Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0446721 Helianthus annuus HOM05D006218 ORTHO05D007338 9.3e-92 340.1 164 100.0
ECA247G3408 Erigeron canadensis HOM05D006218 ORTHO05D007338 1.7e-45 186.4 151 60.3
Lsat_1_v5_gn_2_69281 Lactuca sativa HOM05D006218 ORTHO05D007338 1.9e-44 183.0 152 58.6
HanXRQChr03g0064651 Helianthus annuus HOM05D006218 ORTHO05D007338 1.6e-38 163.3 85 92.9
Rhsim10G0062900 Rhododendron simsii HOM05D006218 ORTHO05D007338 2.7e-38 162.5 112 64.3
EL10Ac4g09913 Beta vulgaris HOM05D006218 ORTHO05D007338 1.0e-37 160.6 107 63.6
Dinv31962 Davidia involucrata HOM05D006218 ORTHO05D007338 1.0e-37 160.6 132 58.3
QL02p015096 Quercus lobata HOM05D006218 ORTHO05D007338 2.3e-37 159.5 101 69.3
DCAR_006421 Daucus carota HOM05D006218 ORTHO05D007338 8.6e-37 157.5 101 69.3
Rhsim10G0066100 Rhododendron simsii HOM05D006218 ORTHO05D007338 1.5e-36 156.8 112 62.5
Duzib093G0304 Durio zibethinus HOM05D006218 ORTHO05D007338 1.9e-36 156.4 112 63.4
GSVIVG01013390001 Vitis vinifera HOM05D006218 ORTHO05D007338 2.5e-36 156.0 105 66.7
TWI39G0099 Tripterygium wilfordii HOM05D006218 ORTHO05D007338 5.6e-36 154.8 112 60.7
Ah.04g161150 Amaranthus hybridus HOM05D006218 ORTHO05D007338 1.2e-35 153.7 104 65.4
QL02p015030 Quercus lobata HOM05D006218 ORTHO05D007338 1.2e-35 153.7 95 71.6
Thecc.08G062100 Theobroma cacao HOM05D006218 ORTHO05D007338 1.2e-35 153.7 100 67.0
RcHm_v2.0_Chr7g0215761 Rosa chinensis HOM05D006218 ORTHO05D007338 2.8e-35 152.5 111 61.3
Medtr2g100200 Medicago truncatula HOM05D006218 ORTHO05D007338 1.8e-34 149.8 112 60.7
Sed0014170 Sechium edule HOM05D006218 ORTHO05D007338 4.0e-34 148.7 106 64.2
TPR.G6568 Trifolium pratense HOM05D006218 ORTHO05D007338 4.0e-34 148.7 112 58.9
CsaV3_4G037400 Cucumis sativus L. HOM05D006218 ORTHO05D007338 6.8e-34 147.9 106 63.2
PGR083G1452 Punica granatum HOM05D006218 ORTHO05D007338 6.8e-34 147.9 96 67.7
MELO3C017038.2 Cucumis melo HOM05D006218 ORTHO05D007338 8.9e-34 147.5 106 63.2
AUR62005208 Chenopodium quinoa HOM05D006218 ORTHO05D007338 1.5e-33 146.7 105 60.0
Gohir.D05G181600 Gossypium hirsutum HOM05D006218 ORTHO05D007338 1.5e-33 146.7 93 69.9
RcHm_v2.0_Chr6g0271871 Rosa chinensis HOM05D006218 ORTHO05D007338 1.5e-33 146.7 96 66.7
CSS0036772 Camellia sinensis var. sinensis HOM05D006218 ORTHO05D007338 2.0e-33 146.4 98 65.3
CiPaw.08G075100 Carya illinoinensis HOM05D006218 ORTHO05D007338 2.0e-33 146.4 96 64.6
CSS0043525 Camellia sinensis var. sinensis HOM05D006218 ORTHO05D007338 2.6e-33 146.0 96 66.7
