Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 8.7e-232 806.6 404 100.0
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 8.2e-182 640.6 411 76.4
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 2.0e-175 619.4 404 75.0
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 3.5e-156 555.4 393 70.5
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 2.6e-151 539.3 406 62.1
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 9.8e-151 537.3 375 68.0
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 6.4e-150 534.6 375 66.7
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 2.0e-148 529.6 391 63.4
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 6.0e-148 528.1 376 67.6
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 4.3e-146 521.9 371 64.7
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 4.3e-146 521.9 390 66.9
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 7.3e-146 521.2 389 64.0
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 1.6e-145 520.0 381 64.6
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 8.1e-145 517.7 375 63.5
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 2.3e-144 516.2 385 63.9
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 2.3e-144 516.2 382 63.6
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 4.0e-144 515.4 390 63.8
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 1.5e-143 513.5 382 63.4
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 2.0e-143 513.1 375 65.3
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 2.0e-143 513.1 375 63.2
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 7.5e-143 511.1 372 63.7
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 1.3e-142 510.4 376 63.6
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.3e-142 510.4 406 62.6
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 3.7e-142 508.8 375 64.3
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 6.4e-142 508.1 391 62.9
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 8.3e-142 507.7 390 64.4
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 8.3e-142 507.7 406 62.1
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 5.4e-141 505.0 370 64.3
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 7.1e-141 504.6 388 61.6
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 7.1e-141 504.6 383 61.9
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 9.2e-141 504.2 380 62.6
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 1.2e-140 503.8 374 64.2
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 1.0e-139 500.7 378 63.0
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 5.1e-139 498.4 399 60.9
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 1.1e-138 497.3 379 63.1
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 1.5e-138 496.9 370 63.2
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 3.6e-137 492.3 370 63.2
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 3.6e-137 492.3 403 60.0
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.1e-136 490.7 403 60.0
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 1.4e-136 490.3 375 61.3
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 1.4e-136 490.3 395 60.3
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.4e-136 489.6 410 58.0
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 2.4e-136 489.6 385 60.3
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 8.9e-136 487.6 383 60.6
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 1.5e-135 486.9 375 61.1
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 1.5e-135 486.9 412 60.0
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 2.0e-135 486.5 375 61.1
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 2.0e-135 486.5 380 61.6
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.9e-134 482.6 409 58.4
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 3.8e-134 482.3 380 60.8
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 1.4e-133 480.3 380 60.8
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 6.0e-132 474.9 396 57.6
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 3.0e-131 472.6 372 60.5
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 8.6e-131 471.1 383 60.3
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 8.6e-131 471.1 369 61.5
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 1.9e-130 469.9 383 60.1
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 2.8e-129 466.1 376 60.1
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 4.7e-129 465.3 381 59.3
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 5.2e-128 461.8 377 59.2
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 1.2e-127 460.7 383 58.5
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 2.0e-127 459.9 374 59.4
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 3.4e-127 459.1 381 59.6
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 4.9e-126 455.3 372 61.0
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 5.4e-125 451.8 374 59.1
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 1.2e-124 450.7 381 55.6
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 1.6e-124 450.3 335 61.5
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 2.1e-124 449.9 428 53.7
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 4.6e-124 448.7 381 58.8
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 1.3e-121 440.7 380 58.2
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.1e-120 437.6 380 57.9
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.1e-120 437.6 380 57.9
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.4e-120 437.2 380 58.2
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 2.4e-120 436.4 377 59.9
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 9.0e-120 434.5 386 57.5
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 7.6e-119 431.4 372 55.1
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 1.4e-117 427.2 444 51.1
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 9.3e-117 424.5 417 52.8
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.0e-115 419.5 395 53.4
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 4.3e-114 415.6 298 63.1
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 9.9e-111 404.4 401 52.9
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 6.4e-110 401.7 377 54.4
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 7.9e-108 394.8 298 61.7
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.8e-107 393.7 296 60.1
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 1.1e-106 391.0 286 61.9
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 7.4e-106 388.3 289 61.2
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 1.9e-101 373.6 297 57.9
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 8.2e-89 331.6 298 51.3
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 3.8e-86 322.8 251 63.3
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 1.1e-82 311.2 245 58.4
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 1.3e-81 307.8 254 58.3
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 1.0e-75 288.1 270 54.8
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 2.0e-74 283.9 387 42.9
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.7e-73 280.8 249 57.4
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 2.8e-73 280.0 223 61.4
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 2.3e-67 260.4 383 38.1
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 1.5e-66 257.7 213 57.7
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 7.7e-55 218.8 201 52.2
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 9.8e-50 201.8 158 60.1
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 1.8e-48 197.6 163 60.1
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 1.2e-39 168.3 390 30.5
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.0e-38 162.9 160 50.0
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 8.6e-38 162.2 149 55.7
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.2e-34 151.8 137 53.3
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.9e-24 117.9 101 62.4
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 2.1e-23 114.4 378 26.2
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 3.5e-23 113.6 78 67.9
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 7.3e-21 105.9 80 63.8
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 9.9e-18 95.5 109 45.0
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 2.4e-16 90.9 373 24.7
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 5.4e-16 89.7 74 58.1
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 1.6e-15 88.2 78 52.6
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 2.1e-15 87.8 415 26.3
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 1.0e-14 85.5 374 23.8
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 3.6e-12 77.0 109 35.8
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 2.0e-10 71.2 68 44.1
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 9.9e-10 68.9 64 42.2
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 1.3e-09 68.6 41 82.9
SEGI_39013 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 6.0e-07 59.7 147 25.9


User provided reference genes

Program Settings