Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 0.0e+00 1318.9 805 100.0
ECA238G3001 Erigeron canadensis HOM05D004210 ORTHO05D005017 9.6e-190 667.9 833 49.8
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 2.2e-186 656.8 502 65.3
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 1.3e-183 647.5 487 66.7
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 1.8e-183 647.1 503 66.0
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 1.5e-182 644.0 491 66.6
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 1.5e-182 644.0 502 64.9
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 1.5e-182 644.0 478 68.0
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 2.5e-182 643.3 504 64.1
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 2.5e-182 643.3 487 66.1
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 3.3e-182 642.9 500 65.0
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 1.3e-181 641.0 503 63.6
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 2.8e-181 639.8 479 66.6
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 6.2e-181 638.6 478 66.7
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 8.2e-181 638.3 491 65.4
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 1.4e-180 637.5 500 65.4
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 1.8e-180 637.1 488 65.2
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 5.3e-180 635.6 480 66.2
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 6.9e-180 635.2 501 64.1
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 6.9e-180 635.2 484 65.9
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 9.0e-180 634.8 486 64.8
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 2.0e-179 633.6 486 64.4
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 2.6e-179 633.3 503 63.2
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 4.5e-179 632.5 506 63.8
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 5.8e-179 632.1 502 62.5
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 7.6e-179 631.7 486 64.4
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 7.6e-179 631.7 486 64.4
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 1.0e-178 631.3 497 65.4
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 1.0e-178 631.3 485 66.2
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 1.7e-178 630.6 480 66.5
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 2.2e-178 630.2 484 65.5
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 4.9e-178 629.0 504 63.9
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 4.9e-178 629.0 486 64.2
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 4.9e-178 629.0 480 66.2
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 4.9e-178 629.0 501 63.9
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 1.9e-177 627.1 479 65.8
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.2e-177 626.3 491 63.7
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 4.2e-177 625.9 486 65.0
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 2.1e-176 623.6 503 62.4
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 2.1e-176 623.6 487 64.9
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 3.5e-176 622.9 500 63.2
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 4.6e-176 622.5 483 64.0
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 6.0e-176 622.1 500 63.4
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 7.9e-176 621.7 500 63.2
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 1.0e-175 621.3 487 64.3
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 3.0e-175 619.8 487 63.9
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 5.1e-175 619.0 472 65.5
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 6.7e-175 618.6 480 63.8
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 6.7e-175 618.6 487 63.9
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 5.7e-174 615.5 499 63.5
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 7.4e-174 615.1 499 63.3
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 9.7e-174 614.8 500 62.4
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 1.3e-173 614.4 500 62.0
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 1.3e-173 614.4 488 64.1
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 2.2e-173 613.6 499 62.5
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 2.8e-173 613.2 489 63.8
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 2.8e-173 613.2 485 65.4
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 3.7e-173 612.8 473 64.9
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 4.8e-173 612.5 499 62.5
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 6.3e-173 612.1 501 61.9
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 8.2e-173 611.7 507 61.3
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 3.1e-172 609.8 502 62.2
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 5.3e-172 609.0 499 61.7
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 2.6e-171 606.7 473 64.5
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 4.5e-171 605.9 512 60.4
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 7.6e-171 605.1 512 60.4
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 7.6e-171 605.1 487 62.0
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 2.2e-170 603.6 483 63.8
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 3.8e-170 602.8 486 63.6
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 5.0e-170 602.4 478 64.2
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.9e-169 600.5 488 62.3
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 2.5e-169 600.1 503 61.4
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 9.3e-169 598.2 486 61.5
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 1.6e-168 597.4 498 60.6
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 2.1e-168 597.0 500 61.4
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 2.7e-168 596.7 498 60.6
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 3.6e-168 596.3 499 60.5
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 6.1e-168 595.5 463 64.4
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 2.3e-167 593.6 477 61.8
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 2.3e-167 593.6 479 62.6
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 3.0e-167 593.2 493 61.9
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 3.9e-167 592.8 487 61.8
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 6.7e-167 592.0 497 60.6
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 6.7e-167 592.0 495 60.4
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 6.7e-167 592.0 488 60.9
