Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0449221 Helianthus annuus HOM05D005283 ORTHO05D006769 4.6e-38 160.6 75 100.0
HanXRQChr12g0372601 Helianthus annuus HOM05D005283 ORTHO05D006769 2.3e-29 131.7 66 93.9
HanXRQChr13g0411191 Helianthus annuus HOM05D005283 ORTHO05D006769 3.6e-22 107.8 69 75.4
Lsat_1_v5_gn_5_54040 Lactuca sativa HOM05D005283 ORTHO05D006769 1.1e-18 96.3 69 68.1
Dinv29746 Davidia involucrata HOM05D005283 ORTHO05D006769 4.5e-17 90.9 69 66.7
Lj6C677T9 Lonicera japonica HOM05D005283 ORTHO05D006769 1.3e-16 89.4 69 63.8
Solyc01g080620.3 Solanum lycopersicum HOM05D005283 ORTHO05D006769 6.5e-16 87.0 73 63.0
Sopen01g032430 Solanum pennellii HOM05D005283 ORTHO05D006769 6.5e-16 87.0 73 63.0
Dinv44377 Davidia involucrata HOM05D005283 ORTHO05D006769 8.5e-16 86.7 69 63.8
Nitab4.5_0000059g0420 Nicotiana tabacum HOM05D005283 ORTHO05D006769 1.1e-15 86.3 60 70.0
FAN12G0573 Fragaria x ananassa HOM05D005283 ORTHO05D006769 2.5e-15 85.1 69 60.9
CANSAT78G0446 Cannabis sativa HOM05D005283 ORTHO05D006769 3.2e-15 84.7 64 67.2
FvH4_4g18240 Fragaria vesca HOM05D005283 ORTHO05D006769 3.2e-15 84.7 69 60.9
FAN12G1245 Fragaria x ananassa HOM05D005283 ORTHO05D006769 3.2e-15 84.7 69 60.9
Nitab4.5_0001120g0020 Nicotiana tabacum HOM05D005283 ORTHO05D006769 5.5e-15 84.0 60 68.3
vmacro08159 Vaccinium macrocarpon HOM05D005283 ORTHO05D006769 5.5e-15 84.0 71 62.0
Actinidia40274 Actinidia chinensis HOM05D005283 ORTHO05D006769 7.2e-15 83.6 69 63.8
CAN.G185.38 Capsicum annuum HOM05D005283 ORTHO05D006769 7.2e-15 83.6 60 68.3
HanXRQChr09g0244011 Helianthus annuus HOM05D005283 ORTHO05D006769 7.2e-15 83.6 55 70.9
Cpa.g.sc66.37 Carica papaya HOM05D005283 ORTHO05D006769 9.4e-15 83.2 60 66.7
TWI09G0775 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 9.4e-15 83.2 61 65.6
Rhsim04G0223000 Rhododendron simsii HOM05D005283 ORTHO05D006769 1.2e-14 82.8 62 64.5
Ciclev10004285m.g Citrus clementina HOM05D005283 ORTHO05D006769 1.6e-14 82.4 64 62.5
Hma1.2p1_1185F.1_g265090 Hydrangea macrophylla HOM05D005283 ORTHO05D006769 1.6e-14 82.4 69 60.9
TWI53G1858 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 1.6e-14 82.4 64 60.9
Thhalv10024402m.g Eutrema salsugineum HOM05D005283 ORTHO05D006769 2.1e-14 82.0 63 63.5
RcHm_v2.0_Chr4g0422381 Rosa chinensis HOM05D005283 ORTHO05D006769 2.1e-14 82.0 60 66.7
Hund20553 Selenicereus undatus HOM05D005283 ORTHO05D006769 2.1e-14 82.0 69 58.0
TAR633G1039 Trochodendron aralioides HOM05D005283 ORTHO05D006769 2.1e-14 82.0 88 50.0
BcaC06g32968 Brassica carinata HOM05D005283 ORTHO05D006769 2.7e-14 81.6 64 60.9
Thecc.04G285400 Theobroma cacao HOM05D005283 ORTHO05D006769 2.7e-14 81.6 69 56.5
ClCG05G006140 Citrullus lanatus HOM05D005283 ORTHO05D006769 4.7e-14 80.9 64 59.4
MELO3C006668.2 Cucumis melo HOM05D005283 ORTHO05D006769 4.7e-14 80.9 64 59.4
