Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0442391 Helianthus annuus HOM05D001343 ORTHO05D007223 0.0e+00 1151.3 789 100.0
ECA238G2213 Erigeron canadensis HOM05D001343 ORTHO05D007223 5.6e-259 897.9 804 78.2
Lsat_1_v5_gn_2_74420 Lactuca sativa HOM05D001343 ORTHO05D007223 3.2e-206 722.6 801 68.9
Dinv08526 Davidia involucrata HOM05D001343 ORTHO05D007223 8.2e-202 708.0 803 62.3
Actinidia17384 Actinidia chinensis HOM05D001343 ORTHO05D007223 3.0e-188 662.9 802 60.0
Hma1.2p1_0300F.1_g118160 Hydrangea macrophylla HOM05D001343 ORTHO05D007223 1.4e-180 637.5 808 57.9
Dinv40173 Davidia involucrata HOM05D001343 ORTHO05D007223 1.3e-178 630.9 516 70.5
GSVIVG01003839001 Vitis vinifera HOM05D001343 ORTHO05D007223 4.8e-178 629.0 742 63.3
CANSAT25G0854 Cannabis sativa HOM05D001343 ORTHO05D007223 1.6e-176 624.0 743 64.5
CANSAT25G1453 Cannabis sativa HOM05D001343 ORTHO05D007223 5.9e-176 622.1 743 64.2
TAR381G1734 Trochodendron aralioides HOM05D001343 ORTHO05D007223 7.7e-176 621.7 803 61.8
Duzib187G0329 Durio zibethinus HOM05D001343 ORTHO05D007223 2.9e-175 619.8 802 60.2
Duzib147G0638 Durio zibethinus HOM05D001343 ORTHO05D007223 3.3e-174 616.3 798 61.9
CsaV3_3G000380 Cucumis sativus L. HOM05D001343 ORTHO05D007223 1.2e-173 614.4 808 61.6
Sed0023593 Sechium edule HOM05D001343 ORTHO05D007223 1.8e-172 610.5 801 60.9
Atru.chr3.956 Acer truncatum HOM05D001343 ORTHO05D007223 2.3e-172 610.1 768 57.3
TWI09G1271 Tripterygium wilfordii HOM05D001343 ORTHO05D007223 1.5e-171 607.4 797 60.1
QL06p052741 Quercus lobata HOM05D001343 ORTHO05D007223 7.5e-171 605.1 822 56.9
ClCG10G000340 Citrullus lanatus HOM05D001343 ORTHO05D007223 6.3e-170 602.1 809 61.7
Prupe.7G179600 Prunus persica HOM05D001343 ORTHO05D007223 3.1e-169 599.7 749 62.3
Lalb_Chr05g0211921 Lupinus albus HOM05D001343 ORTHO05D007223 4.1e-169 599.4 807 59.5
CiPaw.07G004100 Carya illinoinensis HOM05D001343 ORTHO05D007223 9.2e-169 598.2 803 59.2
Aqoxy5G01035 Aquilegia oxysepala HOM05D001343 ORTHO05D007223 1.2e-168 597.8 802 56.6
MD15G1233300 Malus domestica HOM05D001343 ORTHO05D007223 1.9e-166 590.5 788 55.2
SGA_v2.0_scaffold12G05990 Striga asiatica HOM05D001343 ORTHO05D007223 1.9e-166 590.5 799 56.9
PSO210G1702 Papaver somniferum HOM05D001343 ORTHO05D007223 4.7e-165 585.9 748 59.2
Potri.005G099800 Populus trichocarpa HOM05D001343 ORTHO05D007223 4.7e-165 585.9 752 61.4
Sabra05G0082500 Salix brachista HOM05D001343 ORTHO05D007223 8.0e-165 585.1 791 59.7
Hund03615 Selenicereus undatus HOM05D001343 ORTHO05D007223 2.3e-164 583.6 794 58.8
Haze_03675 Corylus avellana HOM05D001343 ORTHO05D007223 1.2e-163 581.3 816 58.2
vmacro20524 Vaccinium macrocarpon HOM05D001343 ORTHO05D007223 2.2e-162 577.0 755 62.4
PSO170G3735 Papaver somniferum HOM05D001343 ORTHO05D007223 1.2e-160 571.2 804 58.8
Gohir.A10G099100 Gossypium hirsutum HOM05D001343 ORTHO05D007223 1.0e-159 568.2 801 59.9
Thecc.01G007100 Theobroma cacao HOM05D001343 ORTHO05D007223 3.4e-155 553.1 799 59.6
Peaxi162Scf01446g00025 Petunia axillaris HOM05D001343 ORTHO05D007223 3.7e-154 549.7 810 52.8
Nitab4.5_0000702g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 1.9e-153 547.4 798 54.1
TPR.G25095 Trifolium pratense HOM05D001343 ORTHO05D007223 1.6e-152 544.3 812 58.0
QL06p053829 Quercus lobata HOM05D001343 ORTHO05D007223 4.6e-152 542.7 788 57.9
