Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0450971 Helianthus annuus HOM05D014416 ORTHO05D011458 0.0e+00 1468.4 752 100.0
HanXRQChr12g0359091 Helianthus annuus HOM05D014416 ORTHO05D011458 3.4e-112 410.2 779 36.7
HanXRQChr01g0028051 Helianthus annuus HOM05D014416 ORTHO05D011458 4.4e-112 409.8 790 38.2
HanXRQChr14g0445841 Helianthus annuus HOM05D014416 ORTHO05D011458 1.5e-107 394.8 810 37.2
HanXRQChr10g0294121 Helianthus annuus HOM05D014416 ORTHO05D011458 4.5e-72 276.9 227 65.6
HanXRQChr10g0308551 Helianthus annuus HOM05D014416 ORTHO05D011458 1.3e-71 275.4 149 92.6
HanXRQChr16g0531191 Helianthus annuus HOM05D009775 ORTHO05D011458 6.7e-60 236.5 683 28.1
HanXRQChr14g0433191 Helianthus annuus HOM05D011335 ORTHO05D013889 1.0e-44 186.0 701 27.5
HanXRQChr11g0340571 Helianthus annuus HOM05D009775 ORTHO05D011458 4.4e-35 154.1 439 27.1
HanXRQChr02g0055151 Helianthus annuus HOM05D011335 ORTHO05D013889 1.5e-32 145.6 402 27.6
HanXRQChr02g0042221 Helianthus annuus HOM05D009775 ORTHO05D011458 7.7e-32 143.3 260 32.3
HanXRQChr15g0468421 Helianthus annuus HOM05D009775 ORTHO05D011458 1.0e-31 142.9 260 32.3
ECA236G2459 Erigeron canadensis HOM05D009001 ORTHO05D011396 2.3e-28 131.7 727 23.0
HanXRQChr02g0055161 Helianthus annuus HOM05D009775 ORTHO05D011458 3.9e-28 131.0 214 33.2
Lsat_1_v5_gn_0_40461 Lactuca sativa HOM05D009001 ORTHO05D011396 7.4e-27 126.7 755 20.8
HanXRQChr01g0030191 Helianthus annuus HOM05D009775 ORTHO05D011458 5.3e-25 120.6 232 30.6
HanXRQChr11g0340581 Helianthus annuus HOM05D009775 ORTHO05D011458 5.3e-25 120.6 196 35.7
HanXRQChr09g0271321 Helianthus annuus HOM05D014416 ORTHO05D011458 1.0e-23 116.3 56 89.3
HanXRQChr12g0359081 Helianthus annuus HOM05D014416 ORTHO05D011458 1.0e-23 116.3 118 44.1
HanXRQChr16g0527631 Helianthus annuus HOM05D009775 ORTHO05D011458 1.1e-22 112.8 410 24.6
Lsat_1_v5_gn_1_90641 Lactuca sativa HOM05D009001 ORTHO05D011396 4.2e-22 110.9 189 30.2
Lsat_1_v5_gn_5_147040 Lactuca sativa HOM05D011335 ORTHO05D013889 5.5e-22 110.5 400 26.0
Lsat_1_v5_gn_8_4920 Lactuca sativa HOM05D011335 ORTHO05D013889 5.5e-22 110.5 400 26.0
Lsat_1_v5_gn_5_65960 Lactuca sativa HOM05D011335 ORTHO05D013889 1.8e-20 105.5 378 25.7
HanXRQChr09g0239111 Helianthus annuus HOM05D009775 ORTHO05D011458 1.5e-19 102.4 189 30.7
Lsat_1_v5_gn_1_101500 Lactuca sativa HOM05D009001 ORTHO05D011396 2.9e-15 88.2 146 30.8
ECA236G1401 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.5e-15 87.0 443 24.6
ECA236G2250 Erigeron canadensis HOM05D000006 ORTHO05D000062 6.1e-13 80.5 282 27.0
ECA248G3750 Erigeron canadensis HOM05D009001 ORTHO05D011396 7.5e-11 73.6 384 24.0
Lsat_1_v5_gn_6_41521 Lactuca sativa HOM05D000056 ORTHO05D000019 3.7e-10 71.2 307 34.9
AUR62026574 Chenopodium quinoa HOM05D002644 ORTHO05D000233 4.9e-10 70.9 732 19.5
Lsat_1_v5_gn_8_10480 Lactuca sativa HOM05D008452 ORTHO05D010294 8.3e-10 70.1 427 22.7
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-09 69.7 429 22.8
HanXRQChr10g0311331 Helianthus annuus HOM05D014416 ORTHO05D011458 1.4e-09 69.3 51 66.7
ECA248G3320 Erigeron canadensis HOM05D035679 ORTHO05D011396 2.4e-09 68.6 358 22.3
HanXRQChr12g0375161 Helianthus annuus HOM05D011335 ORTHO05D013889 3.1e-09 68.2 110 36.4
Ah.13g065690 Amaranthus hybridus HOM05D009341 ORTHO05D011542 2.7e-08 65.1 124 37.1
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 7.7e-08 63.5 162 27.2
