Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0447621 Helianthus annuus HOM05D004858 ORTHO05D005600 4.9e-51 204.1 101 100.0
Lsat_1_v5_gn_2_81581 Lactuca sativa HOM05D004858 ORTHO05D005600 3.9e-48 194.5 101 94.1
HanXRQChr07g0203771 Helianthus annuus HOM05D004858 ORTHO05D005600 3.7e-46 188.0 101 89.1
HanXRQChr09g0263081 Helianthus annuus HOM05D004858 ORTHO05D005600 3.4e-44 181.4 101 87.1
ECA238G2402 Erigeron canadensis HOM05D004858 ORTHO05D005600 6.5e-43 177.2 101 85.1
ECA232G2479 Erigeron canadensis HOM05D004858 ORTHO05D005600 7.1e-42 173.7 103 83.5
Lsat_1_v5_gn_4_159121 Lactuca sativa HOM05D004858 ORTHO05D005600 3.9e-40 167.9 101 83.2
SGA_v2.0_scaffold121G33088 Striga asiatica HOM05D004858 ORTHO05D005600 2.0e-36 155.6 102 72.5
unitig_37.g12385 Utricularia gibba HOM05D004858 ORTHO05D005600 4.5e-36 154.5 101 74.3
unitig_46.g18678 Utricularia gibba HOM05D004858 ORTHO05D005600 7.6e-36 153.7 104 75.0
CAN.G1061.6 Capsicum annuum HOM05D004858 ORTHO05D005600 1.0e-35 153.3 100 75.0
Migut.L00438 Erythranthe guttata HOM05D004858 ORTHO05D005600 1.3e-35 152.9 102 75.5
Solyc02g091880.4 Solanum lycopersicum HOM05D004858 ORTHO05D005600 1.3e-35 152.9 100 75.0
Sopen02g036450 Solanum pennellii HOM05D004858 ORTHO05D005600 1.3e-35 152.9 100 75.0
Peaxi162Scf00096g01525 Petunia axillaris HOM05D004858 ORTHO05D005600 6.5e-35 150.6 101 73.3
SalBow3G1594 Salvia bowleyana HOM05D004858 ORTHO05D005600 6.5e-35 150.6 98 76.5
SalBow3G4557 Salvia bowleyana HOM05D004858 ORTHO05D005600 6.5e-35 150.6 98 76.5
CANSAT01G1371 Cannabis sativa HOM05D004858 ORTHO05D005600 7.2e-34 147.1 101 70.3
Hma1.2p1_1953F.1_g308860 Hydrangea macrophylla HOM05D004858 ORTHO05D005600 7.2e-34 147.1 103 71.8
CSS0041224 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 4.6e-33 144.4 100 67.0
CSS0047057 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 4.6e-33 144.4 100 67.0
Peaxi162Scf00118g01314 Petunia axillaris HOM05D004858 ORTHO05D005600 4.6e-33 144.4 99 69.7
CiPaw.07G039500 Carya illinoinensis HOM05D004858 ORTHO05D005600 6.1e-33 144.1 102 70.6
Actinidia36402 Actinidia chinensis HOM05D004858 ORTHO05D005600 7.9e-33 143.7 101 72.3
Cfa006798 Carpinus fangiana HOM05D004858 ORTHO05D005600 1.3e-32 142.9 101 68.3
COL.COLO4_11647 Corchorus olitorius HOM05D004858 ORTHO05D005600 1.8e-32 142.5 102 72.5
VMungo0251G0206 Vigna mungo HOM05D004858 ORTHO05D005600 1.8e-32 142.5 102 70.6
MSTRG.23644 Avicennia marina HOM05D004858 ORTHO05D005600 2.3e-32 142.1 102 71.6
Rhsim08G0089100 Rhododendron simsii HOM05D004858 ORTHO05D005600 2.3e-32 142.1 101 70.3
