Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0451391 Helianthus annuus HOM05D005729 ORTHO05D007026 5.2e-78 294.7 188 100.0
Lsat_1_v5_gn_2_94961 Lactuca sativa HOM05D005729 ORTHO05D007026 1.1e-64 250.4 188 87.2
ECA238G1999 Erigeron canadensis HOM05D005729 ORTHO05D007026 2.0e-58 229.6 189 81.5
Actinidia19554 Actinidia chinensis HOM05D005729 ORTHO05D007026 6.4e-52 208.0 199 65.8
CiPaw.03G002600 Carya illinoinensis HOM05D005729 ORTHO05D007026 8.3e-52 207.6 190 71.6
Manes.04G092600 Manihot esculenta HOM05D005729 ORTHO05D007026 2.0e-50 203.0 191 60.2
Dinv33283 Davidia involucrata HOM05D005729 ORTHO05D007026 3.9e-49 198.7 203 61.1
Aqoxy5G03167 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 8.6e-49 197.6 193 68.4
Aqoxy5G03273 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 2.5e-48 196.1 194 63.9
CSS0020873 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 2.5e-48 196.1 195 63.1
ClCG01G007820 Citrullus lanatus HOM05D005729 ORTHO05D007026 2.5e-48 196.1 196 61.2
Prupe.2G125900 Prunus persica HOM05D005729 ORTHO05D007026 1.2e-47 193.7 196 63.8
SGA_v2.0_scaffold47G17637 Striga asiatica HOM05D005729 ORTHO05D007026 1.6e-47 193.4 196 68.4
PGR142G3540 Punica granatum HOM05D005729 ORTHO05D007026 2.8e-47 192.6 196 57.1
MELO3C005111.2 Cucumis melo HOM05D005729 ORTHO05D007026 3.6e-47 192.2 196 62.2
Oeu003419.1 Olea europaea HOM05D005729 ORTHO05D007026 4.7e-47 191.8 197 68.0
SalBow7G1413 Salvia bowleyana HOM05D005729 ORTHO05D007026 4.7e-47 191.8 194 62.9
CANSAT64G2014 Cannabis sativa HOM05D005729 ORTHO05D007026 6.2e-47 191.4 191 62.8
MD00G1041400 Malus domestica HOM05D005729 ORTHO05D007026 1.1e-46 190.7 193 63.2
MD05G1139400 Malus domestica HOM05D005729 ORTHO05D007026 1.1e-46 190.7 193 65.3
Phvul.001G085400 Phaseolus vulgaris HOM05D005729 ORTHO05D007026 1.1e-46 190.7 192 63.0
Sed0006238 Sechium edule HOM05D005729 ORTHO05D007026 1.1e-46 190.7 196 62.2
DCAR_014472 Daucus carota HOM05D005729 ORTHO05D007026 2.3e-46 189.5 195 66.2
Duzib187G1006 Durio zibethinus HOM05D005729 ORTHO05D007026 4.0e-46 188.7 192 61.5
Lalb_Chr22g0359961 Lupinus albus HOM05D005729 ORTHO05D007026 5.2e-46 188.3 196 62.2
unitig_92.g28207 Utricularia gibba HOM05D005729 ORTHO05D007026 5.2e-46 188.3 194 63.9
CsaV3_5G024890 Cucumis sativus L. HOM05D005729 ORTHO05D007026 1.2e-45 187.2 196 61.2
Lju41C60T1 Lonicera japonica HOM05D005729 ORTHO05D007026 1.2e-45 187.2 208 66.3
Thecc.04G047000 Theobroma cacao HOM05D005729 ORTHO05D007026 1.2e-45 187.2 192 63.0
Dinv25620 Davidia involucrata HOM05D000884 ORTHO05D002127 1.5e-45 186.8 187 70.1
THA.LOC104815860 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 2.0e-45 186.4 190 64.7
TPR.G10334 Trifolium pratense HOM05D005729 ORTHO05D007026 3.4e-45 185.7 190 64.2
CAN.G473.157 Capsicum annuum HOM05D005729 ORTHO05D007026 4.4e-45 185.3 182 69.2
Cpa.g.sc9.286 Carica papaya HOM05D005729 ORTHO05D007026 4.4e-45 185.3 195 60.0