CsaV3_3G014700 Cucumis sativus L. HOM05D005283 ORTHO05D006769 4.7e-14 80.9 64 59.4
Cfa015392 Carpinus fangiana HOM05D005283 ORTHO05D006769 6.1e-14 80.5 59 67.8
MD08G1066800 Malus domestica HOM05D005283 ORTHO05D006769 6.1e-14 80.5 69 59.4
Cc03_g01850 Coffea canephora HOM05D005283 ORTHO05D006769 8.0e-14 80.1 72 59.7
Manes.03G195900 Manihot esculenta HOM05D005283 ORTHO05D006769 1.0e-13 79.7 71 54.9
Prupe.1G135400 Prunus persica HOM05D005283 ORTHO05D006769 1.0e-13 79.7 69 59.4
TAR362G0604 Trochodendron aralioides HOM05D005283 ORTHO05D006769 1.0e-13 79.7 59 64.4
MD13G1167900 Malus domestica HOM05D005283 ORTHO05D006769 1.4e-13 79.3 69 58.0
FAN17G2169 Fragaria x ananassa HOM05D005283 ORTHO05D006769 1.8e-13 79.0 60 63.3
Medtr4g119960 Medicago truncatula HOM05D005283 ORTHO05D006769 1.8e-13 79.0 67 58.2
AT4G15840 Arabidopsis thaliana HOM05D005283 ORTHO05D006769 2.3e-13 78.6 64 57.8
BcaC06g33444 Brassica carinata HOM05D005283 ORTHO05D006769 2.3e-13 78.6 60 61.7
A03p49360 Brassica napus HOM05D005283 ORTHO05D006769 2.3e-13 78.6 60 61.7
C07p47430 Brassica napus HOM05D005283 ORTHO05D006769 2.3e-13 78.6 60 61.7
BolC7t45270H Brassica oleracea HOM05D005283 ORTHO05D006769 2.3e-13 78.6 60 61.7
Haze_01194 Corylus avellana HOM05D005283 ORTHO05D006769 2.3e-13 78.6 59 66.1
Psat4g027360 Pisum sativum HOM05D005283 ORTHO05D006769 2.3e-13 78.6 64 57.8
PGR031G1610 Punica granatum HOM05D005283 ORTHO05D006769 2.3e-13 78.6 60 63.3
GSVIVG01017732001 Vitis vinifera HOM05D005283 ORTHO05D006769 2.3e-13 78.6 64 60.9
Carub.0007s2581 Capsella rubella HOM05D005283 ORTHO05D006769 3.0e-13 78.2 64 57.8
Duzib151G1199 Durio zibethinus HOM05D005283 ORTHO05D006769 3.0e-13 78.2 71 53.5
PSO170G5664 Papaver somniferum HOM05D005283 ORTHO05D006769 3.0e-13 78.2 58 65.5
PSO210G5109 Papaver somniferum HOM05D005283 ORTHO05D006769 3.0e-13 78.2 58 65.5
MBI18_g13696_MAGBIO Magnolia biondii HOM05D005283 ORTHO05D006769 4.0e-13 77.8 59 64.4
Potri.010G014000 Populus trichocarpa HOM05D005283 ORTHO05D006769 4.0e-13 77.8 59 66.1
Sc25g0004780 Simmondsia chinensis HOM05D005283 ORTHO05D006769 5.2e-13 77.4 60 63.3
COL.COLO4_13862 Corchorus olitorius HOM05D005283 ORTHO05D006769 6.8e-13 77.0 60 60.0
BraA03t14037Z Brassica rapa HOM05D005283 ORTHO05D006769 8.8e-13 76.6 60 60.0
TPR.G3193 Trifolium pratense HOM05D005283 ORTHO05D006769 8.8e-13 76.6 66 57.6
CARHR290370 Cardamine hirsuta HOM05D005283 ORTHO05D006769 1.5e-12 75.9 64 57.8
Sp7g14240 Schrenkiella parvula HOM05D005283 ORTHO05D006769 1.5e-12 75.9 60 60.0
Sed0007600 Sechium edule HOM05D005283 ORTHO05D006769 2.0e-12 75.5 64 56.2
ATR0796G268 Amborella trichopoda HOM05D005283 ORTHO05D006769 2.6e-12 75.1 59 61.0
CSS0043341 Camellia sinensis var. sinensis HOM05D005283 ORTHO05D006769 2.6e-12 75.1 74 54.1
Gohir.A02G049600 Gossypium hirsutum HOM05D005283 ORTHO05D006769 2.6e-12 75.1 60 58.3
Lj4g0026758 Lotus japonicus HOM05D005283 ORTHO05D006769 2.6e-12 75.1 69 56.5