Eucgr.I00649 Eucalyptus grandis HOM05D004858 ORTHO05D005600 3.0e-32 141.7 100 70.0
Gohir.A02G148000 Gossypium hirsutum HOM05D004858 ORTHO05D005600 3.0e-32 141.7 102 69.6
arahy.Tifrunner.gnm1.ann1.YV33P0 Arachis hypogaea HOM05D004858 ORTHO05D005600 6.7e-32 140.6 100 70.0
Dinv23069 Davidia involucrata HOM05D004858 ORTHO05D005600 6.7e-32 140.6 97 71.1
Gorai.003G034000 Gossypium raimondii HOM05D004858 ORTHO05D005600 8.7e-32 140.2 102 68.6
CiPaw.08G148200 Carya illinoinensis HOM05D004858 ORTHO05D005600 1.1e-31 139.8 102 67.6
MD02G1193900 Malus domestica HOM05D004858 ORTHO05D005600 1.5e-31 139.4 102 68.6
CsaV3_3G007040 Cucumis sativus L. HOM05D004858 ORTHO05D005600 2.5e-31 138.7 100 70.0
Gohir.D03G032400 Gossypium hirsutum HOM05D004858 ORTHO05D005600 2.5e-31 138.7 102 68.6
Manes.13G106700 Manihot esculenta HOM05D004858 ORTHO05D005600 2.5e-31 138.7 101 67.3
Sed0006730 Sechium edule HOM05D004858 ORTHO05D005600 2.5e-31 138.7 102 68.6
CDE01G0584 Ceratophyllum demersum HOM05D004858 ORTHO05D005600 4.3e-31 137.9 101 68.3
Duzib187G0061 Durio zibethinus HOM05D004858 ORTHO05D005600 4.3e-31 137.9 100 68.0
CDE02G3413 Ceratophyllum demersum HOM05D004858 ORTHO05D005600 7.4e-31 137.1 101 68.3
Lj4g0010254 Lotus japonicus HOM05D004858 ORTHO05D005600 7.4e-31 137.1 103 67.0
GSVIVG01006593001 Vitis vinifera HOM05D004858 ORTHO05D005600 7.4e-31 137.1 101 65.3
Os03g0772800 Oryza sativa ssp. japonica HOM05D004858 ORTHO05D005600 9.7e-31 136.7 100 69.0
PGR102G0524 Punica granatum HOM05D004858 ORTHO05D005600 9.7e-31 136.7 99 66.7
ClCG10G008050 Citrullus lanatus HOM05D004858 ORTHO05D005600 1.3e-30 136.3 100 68.0
Glyma.05G110100 Glycine max HOM05D004858 ORTHO05D005600 2.2e-30 135.6 100 67.0
Phvul.003G231600 Phaseolus vulgaris HOM05D004858 ORTHO05D005600 2.8e-30 135.2 102 67.6
QL06p038187 Quercus lobata HOM05D004858 ORTHO05D005600 2.8e-30 135.2 102 66.7
THA.LOC104804193 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 2.8e-30 135.2 100 66.0
Glyma.17G157000 Glycine max HOM05D004858 ORTHO05D005600 3.7e-30 134.8 100 67.0
Manes.12G119200 Manihot esculenta HOM05D004858 ORTHO05D005600 3.7e-30 134.8 102 66.7
Nitab4.5_0007790g0010 Nicotiana tabacum HOM05D004858 ORTHO05D005600 3.7e-30 134.8 90 73.3
Gohir.A11G210700 Gossypium hirsutum HOM05D004858 ORTHO05D005600 4.8e-30 134.4 100 68.0
TPR.G22417 Trifolium pratense HOM05D004858 ORTHO05D005600 8.2e-30 133.7 102 65.7
Medtr4g097800 Medicago truncatula HOM05D004858 ORTHO05D005600 1.1e-29 133.3 100 62.0
