Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0451381 Helianthus annuus HOM05D005312 ORTHO05D006459 5.8e-209 730.7 388 100.0
Lsat_1_v5_gn_2_94460 Lactuca sativa HOM05D005312 ORTHO05D006459 9.7e-156 553.9 355 78.0
Ciclev10015374m.g Citrus clementina HOM05D005312 ORTHO05D006459 4.7e-134 481.9 420 63.1
Hma1.2p1_0868F.1_g230570 Hydrangea macrophylla HOM05D005312 ORTHO05D006459 4.7e-134 481.9 373 65.4
Dinv33289 Davidia involucrata HOM05D005312 ORTHO05D006459 6.1e-134 481.5 381 65.9
Migut.F00017 Erythranthe guttata HOM05D005312 ORTHO05D006459 4.0e-133 478.8 382 65.2
Sopen02g039150 Solanum pennellii HOM05D005312 ORTHO05D006459 8.9e-133 477.6 374 64.7
Solyc02g094480.4 Solanum lycopersicum HOM05D000001 ORTHO05D000003 1.2e-132 477.2 373 64.6
PGSC0003DMG400020194 Solanum tuberosum HOM05D005312 ORTHO05D006459 5.8e-132 474.9 378 64.0
ECA238G3491 Erigeron canadensis HOM05D000001 ORTHO05D000003 9.8e-132 474.2 291 82.5
Peaxi162Scf00420g00087 Petunia axillaris HOM05D005312 ORTHO05D006459 1.7e-131 473.4 380 62.9
Lj7A616T62 Lonicera japonica HOM05D005312 ORTHO05D006459 3.7e-131 472.2 377 65.0
Oeu039797.1 Olea europaea HOM05D005312 ORTHO05D006459 3.7e-131 472.2 429 61.3
SGA_v2.0_scaffold44G16946 Striga asiatica HOM05D005312 ORTHO05D006459 4.9e-131 471.9 368 65.2
CAN.G473.156 Capsicum annuum HOM05D005312 ORTHO05D006459 6.4e-131 471.5 378 63.5
Actinidia37728 Actinidia chinensis HOM05D005312 ORTHO05D006459 1.4e-130 470.3 377 64.7
CSS0036880 Camellia sinensis var. sinensis HOM05D005312 ORTHO05D006459 1.4e-130 470.3 383 64.2
CANSAT64G1152 Cannabis sativa HOM05D005312 ORTHO05D006459 4.1e-130 468.8 387 62.8
DCAR_002973 Daucus carota HOM05D005312 ORTHO05D006459 5.4e-130 468.4 399 61.9
Cc07_g01210 Coffea canephora HOM05D005312 ORTHO05D006459 9.2e-130 467.6 385 64.2
Rhsim10G0001700 Rhododendron simsii HOM05D005312 ORTHO05D006459 1.2e-129 467.2 423 62.6
SalBow4G2016 Salvia bowleyana HOM05D005312 ORTHO05D006459 2.0e-129 466.5 387 64.3
Aa31LG2G5770 Aethionema arabicum HOM05D005312 ORTHO05D006459 8.6e-128 461.1 374 64.2
vmacro22240 Vaccinium macrocarpon HOM05D005312 ORTHO05D006459 4.3e-127 458.8 384 63.3
MSTRG.3045 Avicennia marina HOM05D005312 ORTHO05D006459 9.5e-127 457.6 384 62.2
Thecc.04G046000 Theobroma cacao HOM05D005312 ORTHO05D006459 2.1e-126 456.4 384 61.2
Atru.chr6.2642 Acer truncatum HOM05D005312 ORTHO05D006459 3.6e-126 455.7 377 63.1
Manes.04G092300 Manihot esculenta HOM05D005312 ORTHO05D006459 1.4e-125 453.8 378 62.2
