Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 6.5e-260 900.2 453 100.0
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 1.3e-220 769.6 454 86.1
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 8.6e-212 740.3 454 83.0
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 1.9e-211 739.2 455 83.5
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 5.6e-211 737.6 454 83.5
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 4.0e-209 731.5 453 81.9
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 8.9e-209 730.3 459 81.5
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 1.2e-208 729.9 453 81.5
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 4.4e-208 728.0 454 82.8
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 4.4e-208 728.0 455 81.8
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 5.7e-208 727.6 455 81.5
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 5.7e-208 727.6 471 79.0
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 1.7e-207 726.1 453 81.2
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 1.7e-207 726.1 453 81.2
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.2e-207 725.7 453 81.0
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 2.9e-207 725.3 453 81.7
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 2.9e-207 725.3 451 81.4
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 5.4e-206 721.1 458 81.0
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 5.4e-206 721.1 455 81.3
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 9.2e-206 720.3 453 80.6
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 1.2e-205 719.9 457 80.3
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 1.6e-205 719.5 450 80.2
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 1.6e-205 719.5 471 78.3
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 5.9e-205 717.6 452 80.8
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 1.0e-204 716.8 457 80.1
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 1.0e-204 716.8 458 79.5
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 2.3e-204 715.7 456 80.9
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 5.0e-204 714.5 459 80.6
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 5.0e-204 714.5 454 80.4
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 1.1e-203 713.4 454 81.5
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 2.5e-203 712.2 453 80.1
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 5.6e-203 711.1 455 80.2
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 5.6e-203 711.1 453 80.8
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 7.3e-203 710.7 453 79.7
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 7.3e-203 710.7 458 79.3
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 7.3e-203 710.7 454 80.0
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 1.6e-202 709.5 454 81.1
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 1.6e-202 709.5 451 80.5
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 2.1e-202 709.1 458 79.5
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 2.1e-202 709.1 470 77.7
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 3.6e-202 708.4 435 81.6
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 3.6e-202 708.4 454 80.6
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 6.2e-202 707.6 454 81.1
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 1.4e-201 706.4 453 79.9
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 1.8e-201 706.1 458 79.3
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 2.3e-201 705.7 453 79.7
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 2.3e-201 705.7 454 80.4
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 2.3e-201 705.7 453 79.5
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 5.2e-201 704.5 454 80.0
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 1.2e-200 703.4 455 79.1
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.2e-200 703.4 457 78.8
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 1.2e-200 703.4 453 79.5
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 1.5e-200 703.0 458 78.8
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 7.5e-200 700.7 459 78.0
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 7.5e-200 700.7 453 79.2
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 1.3e-199 699.9 457 78.3
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 1.7e-199 699.5 433 80.4
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 1.7e-199 699.5 452 79.0
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 2.2e-199 699.1 472 77.5
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 2.9e-199 698.7 456 78.5
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 3.7e-199 698.4 452 79.4
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 4.9e-199 698.0 434 81.6
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 8.3e-199 697.2 454 78.0
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 3.2e-198 695.3 434 81.1
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 4.1e-198 694.9 457 77.9
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 9.2e-198 693.7 454 78.0
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 2.0e-197 692.6 457 78.8
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 3.5e-197 691.8 518 72.0
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 1.7e-196 689.5 410 84.1
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 2.3e-196 689.1 434 80.2
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 3.0e-196 688.7 406 84.7
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 5.0e-196 688.0 458 78.8
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 1.1e-195 686.8 459 77.6
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 1.1e-195 686.8 458 78.6
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 1.9e-195 686.0 454 78.4
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 1.9e-195 686.0 454 78.4
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 1.2e-194 683.3 459 77.3
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 1.4e-193 679.9 361 92.0
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 5.8e-192 674.5 462 74.9
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 6.4e-191 671.0 465 76.1
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 2.3e-188 662.5 431 78.9
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.9e-187 659.4 356 90.7
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 4.3e-187 658.3 431 76.6
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 7.3e-187 657.5 461 74.2
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 3.1e-185 652.1 461 74.8
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 6.8e-185 651.0 452 76.3
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.6e-181 639.8 453 74.0
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 3.0e-180 635.6 355 87.6
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 4.7e-178 628.2 454 73.3
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 4.9e-175 618.2 331 90.6
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 1.9e-174 616.3 390 76.2
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.1e-169 600.5 331 88.2
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 2.2e-159 566.2 391 71.1
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 2.3e-156 556.2 377 70.8
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 6.7e-156 554.7 421 66.0
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 8.7e-156 554.3 381 76.1
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 2.1e-154 549.7 355 80.0
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 6.2e-154 548.1 457 66.5
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 2.9e-151 539.3 357 78.2
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 2.5e-150 536.2 392 66.1
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 2.5e-147 526.2 312 85.3
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 7.9e-141 504.6 278 88.1
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 3.8e-135 485.7 412 60.4
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 4.2e-134 482.3 297 80.1
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 1.5e-128 463.8 314 78.0
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.2e-125 454.1 331 70.7
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 2.1e-125 453.4 234 93.2
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 2.1e-125 453.4 234 93.2
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 8.0e-125 451.4 363 67.5
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.8e-122 443.0 314 72.3
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.4e-121 440.7 402 60.7
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 3.8e-111 406.0 409 49.9
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 3.6e-93 346.3 242 75.2
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 1.7e-74 284.3 316 46.2
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 6.9e-60 235.7 319 42.3
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.4e-57 227.3 401 36.2
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 3.8e-50 203.4 117 85.5
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 6.4e-50 202.6 341 36.1
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 6.4e-50 202.6 383 35.5
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 1.3e-45 188.3 102 85.3
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 1.3e-45 188.3 349 35.0
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 9.9e-43 178.7 99 85.9
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 8.4e-42 175.6 362 31.8
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 5.1e-39 166.4 149 65.8
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 2.1e-37 161.0 96 85.4
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 6.9e-36 156.0 150 60.7
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 9.1e-20 102.4 51 86.3
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 3.0e-15 87.4 62 77.4
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 8.0e-08 62.8 38 81.6
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.8e-07 61.6 42 73.8
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 1.1e-06 58.9 160 26.2


User provided reference genes

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