Gorai.011G097900 Gossypium raimondii HOM05D001343 ORTHO05D007223 4.3e-150 536.2 801 58.4
AT5G66030 Arabidopsis thaliana HOM05D001343 ORTHO05D007223 1.2e-149 534.6 794 55.7
Gohir.D10G089000 Gossypium hirsutum HOM05D001343 ORTHO05D007223 1.2e-149 534.6 801 58.3
THA.LOC104826465 Tarenaya hassleriana HOM05D001343 ORTHO05D007223 3.6e-149 533.1 784 57.5
Manes.02G112700 Manihot esculenta HOM05D001343 ORTHO05D007223 1.1e-148 531.6 804 58.2
CSS0043948 Camellia sinensis var. sinensis HOM05D001343 ORTHO05D007223 6.8e-148 528.9 791 57.4
BcaB04g20130 Brassica carinata HOM05D001343 ORTHO05D002008 1.5e-147 527.7 771 56.4
MSTRG.15594 Avicennia marina HOM05D001343 ORTHO05D007223 5.8e-147 525.8 796 54.0
MD02G1119300 Malus domestica HOM05D001343 ORTHO05D007223 9.9e-147 525.0 788 52.9
EL10Ac6g15468 Beta vulgaris HOM05D001343 ORTHO05D007223 1.7e-146 524.2 809 55.0
FvH4_1g10521 Fragaria vesca HOM05D001343 ORTHO05D007223 1.7e-146 524.2 764 57.6
FAN23G1852 Fragaria x ananassa HOM05D001343 ORTHO05D007223 4.1e-145 519.6 789 54.2
Phvul.002G114800 Phaseolus vulgaris HOM05D001343 ORTHO05D007223 7.1e-145 518.8 797 49.1
Actinidia22910 Actinidia chinensis HOM05D001343 ORTHO05D007223 9.2e-145 518.5 800 55.8
MELO3C013733.2 Cucumis melo HOM05D001343 ORTHO05D007223 1.2e-144 518.1 807 56.5
Cpa.g.sc55.186 Carica papaya HOM05D001343 ORTHO05D007223 1.6e-144 517.7 798 56.1
FAN19G1061 Fragaria x ananassa HOM05D001343 ORTHO05D007223 2.1e-144 517.3 764 56.9
COL.COLO4_22537 Corchorus olitorius HOM05D001343 ORTHO05D007223 6.0e-144 515.8 799 53.8
Thhalv10003686m.g Eutrema salsugineum HOM05D001343 ORTHO05D007223 1.7e-143 514.2 787 55.3
FAN28G2189 Fragaria x ananassa HOM05D001343 ORTHO05D007223 5.1e-143 512.7 789 55.5
ATR0661G538 Amborella trichopoda HOM05D001343 ORTHO05D007223 6.2e-141 505.8 752 54.1
Ciclev10024922m.g Citrus clementina HOM05D001343 ORTHO05D007223 9.9e-139 498.4 799 50.7
Atru.chr3.968 Acer truncatum HOM05D001343 ORTHO05D007223 6.4e-138 495.7 769 51.1
C09p12110 Brassica napus HOM05D001343 ORTHO05D002008 8.4e-138 495.4 756 56.1
CAN.G890.76 Capsicum annuum HOM05D001343 ORTHO05D007223 1.1e-137 495.0 796 49.9
A09p10220 Brassica napus HOM05D001343 ORTHO05D002008 2.4e-137 493.8 753 55.9
BcaC04g23105 Brassica carinata HOM05D001343 ORTHO05D002008 5.4e-137 492.7 751 56.3
AL8G45590 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 7.1e-137 492.3 808 53.8
SalBow5G5069 Salvia bowleyana HOM05D001343 ORTHO05D007223 7.1e-137 492.3 856 51.6
BolC9t54101H Brassica oleracea HOM05D001343 ORTHO05D002008 1.6e-136 491.1 758 55.1
Nitab4.5_0002967g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 2.1e-136 490.7 797 54.8
BraA09t36667Z Brassica rapa HOM05D001343 ORTHO05D002008 2.7e-136 490.3 762 55.5
PGR083G0487 Punica granatum HOM05D001343 ORTHO05D007223 2.7e-136 490.3 757 52.3
Cc07_g11650 Coffea canephora HOM05D001343 ORTHO05D007223 4.6e-136 489.6 759 61.7
arahy.Tifrunner.gnm1.ann1.AU9Y8G Arachis hypogaea HOM05D001343 ORTHO05D007223 1.3e-135 488.0 815 54.8
arahy.Tifrunner.gnm1.ann1.SLQH96 Arachis hypogaea HOM05D001343 ORTHO05D007223 1.3e-135 488.0 815 54.8
Glyma.01G159900 Glycine max HOM05D001343 ORTHO05D007223 3.9e-135 486.5 797 52.2
Lj2g0004784 Lotus japonicus HOM05D001343 ORTHO05D007223 1.9e-134 484.2 810 53.1