EL10Ac6g13393 Beta vulgaris HOM05D005729 ORTHO05D007026 5.8e-45 184.9 193 68.4
Potri.014G145600 Populus trichocarpa HOM05D005729 ORTHO05D007026 5.8e-45 184.9 192 58.3
EL10As7g23751 Beta vulgaris HOM05D005729 ORTHO05D007026 7.5e-45 184.5 193 67.4
Peaxi162Scf00420g00083 Petunia axillaris HOM05D005729 ORTHO05D007026 9.8e-45 184.1 192 68.2
Potri.002G237000 Populus trichocarpa HOM05D005729 ORTHO05D007026 1.3e-44 183.7 186 67.2
Ah.02g128910 Amaranthus hybridus HOM05D005729 ORTHO05D007026 1.7e-44 183.3 193 66.8
Medtr7g083930 Medicago truncatula HOM05D005729 ORTHO05D007026 1.7e-44 183.3 195 63.1
MBI07_g07331_MAGBIO Magnolia biondii HOM05D005729 ORTHO05D007026 2.2e-44 183.0 188 68.6
Nn4g22156 Nelumbo nucifera HOM05D005729 ORTHO05D007026 2.2e-44 183.0 179 62.6
Lj1g0015500 Lotus japonicus HOM05D005729 ORTHO05D007026 3.7e-44 182.2 191 67.0
PGSC0003DMG400035897 Solanum tuberosum HOM05D005729 ORTHO05D007026 4.9e-44 181.8 187 69.0
FAN17G0918 Fragaria x ananassa HOM05D005729 ORTHO05D007026 6.4e-44 181.4 188 58.5
Solyc02g094490.4 Solanum lycopersicum HOM05D005729 ORTHO05D007026 6.4e-44 181.4 188 60.6
FAN22G1114 Fragaria x ananassa HOM05D005729 ORTHO05D007026 8.3e-44 181.0 188 58.5
Ciclev10016760m.g Citrus clementina HOM05D005729 ORTHO05D007026 1.1e-43 180.6 195 64.6
RcHm_v2.0_Chr5g0049531 Rosa chinensis HOM05D005729 ORTHO05D007026 1.1e-43 180.6 189 60.3
THA.LOC104826200 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 1.1e-43 180.6 190 66.8
FAN12G1178 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.4e-43 180.3 188 58.0
FAN21G1155 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.4e-43 180.3 188 61.2
Sopen02g039170 Solanum pennellii HOM05D005729 ORTHO05D007026 1.4e-43 180.3 187 67.9
TAR371G0439 Trochodendron aralioides HOM05D005729 ORTHO05D007026 1.4e-43 180.3 187 62.0
Eucgr.G01937 Eucalyptus grandis HOM05D005729 ORTHO05D007026 1.9e-43 179.9 194 58.8
Ca_08134_v3 Cicer arietinum L. HOM05D005729 ORTHO05D007026 2.4e-43 179.5 192 67.7
FvH4_4g34010 Fragaria vesca HOM05D005729 ORTHO05D007026 4.1e-43 178.7 188 58.0
Glyma.19G102200 Glycine max HOM05D005729 ORTHO05D007026 4.1e-43 178.7 191 59.7
Glyma.16G049200 Glycine max HOM05D005729 ORTHO05D007026 7.0e-43 177.9 193 61.1
Sed0018343 Sechium edule HOM05D005729 ORTHO05D007026 7.0e-43 177.9 195 59.5
TAR629G2671 Trochodendron aralioides HOM05D005729 ORTHO05D007026 1.6e-42 176.8 192 67.2
Gohir.D07G239700 Gossypium hirsutum HOM05D005729 ORTHO05D007026 2.7e-42 176.0 190 63.7
Aa31LG5G5560 Aethionema arabicum HOM05D005729 ORTHO05D007026 4.6e-42 175.3 189 66.7
QL11p027744 Quercus lobata HOM05D005729 ORTHO05D007026 4.6e-42 175.3 187 63.1
Gorai.001G275800 Gossypium raimondii HOM05D005729 ORTHO05D007026 7.8e-42 174.5 190 63.7
Thhalv10017252m.g Eutrema salsugineum HOM05D005729 ORTHO05D007026 2.3e-41 172.9 194 61.3
TWI34G0826 Tripterygium wilfordii HOM05D005729 ORTHO05D007026 2.3e-41 172.9 196 64.3