Prupe.3G312600 Prunus persica HOM05D005312 ORTHO05D006459 1.8e-125 453.4 389 60.9
TAR371G0255 Trochodendron aralioides HOM05D005312 ORTHO05D006459 1.8e-125 453.4 384 63.0
THA.LOC104805304 Tarenaya hassleriana HOM05D005312 ORTHO05D006459 2.3e-125 453.0 366 63.9
A02p34780 Brassica napus HOM05D005312 ORTHO05D006459 4.0e-125 452.2 352 64.8
COL.COLO4_13349 Corchorus olitorius HOM05D005312 ORTHO05D006459 4.0e-125 452.2 384 61.2
BraA02t08484Z Brassica rapa HOM05D005312 ORTHO05D006459 5.2e-125 451.8 350 64.3
FvH4_6g54210 Fragaria vesca HOM05D005312 ORTHO05D006459 8.9e-125 451.1 383 61.1
FAN09G1737 Fragaria x ananassa HOM05D005312 ORTHO05D006459 8.9e-125 451.1 383 61.1
FAN14G0182 Fragaria x ananassa HOM05D005312 ORTHO05D006459 8.9e-125 451.1 383 61.1
Cpa.g.sc70.78 Carica papaya HOM05D005312 ORTHO05D006459 1.5e-124 450.3 388 61.6
ClCG05G012720 Citrullus lanatus HOM05D005312 ORTHO05D006459 1.5e-124 450.3 376 61.2
RcHm_v2.0_Chr2g0176401 Rosa chinensis HOM05D005312 ORTHO05D006459 2.0e-124 449.9 385 61.8
Sed0007531 Sechium edule HOM05D005312 ORTHO05D006459 2.0e-124 449.9 375 60.8
FAN05G1132 Fragaria x ananassa HOM05D005312 ORTHO05D006459 4.4e-124 448.7 383 61.1
QL02p069878 Quercus lobata HOM05D005312 ORTHO05D006459 5.8e-124 448.4 386 60.9
THA.LOC104823996 Tarenaya hassleriana HOM05D005312 ORTHO05D006459 5.8e-124 448.4 384 61.2
AT3G26780 Arabidopsis thaliana HOM05D005312 ORTHO05D006459 7.5e-124 448.0 362 62.7
Manes.11G077500 Manihot esculenta HOM05D005312 ORTHO05D006459 7.5e-124 448.0 374 61.2
Oeu003422.1 Olea europaea HOM05D005312 ORTHO05D006459 7.5e-124 448.0 413 59.8
FAN02G3987 Fragaria x ananassa HOM05D005312 ORTHO05D006459 9.8e-124 447.6 383 60.6
MD17G1007700 Malus domestica HOM05D005312 ORTHO05D006459 9.8e-124 447.6 387 60.5
Nn4g22171 Nelumbo nucifera HOM05D005312 ORTHO05D006459 1.3e-123 447.2 384 59.4
Carub.0005s0483 Capsella rubella HOM05D005312 ORTHO05D006459 1.7e-123 446.8 364 63.2
TWI32G0425 Tripterygium wilfordii HOM05D005312 ORTHO05D006459 1.7e-123 446.8 382 61.3
C02p53340 Brassica napus HOM05D005312 ORTHO05D006459 2.9e-123 446.0 350 64.3
Sp2g15910 Schrenkiella parvula HOM05D005312 ORTHO05D006459 2.9e-123 446.0 367 62.4
BcaC03g17388 Brassica carinata HOM05D005312 ORTHO05D006459 3.7e-123 445.7 350 64.3
BolC2t11405H Brassica oleracea HOM05D005312 ORTHO05D006459 3.7e-123 445.7 350 64.3
TAR629G1483 Trochodendron aralioides HOM05D005312 ORTHO05D006459 8.3e-123 444.5 380 62.6
Glyma.02G066000 Glycine max HOM05D005312 ORTHO05D006459 1.1e-122 444.1 380 61.6