Lalb_Chr09g0329381 Lupinus albus HOM05D004858 ORTHO05D005600 1.4e-29 132.9 102 65.7
EL10Ac6g14949 Beta vulgaris HOM05D004858 ORTHO05D005600 1.8e-29 132.5 98 65.3
Gohir.D11G212400 Gossypium hirsutum HOM05D004858 ORTHO05D005600 1.8e-29 132.5 97 69.1
Gorai.007G228300 Gossypium raimondii HOM05D004858 ORTHO05D005600 1.8e-29 132.5 97 69.1
TAR628G1120 Trochodendron aralioides HOM05D004858 ORTHO05D005600 1.8e-29 132.5 100 65.0
Atru.chr3.1087 Acer truncatum HOM05D004858 ORTHO05D005600 2.4e-29 132.1 100 65.0
Prupe.6G213100 Prunus persica HOM05D004858 ORTHO05D005600 5.3e-29 131.0 103 66.0
FvH4_1g18620 Fragaria vesca HOM05D004858 ORTHO05D005600 6.9e-29 130.6 104 65.4
FAN19G1409 Fragaria x ananassa HOM05D004858 ORTHO05D005600 6.9e-29 130.6 104 65.4
MBI16_g31809_MAGBIO Magnolia biondii HOM05D004858 ORTHO05D005600 6.9e-29 130.6 96 63.5
Aqoxy6G01531 Aquilegia oxysepala HOM05D004858 ORTHO05D005600 9.0e-29 130.2 102 64.7
FAN26G1754 Fragaria x ananassa HOM05D004858 ORTHO05D005600 9.0e-29 130.2 104 65.4
Lalb_Chr05g0220461 Lupinus albus HOM05D004858 ORTHO05D005600 1.2e-28 129.8 104 63.5
Lalb_Chr16g0385901 Lupinus albus HOM05D004858 ORTHO05D005600 1.2e-28 129.8 102 63.7
THA.LOC104807646 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 1.2e-28 129.8 100 64.0
Carub.0007s0239 Capsella rubella HOM05D004858 ORTHO05D005600 1.5e-28 129.4 100 67.0
Ca_22084_v3 Cicer arietinum L. HOM05D004858 ORTHO05D005600 1.5e-28 129.4 106 64.2
TWI74G1540 Tripterygium wilfordii HOM05D004858 ORTHO05D005600 1.5e-28 129.4 102 63.7
TAR381G0631 Trochodendron aralioides HOM05D004858 ORTHO05D005600 1.5e-28 129.4 97 67.0
FAN23G1848 Fragaria x ananassa HOM05D004858 ORTHO05D005600 2.6e-28 128.6 104 64.4
FAN28G0049 Fragaria x ananassa HOM05D004858 ORTHO05D005600 2.6e-28 128.6 104 64.4
Sp7g35470 Schrenkiella parvula HOM05D004858 ORTHO05D005600 3.4e-28 128.3 100 66.0
Thhalv10026651m.g Eutrema salsugineum HOM05D004858 ORTHO05D005600 4.5e-28 127.9 100 66.0
Solyc03g043850.3 Solanum lycopersicum HOM05D004858 ORTHO05D005600 4.5e-28 127.9 99 63.6
Duzib147G0425 Durio zibethinus HOM05D004858 ORTHO05D005600 5.9e-28 127.5 102 64.7
THA.LOC104824932 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 5.9e-28 127.5 100 63.0
AL7G12840 Arabidopsis lyrata HOM05D004858 ORTHO05D005600 7.7e-28 127.1 100 66.0
PSO675G0895 Papaver somniferum HOM05D004858 ORTHO05D005600 7.7e-28 127.1 99 63.6
Cpa.g.sc129.47 Carica papaya HOM05D004858 ORTHO05D005600 1.3e-27 126.3 100 62.0
Duzib264G0490 Durio zibethinus HOM05D004858 ORTHO05D005600 1.3e-27 126.3 100 65.0
