Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.0e-108 396.7 204 100.0
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 9.2e-81 303.9 201 76.1
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 7.6e-75 284.3 207 74.4
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 3.3e-62 242.3 204 61.8
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 2.8e-61 239.2 204 63.7
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 1.8e-60 236.5 204 61.8
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 1.8e-60 236.5 204 62.7
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 3.1e-60 235.7 202 63.4
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 2.6e-59 232.6 215 60.9
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 7.6e-59 231.1 204 61.3
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 1.3e-58 230.3 201 62.7
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 3.8e-58 228.8 202 62.4
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 4.9e-58 228.4 203 61.6
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 1.1e-57 227.3 206 62.6
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 1.4e-57 226.9 204 59.8
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 1.9e-57 226.5 205 62.0
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 2.4e-57 226.1 205 60.5
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 3.2e-57 225.7 204 61.3
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 5.5e-57 224.9 204 57.8
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 7.1e-57 224.6 202 60.4
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 7.1e-57 224.6 204 60.8
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 7.1e-57 224.6 205 60.5
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.6e-56 223.4 205 62.0
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.6e-56 223.4 209 62.2
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 2.1e-56 223.0 205 59.5
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 2.1e-56 223.0 204 59.3
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 2.7e-56 222.6 206 60.2
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 3.5e-56 222.2 206 58.3
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 4.6e-56 221.9 209 57.4
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 4.6e-56 221.9 210 60.5
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 6.0e-56 221.5 206 62.1
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 1.0e-55 220.7 204 59.8
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 1.3e-55 220.3 202 59.9
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.8e-55 219.9 205 61.5
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 1.8e-55 219.9 205 61.5
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 2.3e-55 219.5 204 60.3
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 3.0e-55 219.2 204 60.3
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 8.7e-55 217.6 203 59.6
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 8.7e-55 217.6 202 59.9
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.1e-54 217.2 205 61.5
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.1e-54 217.2 207 59.9
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.1e-54 217.2 207 60.9
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 2.5e-54 216.1 204 57.4
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 2.5e-54 216.1 199 62.8
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 2.5e-54 216.1 198 60.1
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 4.3e-54 215.3 207 60.9
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 5.6e-54 214.9 204 56.9
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 5.6e-54 214.9 153 70.6
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 5.6e-54 214.9 209 57.9
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 5.6e-54 214.9 203 60.6
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 5.6e-54 214.9 200 57.5
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 9.6e-54 214.2 203 60.1
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 1.6e-53 213.4 209 56.0
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 3.1e-52 209.1 203 55.7
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 4.0e-52 208.8 192 56.2
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 5.3e-52 208.4 205 56.6
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 6.9e-52 208.0 208 56.2
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 6.9e-52 208.0 208 56.7
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 2.6e-51 206.1 206 58.3
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 4.5e-51 205.3 206 55.8
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 1.3e-50 203.8 205 56.1
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 1.7e-50 203.4 206 56.8
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 2.9e-50 202.6 207 56.0
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 4.9e-50 201.8 203 56.7
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 4.9e-50 201.8 158 67.1
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 6.5e-50 201.4 205 55.6
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 6.5e-50 201.4 204 54.9
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 1.4e-49 200.3 200 55.0
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 3.5e-48 195.7 205 53.7
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 1.3e-47 193.7 194 57.2
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 2.3e-47 193.0 217 53.9
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 5.1e-47 191.8 208 51.9
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 1.1e-46 190.7 194 54.6
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 2.5e-46 189.5 207 51.2
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 2.5e-46 189.5 207 51.2
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 2.5e-46 189.5 207 51.2
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 2.5e-46 189.5 207 51.2
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 4.3e-46 188.7 207 50.7
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 1.6e-45 186.8 204 51.0
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 1.6e-45 186.8 215 50.2
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 2.1e-45 186.4 214 48.6
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 3.7e-45 185.7 207 52.2
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 4.8e-45 185.3 200 54.5
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 6.3e-45 184.9 154 66.2
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.1e-44 184.1 149 61.1
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 1.4e-44 183.7 213 49.3
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 3.1e-44 182.6 163 60.7
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 4.1e-44 182.2 144 66.7
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 6.9e-44 181.4 165 57.6
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 2.2e-42 176.4 200 50.5
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.9e-42 176.0 210 47.6
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 2.5e-41 172.9 200 50.0
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 4.2e-41 172.2 173 54.9
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 9.3e-41 171.0 181 53.6
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 2.1e-40 169.9 173 55.5
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 3.6e-40 169.1 173 54.3
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 6.1e-40 168.3 208 48.6
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 8.7e-39 164.5 214 45.8
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 1.9e-38 163.3 153 53.6
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 2.5e-38 162.9 151 54.3
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 2.2e-37 159.8 150 54.7
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 1.4e-31 140.6 196 39.8
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 8.2e-29 131.3 168 48.2
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 9.4e-25 117.9 92 60.9
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 3.3e-22 109.4 201 36.3
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 5.2e-15 85.5 156 32.7
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 8.8e-15 84.7 115 42.6
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.2e-14 84.3 121 45.5
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 2.0e-14 83.6 118 47.5
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.0e-11 73.6 141 29.1
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 2.7e-11 73.2 140 32.1
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 5.9e-11 72.0 165 30.3
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 6.5e-10 68.6 140 28.6
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 8.5e-10 68.2 70 48.6
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 5.5e-09 65.5 145 30.3
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.6e-08 63.9 140 30.0


User provided reference genes

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