Duzib264G0870 Durio zibethinus HOM05D005312 ORTHO05D006459 2.4e-122 443.0 384 60.2
MD09G1004000 Malus domestica HOM05D005312 ORTHO05D006459 2.4e-122 443.0 387 60.2
MELO3C014806.2 Cucumis melo HOM05D005312 ORTHO05D006459 7.0e-122 441.4 379 59.9
Thhalv10004350m.g Eutrema salsugineum HOM05D005312 ORTHO05D006459 9.2e-122 441.0 363 61.7
AL5G15650 Arabidopsis lyrata HOM05D005312 ORTHO05D006459 1.2e-121 440.7 361 62.3
Glyma.16G146900 Glycine max HOM05D005312 ORTHO05D006459 1.2e-121 440.7 427 56.7
Ah.02g128920 Amaranthus hybridus HOM05D005312 ORTHO05D006459 1.6e-121 440.3 388 59.8
Sc03g0004830 Simmondsia chinensis HOM05D005312 ORTHO05D006459 2.1e-121 439.9 366 62.0
BcaB07g30210 Brassica carinata HOM05D005312 ORTHO05D006459 2.7e-121 439.5 360 61.9
EL10As7g23753 Beta vulgaris HOM05D005312 ORTHO05D006459 3.5e-121 439.1 392 60.5
Cfa007172 Carpinus fangiana HOM05D005312 ORTHO05D006459 4.6e-121 438.7 381 60.6
Duzib187G0698 Durio zibethinus HOM05D005312 ORTHO05D006459 4.6e-121 438.7 382 59.9
Potri.002G236600 Populus trichocarpa HOM05D005312 ORTHO05D006459 8.6e-120 434.5 365 61.4
Potri.014G145900 Populus trichocarpa HOM05D005312 ORTHO05D006459 1.1e-119 434.1 377 60.5
Sabra14G0109800 Salix brachista HOM05D005312 ORTHO05D006459 1.9e-119 433.3 372 60.2
Duzib147G0684 Durio zibethinus HOM05D005312 ORTHO05D006459 3.3e-119 432.6 383 59.8
Psat1g097480 Pisum sativum HOM05D005312 ORTHO05D006459 3.3e-119 432.6 381 60.6
CiPaw.03G003000 Carya illinoinensis HOM05D005312 ORTHO05D006459 7.3e-119 431.4 382 59.9
Phvul.004G070300 Phaseolus vulgaris HOM05D005312 ORTHO05D006459 1.2e-118 430.6 383 59.3
TPR.G36663 Trifolium pratense HOM05D005312 ORTHO05D006459 1.2e-118 430.6 390 59.2
Gohir.A07G232100 Gossypium hirsutum HOM05D005312 ORTHO05D006459 1.6e-118 430.3 383 59.8
Sabra02G0180200 Salix brachista HOM05D005312 ORTHO05D006459 1.6e-118 430.3 364 59.9
Gohir.D07G239300 Gossypium hirsutum HOM05D005312 ORTHO05D006459 4.7e-118 428.7 383 59.3
Gorai.001G275400 Gossypium raimondii HOM05D005312 ORTHO05D006459 4.7e-118 428.7 383 59.3
CARHR013180 Cardamine hirsuta HOM05D005312 ORTHO05D006459 6.2e-118 428.3 360 61.7
Eucgr.G01940 Eucalyptus grandis HOM05D005312 ORTHO05D006459 6.2e-118 428.3 388 59.0
Lj2g0017210 Lotus japonicus HOM05D005312 ORTHO05D006459 8.1e-118 427.9 379 60.4
Sp1g11430 Schrenkiella parvula HOM05D005312 ORTHO05D006459 8.1e-118 427.9 364 61.0
Aa31LG1G1910 Aethionema arabicum HOM05D005312 ORTHO05D006459 1.1e-117 427.6 372 59.1
Nitab4.5_0025697g0010 Nicotiana tabacum HOM05D005312 ORTHO05D006459 1.4e-117 427.2 356 62.1