AUR62007965 Chenopodium quinoa HOM05D004858 ORTHO05D005600 1.7e-27 125.9 103 62.1
RcHm_v2.0_Chr2g0109411 Rosa chinensis HOM05D004858 ORTHO05D005600 1.7e-27 125.9 104 63.5
Oeu061526.2 Olea europaea HOM05D004858 ORTHO05D005600 2.9e-27 125.2 91 71.4
Potri.007G008800 Populus trichocarpa HOM05D004858 ORTHO05D005600 2.9e-27 125.2 101 60.4
A08p22870 Brassica napus HOM05D004858 ORTHO05D005600 3.8e-27 124.8 100 65.0
Cc07_g07610 Coffea canephora HOM05D004858 ORTHO05D005600 3.8e-27 124.8 102 64.7
Nitab4.5_0026287g0010 Nicotiana tabacum HOM05D004858 ORTHO05D005600 5.0e-27 124.4 89 68.5
CARHR246220 Cardamine hirsuta HOM05D004858 ORTHO05D005600 8.5e-27 123.6 100 64.0
BcaC01g00373 Brassica carinata HOM05D004858 ORTHO05D005600 1.1e-26 123.2 99 64.6
BolC3t20143H Brassica oleracea HOM05D004858 ORTHO05D005600 1.1e-26 123.2 99 64.6
Aa31LG6G14730 Aethionema arabicum HOM05D004858 ORTHO05D005600 1.4e-26 122.9 127 54.3
arahy.Tifrunner.gnm1.ann1.J6YKXI Arachis hypogaea HOM05D004858 ORTHO05D005600 1.4e-26 122.9 98 63.3
AT4G37830 Arabidopsis thaliana HOM05D004858 ORTHO05D005600 1.9e-26 122.5 100 63.0
Haze_03960 Corylus avellana HOM05D004858 ORTHO05D005600 2.5e-26 122.1 90 67.8
Ciclev10026828m.g Citrus clementina HOM05D004858 ORTHO05D005600 3.2e-26 121.7 100 62.0
DCAR_021459 Daucus carota HOM05D004858 ORTHO05D005600 3.2e-26 121.7 99 61.6
Nn6g34570 Nelumbo nucifera HOM05D004858 ORTHO05D005600 3.2e-26 121.7 97 64.9
Sc16g0000840 Simmondsia chinensis HOM05D004858 ORTHO05D005600 3.2e-26 121.7 96 62.5
MBI16_g05028_MAGBIO Magnolia biondii HOM05D004858 ORTHO05D005600 5.5e-26 120.9 97 62.9
Oeu014311.1 Olea europaea HOM05D004858 ORTHO05D005600 7.2e-26 120.6 91 67.0
C01p01370 Brassica napus HOM05D004858 ORTHO05D005600 9.4e-26 120.2 100 60.0
DCAR_025838 Daucus carota HOM05D004858 ORTHO05D005600 1.2e-25 119.8 89 62.9
TWI77G0309 Tripterygium wilfordii HOM05D004858 ORTHO05D005600 1.6e-25 119.4 97 58.8
BolC1t00134H Brassica oleracea HOM05D004858 ORTHO05D005600 3.6e-25 118.2 100 59.0
MD15G1304000 Malus domestica HOM05D004858 ORTHO05D005600 4.6e-25 117.9 102 62.7
HPP92_024955 Vanilla planifolia HOM05D004858 ORTHO05D005600 1.8e-24 115.9 105 53.3
CiPaw.10G150100 Carya illinoinensis HOM05D004858 ORTHO05D005600 3.0e-24 115.2 75 68.0
Dinv26980 Davidia involucrata HOM05D004858 ORTHO05D005600 5.1e-24 114.4 86 67.4
PGSC0003DMG400017913 Solanum tuberosum HOM05D004858 ORTHO05D005600 5.1e-24 114.4 89 64.0
PGSC0003DMG400030258 Solanum tuberosum HOM05D004858 ORTHO05D005600 2.0e-23 112.5 91 64.8