Hma1.2p1_0060F.1_g032840 Hydrangea macrophylla HOM05D006218 ORTHO05D007338 2.6e-33 146.0 106 60.4
ClCG11G018820 Citrullus lanatus HOM05D006218 ORTHO05D007338 4.4e-33 145.2 106 61.3
Gorai.009G186600 Gossypium raimondii HOM05D006218 ORTHO05D007338 4.4e-33 145.2 92 69.6
Cfa013418 Carpinus fangiana HOM05D000602 ORTHO05D007338 1.3e-32 143.7 110 57.3
Prupe.5G009500 Prunus persica HOM05D006218 ORTHO05D007338 1.3e-32 143.7 95 66.3
SHI24507 Sapria himalayana HOM05D006218 ORTHO05D007338 2.9e-32 142.5 137 48.9
HPP92_001390 Vanilla planifolia HOM05D006218 ORTHO05D007338 2.9e-32 142.5 132 52.3
Thhalv10003177m.g Eutrema salsugineum HOM05D006218 ORTHO05D007338 8.3e-32 141.0 114 55.3
MD16G1284000 Malus domestica HOM05D006218 ORTHO05D007338 1.4e-31 140.2 93 63.4
Atru.BG.229.p Acer truncatum HOM05D006218 ORTHO05D007338 2.4e-31 139.4 112 59.8
Ciclev10000757m.g Citrus clementina HOM05D006218 ORTHO05D007338 3.2e-31 139.0 96 63.5
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 5.4e-31 138.3 109 61.5
CANSAT80G1826 Cannabis sativa HOM05D006218 ORTHO05D007338 7.0e-31 137.9 98 57.1
FvH4_5g25520 Fragaria vesca HOM05D006218 ORTHO05D007338 7.0e-31 137.9 107 60.7
Duzib041G0398 Durio zibethinus HOM05D006218 ORTHO05D007338 1.7e-29 133.3 89 66.3
Cc00_g16990 Coffea canephora HOM05D006218 ORTHO05D007338 6.6e-29 131.3 112 53.6
FAN08G1989 Fragaria x ananassa HOM05D006218 ORTHO05D007338 6.6e-29 131.3 88 67.0
SGA_v2.0_scaffold21G09648 Striga asiatica HOM05D006218 ORTHO05D007338 2.8e-27 125.9 94 56.4
Haze_21910 Corylus avellana HOM05D000602 ORTHO05D002639 4.7e-27 125.2 129 48.8
FvH4_5g24880 Fragaria vesca HOM05D006218 ORTHO05D007338 4.0e-26 122.1 118 51.7
Sopen02g018380 Solanum pennellii HOM05D006218 ORTHO05D007338 6.4e-24 114.8 110 50.9
AUR62000761 Chenopodium quinoa HOM05D006218 ORTHO05D007338 1.9e-23 113.2 72 66.7
HanXRQChr15g0480181 Helianthus annuus HOM05D017474 ORTHO05D011180 4.6e-22 108.6 60 85.0
Migut.O00315 Erythranthe guttata HOM05D006218 ORTHO05D007338 1.9e-20 103.2 76 61.8
Sc16g0011970 Simmondsia chinensis HOM05D006218 ORTHO05D007338 6.2e-19 98.2 66 68.2
PGSC0003DMG400021154 Solanum tuberosum HOM05D006218 ORTHO05D007338 1.4e-18 97.1 124 41.9
RcHm_v2.0_Chr7g0215901 Rosa chinensis HOM05D006218 ORTHO05D007338 6.8e-18 94.7 112 42.9
SalBow6G0752 Salvia bowleyana HOM05D006218 ORTHO05D007338 4.9e-16 88.6 66 59.1
FAN08G0845 Fragaria x ananassa HOM05D006218 ORTHO05D007338 2.4e-15 86.3 108 41.7
