Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 3.8e-38 161.0 81 100.0
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 1.0e-30 136.3 78 82.1
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 3.0e-27 124.8 78 76.9
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 2.6e-26 121.7 81 72.8
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 3.3e-21 104.8 80 66.2
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 2.8e-20 101.7 80 63.8
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 1.4e-19 99.4 83 59.0
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 3.1e-19 98.2 83 60.2
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 5.2e-19 97.4 83 60.2
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 1.2e-18 96.3 82 61.0
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 1.2e-18 96.3 82 61.0
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 1.2e-18 96.3 80 61.2
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 1.5e-18 95.9 83 60.2
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 1.5e-18 95.9 83 60.2
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 1.5e-18 95.9 83 60.2
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 1.5e-18 95.9 83 60.2
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 1.5e-18 95.9 83 60.2
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 2.6e-18 95.1 84 54.8
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 4.4e-18 94.4 80 57.5
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 5.8e-18 94.0 82 58.5
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 7.5e-18 93.6 83 57.8
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 7.5e-18 93.6 82 58.5
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 7.5e-18 93.6 83 59.0
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 9.8e-18 93.2 80 57.5
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 9.8e-18 93.2 84 54.8
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 2.9e-17 91.7 83 59.0
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 2.9e-17 91.7 80 58.8
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 2.9e-17 91.7 82 58.5
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 3.7e-17 91.3 83 55.4
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 3.7e-17 91.3 80 60.0
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 6.4e-17 90.5 80 58.8
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 6.4e-17 90.5 80 58.8
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 6.4e-17 90.5 80 57.5
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 1.1e-16 89.7 80 57.5
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 2.4e-16 88.6 83 56.6
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 2.4e-16 88.6 80 56.2
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 2.4e-16 88.6 83 56.6
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 2.4e-16 88.6 80 57.5
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 3.2e-16 88.2 80 56.2
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 5.4e-16 87.4 83 56.6
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 1.2e-15 86.3 80 57.5
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 1.6e-15 85.9 83 54.2
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 1.6e-15 85.9 83 54.2
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 1.6e-15 85.9 80 56.2
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 2.0e-15 85.5 83 53.0
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 2.0e-15 85.5 80 57.5
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 3.5e-15 84.7 80 56.2
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 4.6e-15 84.3 80 56.2
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 4.6e-15 84.3 83 53.0
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 6.0e-15 84.0 88 51.1
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 6.0e-15 84.0 82 54.9
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 6.0e-15 84.0 82 53.7
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 7.8e-15 83.6 80 56.2
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 7.8e-15 83.6 85 55.3
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.0e-14 83.2 83 53.0
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 1.0e-14 83.2 84 50.0
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 1.0e-14 83.2 82 53.7
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 1.3e-14 82.8 80 56.2
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 1.3e-14 82.8 80 53.8
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 1.7e-14 82.4 82 50.0
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 1.7e-14 82.4 79 53.2
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 3.9e-14 81.3 83 54.2
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 5.0e-14 80.9 83 51.8
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 6.6e-14 80.5 81 53.1
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 6.6e-14 80.5 77 53.2
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 8.6e-14 80.1 83 53.0
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.1e-13 79.7 80 55.0
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 1.1e-13 79.7 83 50.6
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 3.3e-13 78.2 83 53.0
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 3.3e-13 78.2 83 51.8
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 5.6e-13 77.4 80 52.5
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 5.6e-13 77.4 75 57.3
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 5.6e-13 77.4 82 50.0
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 5.6e-13 77.4 82 50.0
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 7.3e-13 77.0 82 48.8
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 7.3e-13 77.0 83 49.4
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 1.2e-12 76.3 83 49.4
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 1.6e-12 75.9 83 49.4
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 1.6e-12 75.9 83 51.8
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 2.1e-12 75.5 77 51.9
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 2.8e-12 75.1 85 47.1
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 8.1e-12 73.6 83 49.4
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 8.1e-12 73.6 83 48.2
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 1.1e-11 73.2 83 50.6
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 1.1e-11 73.2 84 52.4
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 1.4e-11 72.8 83 48.2
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 1.4e-11 72.8 84 52.4
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 2.3e-11 72.0 83 48.2
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 2.3e-11 72.0 86 51.2
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 4.0e-11 71.2 84 47.6
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 5.2e-11 70.9 71 47.9
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 6.8e-11 70.5 84 50.0
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 1.2e-10 69.7 80 48.8
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 1.5e-10 69.3 82 48.8
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.5e-10 69.3 81 43.2
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 9.9e-10 66.6 81 46.9
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.7e-09 65.9 75 45.3
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 2.2e-09 65.5 82 46.3
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 6.4e-09 63.9 86 44.2
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 6.4e-09 63.9 62 58.1
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 2.4e-08 62.0 79 43.0
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 3.2e-08 61.6 47 66.0
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 4.1e-08 61.2 79 41.8
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 2.7e-07 58.5 63 46.0
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 2.7e-07 58.5 48 62.5
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 3.9e-06 54.7 49 55.1
Sc06g0010190 Simmondsia chinensis HOM05D006634 ORTHO05D008282 6.6e-06 53.9 36 66.7


User provided reference genes

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