AT1G12850 Arabidopsis thaliana HOM05D005312 ORTHO05D006459 1.8e-117 426.8 361 62.0
AL1G24500 Arabidopsis lyrata HOM05D005312 ORTHO05D006459 5.8e-116 421.8 359 61.3
C08p15720 Brassica napus HOM05D005312 ORTHO05D006459 7.5e-116 421.4 355 61.4
CARHR147850 Cardamine hirsuta HOM05D005312 ORTHO05D006459 7.5e-116 421.4 354 62.7
BolC8t49199H Brassica oleracea HOM05D005312 ORTHO05D006459 9.9e-116 421.0 355 61.4
Medtr6g033275 Medicago truncatula HOM05D005312 ORTHO05D006459 9.9e-116 421.0 386 58.5
Lalb_Chr02g0156821 Lupinus albus HOM05D005312 ORTHO05D006459 1.7e-115 420.2 382 60.5
CSS0020784 Camellia sinensis var. sinensis HOM05D005312 ORTHO05D006459 3.7e-115 419.1 362 61.3
Aqoxy5G03173 Aquilegia oxysepala HOM05D005312 ORTHO05D006459 4.9e-115 418.7 385 57.4
MBI07_g40342_MAGBIO Magnolia biondii HOM05D005312 ORTHO05D006459 3.2e-114 416.0 367 59.4
Carub.0001s1260 Capsella rubella HOM05D005312 ORTHO05D006459 5.4e-114 415.2 357 61.1
BcaB03g13161 Brassica carinata HOM05D005312 ORTHO05D006459 7.1e-114 414.8 359 60.4
PGR083G1093 Punica granatum HOM05D005312 ORTHO05D006459 2.1e-113 413.3 378 57.4
Lalb_Chr06g0173771 Lupinus albus HOM05D005312 ORTHO05D006459 2.7e-113 412.9 383 58.0
CDE02G3855 Ceratophyllum demersum HOM05D005312 ORTHO05D006459 6.0e-113 411.8 362 60.5
A08p32570 Brassica napus HOM05D005312 ORTHO05D006459 1.7e-112 410.2 354 60.2
AUR62041074 Chenopodium quinoa HOM05D005312 ORTHO05D006459 3.0e-112 409.5 378 57.4
PSO478G3188 Papaver somniferum HOM05D005312 ORTHO05D006459 3.0e-112 409.5 387 56.3
CDE06G1073 Ceratophyllum demersum HOM05D005312 ORTHO05D006459 3.9e-112 409.1 363 59.5
Thhalv10007881m.g Eutrema salsugineum HOM05D005312 ORTHO05D006459 1.9e-111 406.8 361 58.7
PSO017G1316 Papaver somniferum HOM05D005312 ORTHO05D006459 2.5e-111 406.4 388 56.4
BraA08t35181Z Brassica rapa HOM05D005312 ORTHO05D006459 2.8e-110 402.9 354 59.3
arahy.Tifrunner.gnm1.ann1.ZY683S Arachis hypogaea HOM05D005312 ORTHO05D006459 4.7e-110 402.1 403 54.6
arahy.Tifrunner.gnm1.ann1.JN3C7K Arachis hypogaea HOM05D005312 ORTHO05D006459 1.3e-107 394.0 407 53.6
Gohir.D10G081000 Gossypium hirsutum HOM05D005312 ORTHO05D006459 1.3e-107 394.0 359 56.8
Gorai.011G088100 Gossypium raimondii HOM05D005312 ORTHO05D006459 2.9e-107 392.9 358 55.9
Nitab4.5_0002172g0150 Nicotiana tabacum HOM05D005312 ORTHO05D006459 1.9e-106 390.2 396 54.3
Gohir.A10G070100 Gossypium hirsutum HOM05D005312 ORTHO05D006459 2.7e-105 386.3 359 56.5
ATR0582G189 Amborella trichopoda HOM05D005312 ORTHO05D006459 1.3e-102 377.5 410 52.4
