Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 9.4e-130 466.8 234 100.0
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 6.8e-104 380.9 213 90.6
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 1.0e-99 367.1 245 80.8
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 1.1e-93 347.1 228 75.9
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 1.4e-93 346.7 234 74.4
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 7.1e-93 344.4 237 71.7
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 7.1e-93 344.4 197 83.8
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 1.6e-92 343.2 215 77.2
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 3.5e-92 342.0 199 82.9
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 6.0e-92 341.3 212 78.3
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.0e-91 340.5 242 71.5
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 1.3e-91 340.1 237 74.3
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 1.7e-91 339.7 248 71.0
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 2.3e-91 339.3 242 69.8
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 2.3e-91 339.3 233 72.5
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 3.9e-91 338.6 235 71.9
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 3.9e-91 338.6 235 71.9
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 8.6e-91 337.4 199 80.9
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 1.6e-89 333.2 205 77.1
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 6.2e-89 331.3 199 80.9
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 8.1e-89 330.9 208 75.0
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 2.4e-88 329.3 199 80.4
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 3.1e-88 328.9 231 70.1
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 3.1e-88 328.9 210 76.2
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 4.0e-88 328.6 222 73.9
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 4.0e-88 328.6 211 74.4
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 5.2e-88 328.2 242 69.4
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 1.2e-87 327.0 229 69.9
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 1.5e-87 326.6 212 73.6
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.0e-87 326.2 241 69.7
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 2.6e-87 325.9 200 77.5
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 3.4e-87 325.5 206 75.7
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 3.4e-87 325.5 198 77.3
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 7.6e-87 324.3 211 73.5
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 7.6e-87 324.3 210 74.8
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 7.6e-87 324.3 198 77.3
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 7.6e-87 324.3 236 68.6
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 1.3e-86 323.6 210 74.8
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 1.7e-86 323.2 217 71.9
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 1.7e-86 323.2 260 63.1
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 1.7e-86 323.2 220 72.7
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 1.7e-86 323.2 198 79.3
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 1.7e-86 323.2 217 71.9
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.9e-86 322.4 197 78.7
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 3.8e-86 322.0 243 69.1
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 3.8e-86 322.0 217 71.4
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 6.4e-86 321.2 211 72.0
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 8.4e-86 320.9 204 76.5
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 1.9e-85 319.7 232 70.7
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 2.4e-85 319.3 209 72.7
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 3.2e-85 318.9 202 77.2
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 7.1e-85 317.8 198 75.8
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 9.3e-85 317.4 197 78.2
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 1.2e-84 317.0 210 73.3
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 1.2e-84 317.0 198 76.8
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 1.6e-84 316.6 209 75.1
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 2.1e-84 316.2 229 71.6
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 2.1e-84 316.2 212 72.2
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 2.7e-84 315.8 231 68.4
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 4.6e-84 315.1 213 72.3
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.0e-83 313.9 194 76.3
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 2.5e-82 309.3 211 72.5
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 4.3e-82 308.5 196 74.5
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 9.6e-82 307.4 206 73.8
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 1.6e-81 306.6 208 71.6
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 2.8e-81 305.8 212 71.7
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 2.8e-81 305.8 212 71.7
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 3.6e-81 305.4 238 64.3
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 6.2e-81 304.7 202 72.8
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 8.1e-81 304.3 198 72.2
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 8.1e-81 304.3 201 73.1
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 1.1e-80 303.9 223 67.3
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 1.1e-80 303.9 213 69.0
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 1.4e-80 303.5 212 71.2
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 3.1e-80 302.4 212 70.8
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 5.3e-80 301.6 212 70.8
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 6.9e-80 301.2 213 69.5
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 9.0e-80 300.8 247 64.8
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 4.5e-79 298.5 244 64.3
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 1.3e-78 297.0 205 70.2
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 1.7e-78 296.6 218 68.3
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 3.2e-77 292.4 199 73.4
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 3.2e-77 292.4 210 68.6
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 7.9e-76 287.7 204 69.1
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.9e-74 283.1 183 75.4
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 7.4e-74 281.2 195 68.7
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 1.1e-72 277.3 181 74.6
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 6.9e-72 274.6 191 69.1
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 7.6e-71 271.2 194 66.0
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 1.9e-69 266.5 232 58.2
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.7e-60 236.1 147 79.6
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 1.1e-58 230.7 191 56.0
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 1.1e-56 224.2 129 86.0
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 1.3e-54 217.2 161 70.2
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 2.5e-53 213.0 231 51.5
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.5e-50 203.0 231 50.6
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.1e-48 196.1 159 61.6
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 2.6e-47 193.0 134 70.9
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 2.5e-45 186.4 198 48.0
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 8.8e-43 177.9 236 44.9
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.6e-42 176.4 131 65.6
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 5.7e-42 175.3 168 51.8
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 1.5e-39 167.2 193 44.6
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 9.4e-37 157.9 126 66.7
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.8e-35 153.7 94 79.8
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 2.3e-35 153.3 97 73.2
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 9.7e-34 147.9 98 70.4
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.8e-33 146.4 112 64.3
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 7.0e-32 141.7 137 53.3
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 7.7e-31 138.3 205 40.0
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 2.9e-30 136.3 187 41.2
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 2.9e-30 136.3 122 54.9
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 1.2e-28 131.0 96 69.8
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 2.7e-28 129.8 135 52.6
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 3.2e-21 106.3 71 66.2
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 1.7e-17 94.0 49 91.8
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 2.4e-16 90.1 52 75.0
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 4.1e-16 89.4 95 53.7
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 3.6e-12 76.3 64 56.2
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 3.4e-10 69.7 55 50.9
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 9.8e-10 68.2 51 54.9
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 2.8e-09 66.6 51 52.9
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 8.3e-09 65.1 68 51.5
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 5.9e-07 58.9 43 72.1
SMO361G0405 Selaginella moellendorffii HOM05D014757 ORTHO05D018111 1.3e-06 57.8 78 44.9
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 2.3e-06 57.0 41 70.7
SMO361G0419 Selaginella moellendorffii HOM05D014757 ORTHO05D018111 5.0e-06 55.8 78 42.3


User provided reference genes

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