.1
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 7.2e-24 114.0 71 67.6
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 9.4e-24 113.6 107 54.2
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 1.2e-23 113.2 89 58.4
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 1.2e-23 113.2 89 58.4
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 2.1e-23 112.5 91 57.1
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 2.7e-23 112.1 97 54.6
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 2.7e-23 112.1 72 68.1
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 3.6e-23 111.7 101 55.4
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 3.6e-23 111.7 75 62.7
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 3.6e-23 111.7 72 68.1
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 4.7e-23 111.3 85 63.5
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 4.7e-23 111.3 101 53.5
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 6.1e-23 110.9 67 70.1
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 6.1e-23 110.9 104 54.8
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 6.1e-23 110.9 101 49.5
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 6.1e-23 110.9 78 62.8
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 7.9e-23 110.5 62 71.0
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 7.9e-23 110.5 95 55.8
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 1.4e-22 109.8 94 53.2
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 1.4e-22 109.8 71 66.2
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 1.8e-22 109.4 101 53.5
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 2.3e-22 109.0 104 52.9
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 2.3e-22 109.0 72 63.9
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 3.0e-22 108.6 76 61.8
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 3.0e-22 108.6 65 72.3
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 3.0e-22 108.6 70 68.6
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 3.9e-22 108.2 75 61.3
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 5.1e-22 107.8 61 75.4
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 6.7e-22 107.5 71 67.6
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.1e-21 106.7 59 72.9
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 2.0e-21 105.9 68 67.6
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.6e-21 105.5 101 47.5
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 5.7e-21 104.4 101 50.5
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 2.2e-20 102.4 95 53.7
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 4.8e-20 101.3 85 55.3
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 6.3e-20 100.9 81 60.5
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 6.3e-20 100.9 97 49.5
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 3.1e-19 98.6 69 68.1
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 1.2e-18 96.7 51 74.5
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 1.2e-18 96.7 85 54.1
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.7e-15 85.5 97 40.2
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 6.1e-15 84.3 61 63.9
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 1.4e-14 83.2 55 61.8
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 2.4e-11 72.4 77 45.5
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 1.4e-06 56.6 65 47.7


User provided reference genes

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