TAR628G1373 Trochodendron aralioides HOM05D005729 ORTHO05D007026 2.3e-41 172.9 192 66.7
Atru.chr6.2652 Acer truncatum HOM05D005729 ORTHO05D007026 5.0e-41 171.8 195 66.2
Sp4g13900 Schrenkiella parvula HOM05D005729 ORTHO05D007026 1.9e-40 169.9 194 64.4
FAN25G1272 Fragaria x ananassa HOM05D005729 ORTHO05D007026 3.3e-40 169.1 188 59.0
ATR0559G324 Amborella trichopoda HOM05D005729 ORTHO05D007026 5.6e-40 168.3 197 56.9
arahy.Tifrunner.gnm1.ann1.33W0XH Arachis hypogaea HOM05D005729 ORTHO05D007026 1.2e-39 167.2 200 54.0
Psat3g093680 Pisum sativum HOM05D005729 ORTHO05D007026 2.8e-39 166.0 195 59.5
Cfa007167 Carpinus fangiana HOM05D005729 ORTHO05D007026 3.6e-39 165.6 190 67.4
Migut.K01484 Erythranthe guttata HOM05D005729 ORTHO05D007026 4.7e-39 165.2 190 62.1
AL4G26660 Arabidopsis lyrata HOM05D005729 ORTHO05D007026 8.1e-39 164.5 194 63.4
AT2G31410 Arabidopsis thaliana HOM05D005729 ORTHO05D007026 1.4e-38 163.7 195 63.6
Sc07g0003710 Simmondsia chinensis HOM05D005729 ORTHO05D007026 1.4e-38 163.7 189 64.6
Nitab4.5_0002172g0090 Nicotiana tabacum HOM05D005729 ORTHO05D007026 1.8e-38 163.3 190 62.6
Gohir.A07G232500 Gossypium hirsutum HOM05D005729 ORTHO05D007026 2.3e-38 162.9 190 61.1
Cfa016824 Carpinus fangiana HOM05D005729 ORTHO05D007026 3.1e-38 162.5 190 67.4
BcaB01g04046 Brassica carinata HOM05D005729 ORTHO05D007026 1.5e-37 160.2 193 63.2
Carub.0004s1273 Capsella rubella HOM05D005729 ORTHO05D007026 2.6e-37 159.5 194 63.4
Haze_19869 Corylus avellana HOM05D005729 ORTHO05D007026 2.6e-37 159.5 185 68.1
BcaC02g07982 Brassica carinata HOM05D005729 ORTHO05D007026 3.4e-37 159.1 190 58.9
C04p61110 Brassica napus HOM05D005729 ORTHO05D007026 3.4e-37 159.1 190 58.9
BolC4t27596H Brassica oleracea HOM05D005729 ORTHO05D007026 3.4e-37 159.1 190 58.9
Duzib264G0852 Durio zibethinus HOM05D005729 ORTHO05D007026 7.5e-37 157.9 198 56.6
Haze_14943 Corylus avellana HOM05D005729 ORTHO05D007026 1.3e-36 157.1 190 65.8
A04p24280 Brassica napus HOM05D005729 ORTHO05D007026 4.9e-36 155.2 190 57.4
BraA04t17947Z Brassica rapa HOM05D005729 ORTHO05D007026 4.9e-36 155.2 190 57.4
HPP92_011631 Vanilla planifolia HOM05D005729 ORTHO05D007026 6.4e-36 154.8 189 63.5
A03p17590 Brassica napus HOM05D005729 ORTHO05D007026 1.1e-35 154.1 192 63.0
BraA03t11026Z Brassica rapa HOM05D005729 ORTHO05D007026 1.1e-35 154.1 193 62.2
CARHR125040 Cardamine hirsuta HOM05D005729 ORTHO05D007026 1.4e-35 153.7 194 54.1
C03p20700 Brassica napus HOM05D005729 ORTHO05D007026 3.2e-35 152.5 190 63.2
BolC3t14453H Brassica oleracea HOM05D005729 ORTHO05D007026 3.2e-35 152.5 190 63.2
AUR62036639 Chenopodium quinoa HOM05D005729 ORTHO05D007026 3.2e-35 152.5 186 61.8
CSS0008758 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 1.3e-33 147.1 135 67.4
Zm00001eb183750 Zea mays HOM05D005729 ORTHO05D007026 1.1e-32 144.1 187 46.0