Nn3g21453 Nelumbo nucifera HOM05D005283 ORTHO05D006769 3.4e-12 74.7 59 61.0
Atru.BG.90.p Acer truncatum HOM05D005283 ORTHO05D006769 4.4e-12 74.3 53 64.2
AL7G39450 Arabidopsis lyrata HOM05D005283 ORTHO05D006769 4.4e-12 74.3 64 56.2
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 4.4e-12 74.3 65 53.8
Gohir.D02G054700 Gossypium hirsutum HOM05D005283 ORTHO05D006769 7.5e-12 73.6 60 56.7
Gorai.005G060600 Gossypium raimondii HOM05D005283 ORTHO05D006769 7.5e-12 73.6 60 56.7
EL10Ac3g06605 Beta vulgaris HOM05D005283 ORTHO05D006769 9.7e-12 73.2 55 65.5
CiPaw.01G148000 Carya illinoinensis HOM05D005283 ORTHO05D006769 9.7e-12 73.2 60 63.3
QL06p009017 Quercus lobata HOM05D005283 ORTHO05D006769 9.7e-12 73.2 57 63.2
AUR62041505 Chenopodium quinoa HOM05D005283 ORTHO05D006769 1.3e-11 72.8 59 59.3
THA.LOC104820270 Tarenaya hassleriana HOM05D005283 ORTHO05D006769 1.3e-11 72.8 60 58.3
Ah.13g074630 Amaranthus hybridus HOM05D005283 ORTHO05D006769 1.7e-11 72.4 58 60.3
Phvul.003G105900 Phaseolus vulgaris HOM05D005283 ORTHO05D006769 2.2e-11 72.0 70 51.4
Oeu029706.1 Olea europaea HOM05D005283 ORTHO05D000116 2.8e-11 71.6 73 53.4
HPP92_002145 Vanilla planifolia HOM05D005283 ORTHO05D006769 3.7e-11 71.2 59 57.6
arahy.Tifrunner.gnm1.ann1.PZAP36 Arachis hypogaea HOM05D005283 ORTHO05D006769 4.8e-11 70.9 62 54.8
arahy.Tifrunner.gnm1.ann1.Z6JJZG Arachis hypogaea HOM05D005283 ORTHO05D006769 4.8e-11 70.9 62 54.8
VMungo1215G0467 Vigna mungo HOM05D005283 ORTHO05D006769 4.8e-11 70.9 64 54.7
CDE11G0961 Ceratophyllum demersum HOM05D005283 ORTHO05D006769 1.1e-10 69.7 59 57.6
DCAR_027073 Daucus carota HOM05D005283 ORTHO05D006769 1.1e-10 69.7 60 58.3
Glyma.17G026900 Glycine max HOM05D005283 ORTHO05D006769 1.4e-10 69.3 64 53.1
Glyma.07G247100 Glycine max HOM05D005283 ORTHO05D006769 7.0e-10 67.0 64 51.6
Lalb_Chr18g0051671 Lupinus albus HOM05D005283 ORTHO05D006769 2.0e-09 65.5 48 62.5
Peaxi162Scf01123g00233 Petunia axillaris HOM05D005283 ORTHO05D006769 2.0e-09 65.5 69 53.6
Migut.G00154 Erythranthe guttata HOM05D005283 ORTHO05D006769 3.5e-09 64.7 48 60.4
Os01g0932600 Oryza sativa ssp. japonica HOM05D005283 ORTHO05D006769 4.5e-09 64.3 51 56.9
MSTRG.3910 Avicennia marina HOM05D005283 ORTHO05D006769 1.0e-08 63.2 46 63.0
Zm00001eb142310 Zea mays HOM05D005283 ORTHO05D006769 1.0e-08 63.2 51 54.9
SGA_v2.0_scaffold18G08298 Striga asiatica HOM05D005283 ORTHO05D006769 3.8e-08 61.2 48 60.4
Aqoxy2G02976 Aquilegia oxysepala HOM05D005283 ORTHO05D006769 5.5e-07 57.4 50 58.0
ECA240G0403 Erigeron canadensis HOM05D005283 ORTHO05D006769 7.2e-07 57.0 49 59.2
Pp3c16_9230 Physcomitrium patens HOM05D005283 ORTHO05D006769 8.0e-06 53.5 50 50.0
unitig_748.g8731 Utricularia gibba HOM05D005283 ORTHO05D006769 8.0e-06 53.5 49 53.1


User provided reference genes

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