RcHm_v2.0_Chr7g0219831 Rosa chinensis HOM05D006218 ORTHO05D007338 2.4e-15 86.3 148 32.4
Lsat_1_v5_gn_9_33960 Lactuca sativa HOM05D006218 ORTHO05D007338 6.0e-14 81.6 89 49.4
FAN08G1712 Fragaria x ananassa HOM05D006218 ORTHO05D007338 3.9e-13 79.0 110 37.3
Oeu013581.1 Olea europaea HOM05D006218 ORTHO05D007338 1.5e-12 77.0 94 42.6
Hma1.2p1_0612F.1_g188870 Hydrangea macrophylla HOM05D006218 ORTHO05D007338 2.1e-11 73.2 63 46.0
FvH4_5g25350 Fragaria vesca HOM05D006218 ORTHO05D007338 6.2e-11 71.6 91 40.7
FAN18G0123 Fragaria x ananassa HOM05D006218 ORTHO05D007338 2.4e-10 69.7 91 39.6
Ca_01194_v3 Cicer arietinum L. HOM05D006218 ORTHO05D007338 1.2e-09 67.4 53 56.6
Aqoxy6G01612 Aquilegia oxysepala HOM05D006218 ORTHO05D007338 7.6e-09 64.7 43 67.4
MSTRG.24922 Avicennia marina HOM05D006218 ORTHO05D007338 2.2e-08 63.2 41 70.7
CAN.G479.71 Capsicum annuum HOM05D007173 ORTHO05D009151 4.9e-08 62.0 112 26.8
Sopen10g021030 Solanum pennellii HOM05D007173 ORTHO05D009151 8.4e-08 61.2 112 26.8
PGSC0003DMG401009781 Solanum tuberosum HOM05D007173 ORTHO05D009151 8.4e-08 61.2 112 26.8
Migut.D00798 Erythranthe guttata HOM05D007173 ORTHO05D009151 1.4e-07 60.5 108 27.8
Oeu014607.1 Olea europaea HOM05D007173 ORTHO05D009151 1.4e-07 60.5 86 33.7
CAN.G930.13 Capsicum annuum HOM05D007173 ORTHO05D009151 1.9e-07 60.1 112 26.8
Actinidia37914 Actinidia chinensis HOM05D006218 ORTHO05D007338 2.4e-07 59.7 35 74.3
Solyc10g049570.3 Solanum lycopersicum HOM05D007173 ORTHO05D009151 4.2e-07 58.9 107 27.1
FAN08G2598 Fragaria x ananassa HOM05D000424 ORTHO05D000355 5.4e-07 58.5 125 25.6
Peaxi162Scf00231g00042 Petunia axillaris HOM05D007173 ORTHO05D009151 9.3e-07 57.8 111 27.0
SalBow7G3017 Salvia bowleyana HOM05D007173 ORTHO05D009151 9.3e-07 57.8 84 28.6
Sed0008418 Sechium edule HOM05D007173 ORTHO05D009151 1.2e-06 57.4 84 31.0
Lj4P809T22 Lonicera japonica HOM05D006218 ORTHO05D007338 2.1e-06 56.6 34 70.6
QL10p041753 Quercus lobata HOM05D007173 ORTHO05D009151 2.1e-06 56.6 85 30.6
CDE02G2496 Ceratophyllum demersum HOM05D006218 ORTHO05D007338 2.7e-06 56.2 35 65.7
VMungo1215G1169 Vigna mungo HOM05D007173 ORTHO05D009151 4.6e-06 55.5 112 25.9
CiPaw.03G118400 Carya illinoinensis HOM05D007173 ORTHO05D009151 7.8e-06 54.7 85 29.4
Rhsim10G0063100 Rhododendron simsii HOM05D006218 ORTHO05D007338 7.8e-06 54.7 35 65.7
HPP92_013057 Vanilla planifolia HOM05D006218 ORTHO05D007338 7.8e-06 54.7 40 57.5


User provided reference genes

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