PSO017G0758 Papaver somniferum HOM05D005729 ORTHO05D007026 4.3e-32 142.1 187 59.4
RcHm_v2.0_Chr6g0252241 Rosa chinensis HOM05D005729 ORTHO05D007026 5.6e-32 141.7 165 52.1
CSS0019060 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 7.3e-32 141.4 135 65.9
PSO478G2072 Papaver somniferum HOM05D005729 ORTHO05D007026 1.2e-31 140.6 187 47.1
Pp3c11_25830 Physcomitrium patens HOM05D005729 ORTHO05D007026 1.8e-30 136.7 186 45.7
Rhsim08G0039300 Rhododendron simsii HOM05D005729 ORTHO05D007026 5.2e-30 135.2 146 59.6
Nitab4.5_0000519g0260 Nicotiana tabacum HOM05D005729 ORTHO05D007026 8.9e-30 134.4 138 71.0
RcHm_v2.0_Chr2g0115461 Rosa chinensis HOM05D005729 ORTHO05D007026 1.3e-28 130.6 165 49.1
RcHm_v2.0_Chr7g0240621 Rosa chinensis HOM05D005729 ORTHO05D007026 2.9e-28 129.4 165 49.7
Zm00001eb246070 Zea mays HOM05D005729 ORTHO05D007026 6.4e-28 128.3 183 43.2
Os02g0595400 Oryza sativa ssp. japonica HOM05D005729 ORTHO05D007026 8.4e-28 127.9 186 49.5
AUR62034632 Chenopodium quinoa HOM05D000604 ORTHO05D004512 2.4e-27 126.3 122 56.6
CDE06G2057 Ceratophyllum demersum HOM05D005729 ORTHO05D007026 5.4e-27 125.2 121 58.7
Cc07_g01230 Coffea canephora HOM05D005729 ORTHO05D007026 9.2e-27 124.4 204 55.4
Sabra02G0180500 Salix brachista HOM05D005729 ORTHO05D007026 1.0e-25 120.9 185 44.9
RcHm_v2.0_Chr2g0117931 Rosa chinensis HOM05D005729 ORTHO05D007026 3.0e-25 119.4 125 56.8
RcHm_v2.0_Chr5g0057561 Rosa chinensis HOM05D005729 ORTHO05D007026 3.0e-25 119.4 156 56.4
RcHm_v2.0_Chr6g0272931 Rosa chinensis HOM05D005729 ORTHO05D007026 2.5e-24 116.3 126 57.9
COL.COLO4_13365 Corchorus olitorius HOM05D005729 ORTHO05D007026 7.3e-24 114.8 114 54.4
RcHm_v2.0_Chr5g0026441 Rosa chinensis HOM05D005729 ORTHO05D007026 1.2e-23 114.0 125 55.2
RcHm_v2.0_Chr1g0315821 Rosa chinensis HOM05D005729 ORTHO05D007026 3.6e-23 112.5 125 56.0
Mapoly0127s0012 Marchantia polymorpha HOM05D005729 ORTHO05D007026 4.0e-22 109.0 182 52.7
Haze_19868 Corylus avellana HOM05D005729 ORTHO05D007026 7.1e-19 98.2 99 57.6
RcHm_v2.0_Chr6g0295141 Rosa chinensis HOM05D005729 ORTHO05D007026 2.1e-18 96.7 108 62.0
Hma1.2p1_0033F.1_g021130 Hydrangea macrophylla HOM05D005729 ORTHO05D007026 2.7e-18 96.3 104 75.0
Sc14g0008230 Simmondsia chinensis HOM05D005729 ORTHO05D007026 2.8e-15 86.3 111 48.6
Solyc03g083260.1 Solanum lycopersicum HOM05D005729 ORTHO05D007026 4.0e-14 82.4 84 53.6
Atru.chr5.655 Acer truncatum HOM05D000598 ORTHO05D000480 4.9e-12 75.5 153 51.6
Psat4g074560 Pisum sativum HOM05D005729 ORTHO05D007026 8.4e-12 74.7 126 40.5
CBR_g4589 Chara braunii HOM05D005729 ORTHO05D007026 3.0e-09 66.2 175 42.3
EL10Ac1g01380 Beta vulgaris HOM05D005729 ORTHO05D007026 1.1e-08 64.3 69 55.1
Psat4g074600 Pisum sativum HOM05D005729 ORTHO05D007026 1.6e-07 60.5 81 49.4
Atru.chr6.2684 Acer truncatum HOM05D005729 ORTHO05D007026 3.7e-07 59.3 48 66.7


User provided reference genes

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