Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 8.0e-124 448.7 703 100.0
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 7.9e-55 219.5 705 84.1
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 1.1e-51 209.1 684 83.5
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 2.7e-47 194.5 176 63.1
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 2.5e-45 188.0 691 80.3
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 3.3e-45 187.6 134 72.4
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 1.8e-43 181.8 167 59.9
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 1.5e-42 178.7 126 68.3
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 1.5e-42 178.7 126 68.3
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 2.6e-42 177.9 654 85.2
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 7.7e-42 176.4 651 82.8
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.3e-41 175.6 702 74.8
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 2.2e-41 174.9 138 63.8
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 2.2e-41 174.9 146 62.3
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 6.5e-41 173.3 698 79.9
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 1.4e-40 172.2 171 53.8
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 3.2e-40 171.0 652 82.2
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 4.2e-40 170.6 125 68.8
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 4.6e-39 167.2 686 79.3
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 6.1e-39 166.8 174 53.4
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 6.1e-39 166.8 155 58.7
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 1.0e-38 166.0 172 55.2
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 1.8e-38 165.2 679 81.0
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 3.0e-38 164.5 655 81.5
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 5.1e-38 163.7 156 55.1
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 5.1e-38 163.7 655 81.5
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 5.1e-38 163.7 135 62.2
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 6.7e-38 163.3 655 81.1
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 8.8e-38 162.9 139 61.2
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 1.1e-37 162.5 129 61.2
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 1.1e-37 162.5 645 82.6
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 4.4e-37 160.6 147 57.1
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 7.4e-37 159.8 651 83.6
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 7.4e-37 159.8 127 63.8
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 1.3e-36 159.1 159 54.7
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 1.3e-36 159.1 130 63.1
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 2.8e-36 157.9 690 80.6
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 3.7e-36 157.5 172 52.9
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 4.8e-36 157.1 167 52.7
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 6.3e-36 156.8 675 79.4
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 8.2e-36 156.4 148 56.1
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 1.4e-35 155.6 185 48.6
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.4e-35 155.6 185 48.6
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 1.8e-35 155.2 136 58.8
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 1.8e-35 155.2 133 58.6
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 1.8e-35 155.2 648 80.4
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 2.4e-35 154.8 135 58.5
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 3.1e-35 154.5 148 54.7
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 3.1e-35 154.5 703 67.3
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 4.1e-35 154.1 140 57.1
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 4.1e-35 154.1 140 57.1
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 5.3e-35 153.7 146 55.5
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 5.3e-35 153.7 140 57.1
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 6.9e-35 153.3 145 55.2
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 6.9e-35 153.3 145 55.2
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 3.4e-34 151.0 146 55.5
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 7.7e-34 149.8 147 54.4
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 1.0e-33 149.4 658 71.4
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 1.0e-33 149.4 140 55.7
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 1.0e-33 149.4 148 52.7
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 5.0e-33 147.1 148 52.0
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 5.0e-33 147.1 650 76.6
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 5.0e-33 147.1 673 74.3
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 5.0e-33 147.1 673 74.3
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 6.5e-33 146.7 133 57.9
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 6.5e-33 146.7 650 78.6
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 8.5e-33 146.4 166 49.4
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 1.4e-32 145.6 170 46.5
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 1.4e-32 145.6 147 53.1
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.4e-32 145.6 188 45.2
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 4.2e-32 144.1 148 52.7
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 7.2e-32 143.3 138 56.5
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 1.2e-31 142.5 141 52.5
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 1.6e-31 142.1 117 61.5
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.7e-31 140.6 111 63.1
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 6.1e-31 140.2 117 60.7
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 6.1e-31 140.2 685 77.1
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 7.9e-31 139.8 141 51.1
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 7.9e-31 139.8 141 51.1
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 1.0e-30 139.4 620 83.9
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.4e-30 139.0 111 62.2
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.4e-30 139.0 108 63.0
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 3.3e-29 134.4 106 66.0
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 4.4e-29 134.0 111 60.4
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 4.8e-28 130.6 139 48.2
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 1.6e-26 125.6 101 63.4
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 1.3e-25 122.5 98 62.2
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 5.0e-25 120.6 85 71.8
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 5.0e-25 120.6 92 57.6
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 5.0e-25 120.6 650 78.8
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 6.5e-25 120.2 94 54.3
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 1.1e-24 119.4 145 43.4
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 1.1e-24 119.4 81 67.9
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 3.2e-24 117.9 140 47.9
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 1.6e-23 115.5 102 57.8
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 2.7e-23 114.8 95 52.6
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 1.0e-22 112.8 183 42.1
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 2.8e-20 104.8 139 47.5
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 6.3e-20 103.6 139 46.8
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 1.8e-19 102.1 82 53.7
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.1e-19 101.3 70 70.0
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 7.0e-19 100.1 184 39.7
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.1e-16 92.8 70 64.3
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 1.2e-15 89.4 66 60.6
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 5.2e-14 84.0 93 45.2
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 5.2e-14 84.0 93 45.2
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 6.8e-14 83.6 95 38.9
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 1.8e-11 75.5 56 64.3
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 7.0e-11 73.6 94 41.5
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.9e-10 70.5 60 50.0
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 1.0e-09 69.7 80 43.8
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.0e-09 67.4 50 60.0
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 1.9e-08 65.5 129 32.6
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 1.9e-08 65.5 129 32.6


User provided reference genes

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