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 1.1e-166 591.3 499 60.1
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 1.5e-166 590.9 477 61.2
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 1.9e-166 590.5 482 61.2
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 2.5e-166 590.1 493 61.5
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 2.5e-166 590.1 477 62.5
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 3.3e-166 589.7 496 60.7
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 7.4e-166 588.6 489 60.9
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 1.3e-165 587.8 497 60.6
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 1.3e-165 587.8 493 61.3
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 6.3e-165 585.5 488 60.5
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 6.3e-165 585.5 509 59.7
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 8.2e-165 585.1 496 59.3
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 1.8e-164 583.9 489 59.5
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 2.4e-164 583.6 454 64.1
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 7.7e-163 578.6 501 60.1
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 1.3e-162 577.8 501 59.7
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.3e-162 577.8 535 56.4
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 1.7e-162 577.4 492 58.7
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 2.2e-162 577.0 473 60.5
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 2.2e-162 577.0 473 60.5
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 3.2e-161 573.2 463 63.7
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 5.5e-161 572.4 499 59.9
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 2.1e-160 570.5 474 61.0
Manes.13G077346 Manihot esculenta HOM05D004210 ORTHO05D005017 7.9e-160 568.5 412 67.7
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 1.4e-159 567.8 499 59.7
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 2.0e-158 563.9 587 54.2
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 2.8e-157 560.1 475 60.0
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 3.7e-157 559.7 472 61.2
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 4.1e-156 556.2 481 61.1
SGA_v2.0_scaffold196G40978 Striga asiatica HOM05D004210 ORTHO05D005017 1.5e-155 554.3 484 59.3
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 1.3e-154 551.2 448 63.2
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 1.1e-153 548.1 463 60.5
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 9.4e-153 545.0 463 60.3
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 2.3e-151 540.4 438 62.1
AL249U10010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 5.2e-151 539.3 406 64.8
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 2.6e-147 526.9 459 59.7
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 3.6e-144 516.5 483 55.3
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 1.7e-141 507.7 479 52.8
Pp3c12_14420 Physcomitrium patens HOM05D004210 ORTHO05D005017 2.7e-136 490.3 462 53.5
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 1.8e-135 487.6 450 53.8
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 2.3e-135 487.3 507 52.1
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 4.0e-135 486.5 483 55.1
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 9.8e-126 455.3 455 53.2
AagrBONN_evm.TU.Sc2ySwM_344.4521 Anthoceros agrestis HOM05D004210 ORTHO05D005017 6.6e-122 442.6 508 47.0
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 4.7e-120 436.4 455 53.0
AagrBONN_evm.TU.Sc2ySwM_368.940 Anthoceros agrestis HOM05D004210 ORTHO05D005017 5.8e-118 429.5 470 47.7
SMO145G0186 Selaginella moellendorffii HOM05D004210 ORTHO05D005017 1.7e-117 427.9 437 50.8
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 4.3e-113 413.3 357 59.9
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 4.7e-112 409.8 465 52.3
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 8.9e-111 405.6 316 65.5
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.2e-110 405.2 361 58.4
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 2.3e-106 391.0 313 62.0
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 1.9e-105 387.9 389 55.3
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 3.1e-95 354.0 380 53.2
CBR_g18561 Chara braunii HOM05D004210 ORTHO05D005017 5.6e-89 333.2 505 38.8
CBR_g10843 Chara braunii HOM05D004210 ORTHO05D005017 1.2e-88 332.0 506 38.7
SEGI_20000 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 4.9e-85 320.1 310 51.9
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 3.0e-58 231.1 394 41.1
MBI16_g14436_MAGBIO Magnolia biondii HOM05D004210 ORTHO05D005017 6.7e-58 229.9 221 54.8
Cre03.g195750 Chlamydomonas reinhardtii HOM05D004210 ORTHO05D005017 6.9e-55 219.9 464 31.5
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 1.1e-52 212.6 157 67.5
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 1.0e-50 206.1 168 58.3
MCO03G571 Micromonas commoda HOM05D004210 ORTHO05D005017 1.6e-43 182.2 391 30.9
PRCOL_00000885 Prasinoderma coloniale HOM05D004210 ORTHO05D005017 3.6e-43 181.0 488 29.1
Pp3c4_7580 Physcomitrium patens HOM05D004210 ORTHO05D005017 1.8e-42 178.7 275 37.8
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 5.7e-41 173.7 111 75.7
Atru.chr12.1163 Acer truncatum HOM05D004210 ORTHO05D005017 7.0e-39 166.8 91 80.2
Cfa023087 Carpinus fangiana HOM05D004210 ORTHO05D005017 7.7e-38 163.3 398 28.6
Glyma.12G171232 Glycine max HOM05D004210 ORTHO05D013328 2.1e-35 155.2 96 70.8
Aa31LG8G7760 Aethionema arabicum HOM05D004210 ORTHO05D005017 2.8e-32 144.8 118 60.2
VMungo1127G1364 Vigna mungo HOM05D004210 ORTHO05D005017 4.5e-30 137.5 166 45.8
Dinv18721 Davidia involucrata HOM05D004210 ORTHO05D005017 3.2e-20 104.8 142 47.9
Manes.13G077544 Manihot esculenta HOM05D004210 ORTHO05D005017 1.5e-17 95.9 92 58.7
Medtr5g069620 Medicago truncatula HOM05D004210 ORTHO05D005017 1.3e-16 92.8 80 50.0
Nn1g02745 Nelumbo nucifera HOM05D000508 ORTHO05D000371 2.4e-15 88.6 149 37.6
Atru.chr12.1162 Acer truncatum HOM05D004210 ORTHO05D005017 2.3e-13 82.0 82 53.7
Hma1.2p1_0892F.1_g233370 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 1.6e-11 75.9 40 82.5
unitig_26.g9496 Utricularia gibba HOM05D004210 ORTHO05D005017 4.0e-10 71.2 45 66.7
Nn1g04650 Nelumbo nucifera HOM05D004210 ORTHO05D005017 2.0e-09 68.9 40 75.0
HanXRQChr03g0075671 Helianthus annuus HOM05D000030 ORTHO05D000009 5.7e-09 67.4 91 44.0
Lalb_Chr03g0032271 Lupinus albus HOM05D004210 ORTHO05D005017 7.0e-07 60.5 32 81.2
SHI06412 Sapria himalayana HOM05D004210 ORTHO05D000023 9.2e-07 60.1 37 67.6


User provided reference genes

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