Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 2.2e-117 425.6 209 100.0
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 2.0e-75 286.2 175 79.4
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 1.7e-74 283.1 181 80.1
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 9.5e-65 250.8 174 70.7
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 6.2e-64 248.1 173 69.9
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 4.0e-63 245.4 177 68.4
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 1.2e-62 243.8 180 67.8
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 2.2e-61 239.6 175 64.0
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 2.9e-61 239.2 142 76.1
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 2.9e-61 239.2 195 62.6
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 3.7e-61 238.8 152 74.3
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 1.4e-60 236.9 180 64.4
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 1.4e-60 236.9 174 67.2
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 5.4e-60 235.0 171 66.1
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 3.5e-59 232.3 169 64.5
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 7.8e-59 231.1 170 62.4
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 7.8e-59 231.1 157 71.3
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 1.0e-58 230.7 168 67.9
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 1.7e-58 229.9 166 66.3
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 2.3e-58 229.6 167 68.3
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 2.3e-58 229.6 178 62.9
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 5.1e-58 228.4 170 67.1
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 8.6e-58 227.6 172 64.0
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 8.6e-58 227.6 173 65.9
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 1.5e-57 226.9 168 64.3
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 2.5e-57 226.1 168 64.3
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 2.5e-57 226.1 186 59.7
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 2.5e-57 226.1 152 71.1
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 3.3e-57 225.7 168 63.7
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 4.3e-57 225.3 158 63.3
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 4.3e-57 225.3 139 71.9
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 4.3e-57 225.3 174 62.1
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 9.5e-57 224.2 173 63.0
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 9.5e-57 224.2 170 60.6
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.2e-56 223.8 173 63.0
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.2e-56 223.8 171 62.6
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 2.1e-56 223.0 174 59.2
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 2.1e-56 223.0 170 64.1
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 2.8e-56 222.6 168 63.7
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 2.8e-56 222.6 170 61.8
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 2.8e-56 222.6 135 73.3
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.1e-55 220.7 169 63.9
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 1.1e-55 220.7 150 70.0
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.1e-55 220.7 176 61.9
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.1e-55 220.7 176 61.9
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 1.4e-55 220.3 174 60.3
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 1.4e-55 220.3 174 60.3
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 1.8e-55 219.9 156 64.7
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 1.8e-55 219.9 133 72.2
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 2.3e-55 219.5 193 56.0
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 4.0e-55 218.8 168 63.1
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 5.2e-55 218.4 140 70.7
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 1.2e-54 217.2 170 60.6
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 2.0e-54 216.5 169 63.3
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 3.4e-54 215.7 142 72.5
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 5.8e-54 214.9 174 59.2
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 9.9e-54 214.2 141 68.1
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 1.7e-53 213.4 156 64.7
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 2.9e-53 212.6 139 71.9
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 2.9e-53 212.6 146 66.4
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 3.7e-53 212.2 133 69.2
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 4.9e-53 211.8 171 60.2
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 4.9e-53 211.8 195 55.9
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 1.1e-52 210.7 215 53.5
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 1.1e-52 210.7 172 59.9
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 3.2e-52 209.1 115 80.0
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 4.1e-52 208.8 141 66.0
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 5.4e-52 208.4 224 51.3
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 7.1e-52 208.0 122 76.2
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 1.2e-51 207.2 125 74.4
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.6e-51 206.8 137 70.1
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 2.1e-51 206.5 155 63.9
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 2.1e-51 206.5 155 64.5
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 3.0e-50 202.6 174 61.5
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 3.0e-50 202.6 177 58.2
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 4.3e-49 198.7 135 66.7
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 7.3e-49 198.0 165 55.2
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 9.5e-49 197.6 106 80.2
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.6e-48 196.8 141 67.4
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 1.1e-47 194.1 106 76.4
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 6.8e-47 191.4 130 69.2
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 2.0e-46 189.9 156 59.0
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 2.6e-46 189.5 106 74.5
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 2.6e-46 189.5 147 63.3
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 3.4e-46 189.1 195 51.3
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 3.2e-44 182.6 101 77.2
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 4.6e-43 178.7 107 72.9
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 9.9e-38 161.0 92 73.9
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 1.3e-37 160.6 107 70.1
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 3.8e-37 159.1 129 57.4
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 9.3e-36 154.5 108 63.0
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 2.1e-35 153.3 120 60.8
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 6.0e-35 151.8 134 60.4
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 1.7e-34 150.2 137 55.5
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 5.1e-34 148.7 162 48.8
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 1.1e-33 147.5 115 57.4
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 8.1e-32 141.4 89 67.4
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 2.4e-28 129.8 106 62.3
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 3.2e-28 129.4 132 50.0
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 2.1e-27 126.7 69 79.7
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 1.9e-25 120.2 150 41.3
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 2.5e-25 119.8 89 55.1
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 4.8e-24 115.5 58 86.2
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 1.8e-23 113.6 101 57.4
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 1.1e-17 94.4 89 47.2
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 4.5e-14 82.4 92 48.9
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 9.0e-07 58.2 42 59.5


User provided reference genes

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