ECA234G3421 Erigeron canadensis HOM05D009775 ORTHO05D011458 1.0e-07 63.2 106 32.1
ECA247G4030 Erigeron canadensis HOM05D009001 ORTHO05D011396 1.0e-07 63.2 218 25.7
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 1.3e-07 62.8 158 29.7
Lsat_1_v5_gn_1_123440 Lactuca sativa HOM05D009001 ORTHO05D011396 1.3e-07 62.8 377 22.3
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 1.3e-07 62.8 169 32.5
SGA_v2.0_scaffold61G21245 Striga asiatica HOM05D000036 ORTHO05D010104 1.3e-07 62.8 438 23.1
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 1.7e-07 62.4 401 23.2
Lsat_1_v5_gn_6_98241 Lactuca sativa HOM05D009001 ORTHO05D011396 1.7e-07 62.4 162 29.6
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.3e-07 62.0 162 27.2
ECA246G4631 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.3e-07 62.0 148 35.1
ECA247G0191 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.3e-07 62.0 190 24.7
FvH4_1g20121 Fragaria vesca HOM05D000539 ORTHO05D000233 2.3e-07 62.0 152 28.3
FvH4_1g20221 Fragaria vesca HOM05D000539 ORTHO05D000233 2.9e-07 61.6 164 28.0
Ah.14g080050 Amaranthus hybridus HOM05D009341 ORTHO05D011542 3.8e-07 61.2 126 38.1
FvH4_6g12902 Fragaria vesca HOM05D000539 ORTHO05D000233 3.8e-07 61.2 120 34.2
FAN23G1195 Fragaria x ananassa HOM05D000723 ORTHO05D001760 6.6e-07 60.5 164 28.7
Sed0022033 Sechium edule HOM05D000539 ORTHO05D000233 6.6e-07 60.5 173 27.2
Ca_04436_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 8.6e-07 60.1 422 21.6
FvH4_2g21272 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-06 59.7 120 32.5
ECA246G0066 Erigeron canadensis HOM05D009775 ORTHO05D011458 1.5e-06 59.3 126 30.2
FvH4_3g14251 Fragaria vesca HOM05D000539 ORTHO05D000233 1.5e-06 59.3 120 33.3
Medtr2g092960 Medicago truncatula HOM05D007793 ORTHO05D010104 1.5e-06 59.3 161 29.8
RcHm_v2.0_Chr2g0145261 Rosa chinensis HOM05D000539 ORTHO05D000233 1.9e-06 58.9 400 22.8
MELO3C027653.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.5e-06 58.5 234 23.9
HanXRQChr10g0317561 Helianthus annuus HOM05D000539 ORTHO05D000592 2.5e-06 58.5 134 31.3
VMungo0251G2025 Vigna mungo HOM05D007793 ORTHO05D010104 2.5e-06 58.5 150 22.7
FvH4_1g28483 Fragaria vesca HOM05D000539 ORTHO05D000233 3.3e-06 58.2 119 31.9
Lsat_1_v5_gn_5_56341 Lactuca sativa HOM05D011335 ORTHO05D013889 4.2e-06 57.8 131 29.8
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 4.2e-06 57.8 170 28.8
RcHm_v2.0_Chr6g0271081 Rosa chinensis HOM05D000539 ORTHO05D000233 4.2e-06 57.8 161 27.3
CANSAT54G0141 Cannabis sativa HOM05D009806 ORTHO05D000233 5.5e-06 57.4 163 29.4
HanXRQChr11g0345391 Helianthus annuus HOM05D009775 ORTHO05D013889 5.5e-06 57.4 265 21.9
Lsat_1_v5_gn_3_125401 Lactuca sativa HOM05D009001 ORTHO05D011396 5.5e-06 57.4 202 24.3
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 5.5e-06 57.4 156 28.8
HanXRQChr14g0441961 Helianthus annuus HOM05D000539 ORTHO05D000592 7.2e-06 57.0 105 32.4
Lsat_1_v5_gn_3_26920 Lactuca sativa HOM05D009001 ORTHO05D013330 7.2e-06 57.0 137 27.0
Lsat_1_v5_gn_5_59900 Lactuca sativa HOM05D009001 ORTHO05D011396 7.2e-06 57.0 343 23.6
Prupe.3G107500 Prunus persica HOM05D000539 ORTHO05D000233 7.2e-06 57.0 157 27.4
RcHm_v2.0_Chr1g0342101 Rosa chinensis HOM05D000539 ORTHO05D000233 7.2e-06 57.0 183 27.3
RcHm_v2.0_Chr4g0391901 Rosa chinensis HOM05D000539 ORTHO05D000233 9.5e-06 56.6 183 27.3


User provided reference genes

Program Settings