Zm00001eb058950 Zea mays HOM05D004858 ORTHO05D005600 2.0e-23 112.5 91 63.7
Nn5g30705 Nelumbo nucifera HOM05D004858 ORTHO05D005600 9.7e-23 110.2 89 62.9
Thecc.01G079800 Theobroma cacao HOM05D004858 ORTHO05D005600 9.7e-23 110.2 90 64.4
CSS0011371 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 1.7e-22 109.4 89 62.9
ATR0767G115 Amborella trichopoda HOM05D004858 ORTHO05D005600 8.2e-22 107.1 88 58.0
PGSC0003DMG400030628 Solanum tuberosum HOM05D004858 ORTHO05D005600 2.4e-21 105.5 109 55.0
Nitab4.5_0000396g0060 Nicotiana tabacum HOM05D004858 ORTHO05D005600 4.1e-21 104.8 75 72.0
AUR62003145 Chenopodium quinoa HOM05D004858 ORTHO05D005600 1.2e-20 103.2 91 59.3
HPP92_021258 Vanilla planifolia HOM05D000682 ORTHO05D000510 1.2e-20 103.2 75 61.3
Psat4g088320 Pisum sativum HOM05D004858 ORTHO05D005600 1.5e-20 102.8 91 60.4
Sabra07G0006800 Salix brachista HOM05D004858 ORTHO05D005600 2.6e-20 102.1 89 57.3
vmacro18001 Vaccinium macrocarpon HOM05D004858 ORTHO05D005600 9.4e-18 93.6 50 80.0
CSS0003752 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 3.6e-17 91.7 74 62.2
Nitab4.5_0002639g0030 Nicotiana tabacum HOM05D004858 ORTHO05D005600 6.1e-17 90.9 75 65.3
Mapoly0043s0104 Marchantia polymorpha HOM05D004858 ORTHO05D005600 7.9e-17 90.5 89 51.7
MELO3C014946.2 Cucumis melo HOM05D004858 ORTHO05D005600 2.2e-14 82.4 75 61.3
Ah.03g139600 Amaranthus hybridus HOM05D004858 ORTHO05D005600 1.8e-13 79.3 71 57.7
BraA01t00120Z Brassica rapa HOM05D004858 ORTHO05D005600 3.1e-13 78.6 103 47.6
Hund16598 Selenicereus undatus HOM05D004858 ORTHO05D005600 5.3e-13 77.8 71 59.2
Sc03g0000690 Simmondsia chinensis HOM05D004858 ORTHO05D005600 1.2e-12 76.6 75 57.3
Pp3c5_3360 Physcomitrium patens HOM05D004858 ORTHO05D005600 3.5e-12 75.1 98 41.8
BraA08t34250Z Brassica rapa HOM05D004858 ORTHO05D005600 5.0e-11 71.2 75 56.0
AagrBONN_evm.TU.Sc2ySwM_344.1653 Anthoceros agrestis HOM05D004858 ORTHO05D005600 6.5e-11 70.9 90 45.6
C03p79020 Brassica napus HOM05D004858 ORTHO05D005600 8.5e-11 70.5 74 56.8
CBR_g50891 Chara braunii HOM05D004858 ORTHO05D005600 1.1e-10 70.1 107 39.3
vmacro22430 Vaccinium macrocarpon HOM05D004858 ORTHO05D005600 3.0e-08 62.0 35 77.1
Pp3c13_15160 Physcomitrium patens HOM05D004858 ORTHO05D005600 8.8e-08 60.5 67 41.8
Pp3c6_25050 Physcomitrium patens HOM05D004858 ORTHO05D005600 4.4e-07 58.2 86 36.0
SHI12046 Sapria himalayana HOM05D004858 ORTHO05D005600 3.7e-06 55.1 42 59.5


User provided reference genes

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