Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 0.0e+00 1231.1 629 100.0
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 2.3e-167 593.2 658 53.6
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 1.4e-159 567.4 567 54.1
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 1.1e-156 557.8 651 48.1
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 3.9e-154 549.3 579 50.4
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 1.9e-153 547.0 618 48.9
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 2.5e-153 546.6 562 50.5
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.6e-152 543.9 558 52.7
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 1.4e-151 540.8 566 55.8
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 5.3e-151 538.9 610 50.2
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 1.1e-148 531.2 598 49.5
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 6.0e-147 525.4 643 46.7
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 1.0e-146 524.6 643 47.4
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 7.4e-145 518.5 596 48.0
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 1.6e-144 517.3 556 49.5
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 3.7e-144 516.2 634 45.7
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 1.1e-143 514.6 587 48.0
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 6.9e-143 511.9 623 45.3
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 1.5e-142 510.8 589 47.7
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 7.6e-142 508.4 582 48.3
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 2.9e-141 506.5 599 47.1
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 3.8e-141 506.1 597 47.9
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 2.4e-140 503.4 634 47.0
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 4.2e-140 502.7 628 45.2
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 5.5e-140 502.3 583 48.0
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 9.3e-140 501.5 603 46.4
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 4.6e-139 499.2 586 46.8
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 2.5e-137 493.4 589 44.5
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 4.3e-137 492.7 602 46.5
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 4.8e-136 489.2 599 44.6
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 1.4e-135 487.6 492 54.1
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 2.4e-135 486.9 590 47.8
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 3.1e-135 486.5 645 44.8
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 4.5e-134 482.6 613 44.7
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 4.5e-134 482.6 584 46.7
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 7.6e-134 481.9 625 44.3
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 1.3e-133 481.1 605 46.1
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 9.3e-132 474.9 620 45.0
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 2.1e-131 473.8 629 44.4
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 3.5e-131 473.0 602 45.3
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 1.0e-130 471.5 544 46.7
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 1.9e-129 467.2 594 45.1
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 6.5e-125 452.2 610 42.5
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 1.1e-124 451.4 536 43.7
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 2.5e-124 450.3 602 43.4
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 3.2e-124 449.9 549 43.4
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 4.2e-124 449.5 575 42.1
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 5.5e-124 449.1 602 44.0
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 1.2e-123 448.0 552 47.1
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 1.2e-123 448.0 602 43.9
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 1.2e-123 448.0 627 43.1
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 1.6e-123 447.6 487 50.1
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 3.0e-122 443.4 539 45.5
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 3.9e-122 443.0 608 42.1
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 3.3e-121 439.9 616 43.5
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 9.7e-121 438.3 503 46.7
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 2.4e-119 433.7 582 43.5
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 1.0e-114 418.3 478 46.0
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 7.4e-113 412.1 471 46.5
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 3.7e-112 409.8 474 45.8
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 6.3e-112 409.1 478 45.6
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 9.1e-111 405.2 589 41.4
vmacro05580 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 1.9e-108 397.5 369 53.4
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 5.5e-108 396.0 424 49.8
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 1.5e-105 387.9 516 44.4
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 4.1e-103 379.8 445 44.7
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 3.5e-102 376.7 622 37.3
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 5.9e-102 375.9 637 37.8
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 7.7e-102 375.6 598 38.5
AUR62014551 Chenopodium quinoa HOM05D002617 ORTHO05D009035 1.0e-101 375.2 473 42.1
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 6.5e-101 372.5 416 48.1
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 2.5e-100 370.5 625 37.4
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 4.2e-100 369.8 412 48.5
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 6.1e-99 365.9 599 36.6
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.4e-98 364.8 615 38.9
Atru.chr8.789 Acer truncatum HOM05D002617 ORTHO05D009035 3.0e-98 363.6 362 49.4
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 4.0e-98 363.2 601 38.1
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 8.8e-98 362.1 525 41.9
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 1.5e-97 361.3 525 39.4
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 4.4e-97 359.8 623 36.3
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 5.7e-97 359.4 492 42.5
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 2.2e-96 357.5 554 38.4
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 8.2e-96 355.5 581 36.7
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 2.4e-95 354.0 628 36.6
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 2.4e-95 354.0 628 36.6
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 3.8e-93 346.7 603 36.8
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 3.8e-93 346.7 464 44.0
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 1.9e-92 344.4 603 36.7
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 1.8e-87 327.8 567 39.7
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 4.0e-82 310.1 386 48.7
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 5.2e-82 309.7 560 36.8
Lalb_Chr10g0092311 Lupinus albus HOM05D002617 ORTHO05D009035 3.4e-81 307.0 319 47.3
FAN02G3888 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.3e-77 295.0 280 50.0
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 8.6e-77 292.4 586 34.8
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 7.3e-76 289.3 508 40.4
CANSAT56G0222 Cannabis sativa HOM05D002617 ORTHO05D009035 9.5e-76 288.9 291 50.2
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 3.6e-75 287.0 565 36.8
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 8.0e-75 285.8 380 43.2
Actinidia18118 Actinidia chinensis HOM05D002617 ORTHO05D009035 6.4e-72 276.2 250 51.2
CANSAT56G4171 Cannabis sativa HOM05D002617 ORTHO05D009035 1.1e-58 232.3 239 48.1
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 2.7e-46 191.0 371 40.2
vmacro05579 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 3.4e-41 174.1 185 57.8
CiPaw.09G170800 Carya illinoinensis HOM05D002617 ORTHO05D009035 7.6e-41 172.9 223 48.4
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 8.4e-40 169.5 148 62.8
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 3.2e-39 167.5 324 39.5
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.2e-38 165.6 144 63.2
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea HOM05D002617 ORTHO05D009035 1.9e-36 158.3 226 45.6
MSTRG.23827 Avicennia marina HOM05D002617 ORTHO05D009035 4.2e-31 140.6 239 42.7
SMO116G0487 Selaginella moellendorffii HOM05D002617 ORTHO05D009035 4.2e-23 114.0 255 27.8
CBR_g48653 Chara braunii HOM05D001394 ORTHO05D001237 4.9e-16 90.5 258 24.8
Lalb_Chr10g0092331 Lupinus albus HOM05D002617 ORTHO05D009035 4.9e-16 90.5 132 47.7
Nn4g26093 Nelumbo nucifera HOM05D001650 ORTHO05D001592 1.6e-11 75.5 78 57.7
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.7e-11 74.3 59 54.2
Lalb_Chr10g0092321 Lupinus albus HOM05D002617 ORTHO05D009035 1.3e-08 65.9 90 44.4
TAR629G1810 Trochodendron aralioides HOM05D004423 ORTHO05D005464 6.1e-06 57.0 42 54.8


User provided reference genes

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