Zm00001eb170350 Zea mays HOM05D005312 ORTHO05D006459 2.6e-100 369.8 368 53.3
AUR62037835 Chenopodium quinoa HOM05D005312 ORTHO05D006459 9.3e-98 361.3 322 58.1
Os11g0522000 Oryza sativa ssp. japonica HOM05D005312 ORTHO05D006459 1.2e-97 360.9 372 51.6
SEGI_01379 Sequoiadendron giganteum HOM05D005312 ORTHO05D006459 7.8e-97 358.2 390 51.3
GSVIVG01033003001 Vitis vinifera HOM05D005312 ORTHO05D006459 5.6e-95 352.1 284 65.1
ECA246G2144 Erigeron canadensis HOM05D005312 ORTHO05D006459 6.5e-75 285.4 216 63.9
Ca_26608_v3 Cicer arietinum L. HOM05D005312 ORTHO05D006459 1.2e-68 264.6 417 40.8
unitig_37.g12041 Utricularia gibba HOM05D005312 ORTHO05D006459 2.9e-67 260.0 207 62.8
SEGI_20575 Sequoiadendron giganteum HOM05D005312 ORTHO05D006459 5.1e-64 249.2 293 47.4
Pp3c21_20660 Physcomitrium patens HOM05D005312 ORTHO05D006459 5.7e-63 245.7 375 38.7
VMungo0464G0174 Vigna mungo HOM05D005312 ORTHO05D006459 5.3e-61 239.2 241 53.5
HPP92_008243 Vanilla planifolia HOM05D005312 ORTHO05D006459 1.0e-56 224.9 216 56.0
Actinidia19557 Actinidia chinensis HOM05D005312 ORTHO05D006459 1.1e-55 221.5 160 69.4
CSS0007293 Camellia sinensis var. sinensis HOM05D005312 ORTHO05D006459 1.0e-48 198.4 142 71.1
VMungo0464G1790 Vigna mungo HOM05D005312 ORTHO05D006459 8.8e-48 195.3 141 70.2
unitig_37.g12040 Utricularia gibba HOM05D005312 ORTHO05D006459 3.7e-46 189.9 142 65.5
Haze_14938 Corylus avellana HOM05D005312 ORTHO05D006459 2.9e-43 180.3 144 64.6
Nn3g16305 Nelumbo nucifera HOM05D005312 ORTHO05D006459 9.4e-42 175.3 207 48.8
AagrBONN_evm.TU.Sc2ySwM_344.1953 Anthoceros agrestis HOM05D005312 ORTHO05D006459 1.0e-40 171.8 290 34.8
CBR_g2835 Chara braunii HOM05D005312 ORTHO05D006459 4.8e-38 162.9 360 31.1
SGA_v2.0_scaffold173G39196 Striga asiatica HOM05D005312 ORTHO05D006459 8.6e-19 99.0 114 50.9
SEGI_29311 Sequoiadendron giganteum HOM05D005312 ORTHO05D006459 4.4e-15 86.7 75 56.0
CARHR120940 Cardamine hirsuta HOM05D005312 ORTHO05D006459 1.9e-10 71.2 78 52.6
PRCOL_00002808 Prasinoderma coloniale HOM05D005312 ORTHO05D006459 6.2e-09 66.2 307 24.4
Actinidia19558 Actinidia chinensis HOM05D005312 ORTHO05D006459 3.1e-08 63.9 127 37.8
Pp3c8_13210 Physcomitrium patens HOM05D003180 ORTHO05D003664 4.4e-07 60.1 132 35.6
C05p10420 Brassica napus HOM05D005312 ORTHO05D006459 1.7e-06 58.2 36 61.1
Pp3c24_9340 Physcomitrium patens HOM05D003180 ORTHO05D003664 3.7e-06 57.0 112 39.3


User provided reference genes

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