Carub.0008s2848 Capsella rubella HOM05D001343 ORTHO05D007223 3.6e-133 479.9 789 49.3
Migut.L00734 Erythranthe guttata HOM05D001343 ORTHO05D007223 7.6e-131 472.2 804 53.5
Sp2g30660 Schrenkiella parvula HOM05D001343 ORTHO05D007223 2.9e-130 470.3 782 53.3
Nn5g30956 Nelumbo nucifera HOM05D001343 ORTHO05D007223 5.4e-129 466.1 766 50.4
Ah.03g148390 Amaranthus hybridus HOM05D001343 ORTHO05D007223 1.0e-127 461.8 800 51.5
AUR62003379 Chenopodium quinoa HOM05D001343 ORTHO05D007223 1.3e-127 461.5 793 51.3
Medtr5g023770 Medicago truncatula HOM05D001343 ORTHO05D007223 3.0e-127 460.3 779 53.4
Sc16g0001690 Simmondsia chinensis HOM05D001343 ORTHO05D007223 3.9e-127 459.9 790 52.4
Os07g0472500 Oryza sativa ssp. japonica HOM05D001343 ORTHO05D007223 5.1e-127 459.5 745 54.1
Sopen02g027640 Solanum pennellii HOM05D001343 ORTHO05D007223 8.1e-125 452.2 797 50.1
AUR62029449 Chenopodium quinoa HOM05D001343 ORTHO05D007223 1.7e-122 444.5 792 49.6
Solyc02g082840.3 Solanum lycopersicum HOM05D001343 ORTHO05D007223 2.2e-122 444.1 797 49.4
Zm00001eb104860 Zea mays HOM05D001343 ORTHO05D007223 2.3e-119 434.1 745 45.5
Lj4A232G45 Lonicera japonica HOM05D001343 ORTHO05D007223 7.4e-118 429.1 772 52.5
Manes.01G153700 Manihot esculenta HOM05D001343 ORTHO05D007223 2.4e-116 424.1 502 53.6
Glyma.11G084200 Glycine max HOM05D001343 ORTHO05D007223 6.9e-116 422.5 799 49.9
Eucgr.J02528 Eucalyptus grandis HOM05D001343 ORTHO05D007223 1.3e-114 418.3 787 50.4
unitig_88.g27773 Utricularia gibba HOM05D001343 ORTHO05D007223 1.9e-113 414.5 501 51.5
Ca_24963_v3 Cicer arietinum L. HOM05D001343 ORTHO05D007223 2.5e-113 414.1 830 49.4
VMungo1215G1031 Vigna mungo HOM05D001343 ORTHO05D007223 2.1e-109 401.0 809 46.5
CARHR281730 Cardamine hirsuta HOM05D001343 ORTHO05D007223 5.7e-102 376.3 421 55.1
DCAR_011583 Daucus carota HOM05D001343 ORTHO05D007223 2.7e-96 357.5 782 47.8
Mapoly0179s0009 Marchantia polymorpha HOM05D001343 ORTHO05D007223 6.5e-90 336.3 552 42.4
HPP92_003502 Vanilla planifolia HOM05D001343 ORTHO05D007223 1.4e-89 335.1 759 41.6
AagrBONN_evm.TU.Sc2ySwM_344.163 Anthoceros agrestis HOM05D001343 ORTHO05D007223 1.7e-85 321.6 549 42.6
SEGI_12448 Sequoiadendron giganteum HOM05D001343 ORTHO05D007223 5.2e-79 300.1 758 39.4
Pp3c20_18210 Physcomitrium patens HOM05D001343 ORTHO05D007223 1.2e-70 272.3 515 40.6
CDE06G1375 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 1.4e-68 265.4 278 55.4
CDE07G1064 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 4.2e-65 253.8 261 56.3
RcHm_v2.0_Chr2g0097461 Rosa chinensis HOM05D001343 ORTHO05D007223 8.0e-64 249.6 546 54.2
Pp3c23_9770 Physcomitrium patens HOM05D001343 ORTHO05D007223 7.5e-62 243.0 514 38.7
RcHm_v2.0_Chr2g0097581 Rosa chinensis HOM05D001343 ORTHO05D007223 2.4e-60 238.0 546 53.3
Actinidia26548 Actinidia chinensis HOM05D001343 ORTHO05D007223 5.9e-59 233.4 210 65.2
RcHm_v2.0_Chr2g0097451 Rosa chinensis HOM05D001343 ORTHO05D007223 3.3e-57 227.6 190 69.5
Psat2g150480 Pisum sativum HOM05D001343 ORTHO05D007223 1.4e-55 222.2 197 66.5
Migut.L00811 Erythranthe guttata HOM05D001343 ORTHO05D007223 3.1e-47 194.5 133 80.5
CDE07G1287 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 1.5e-46 192.2 244 48.8
Psat2g150520 Pisum sativum HOM05D001343 ORTHO05D007223 3.7e-45 187.6 507 49.7
Rhsim10G0198000 Rhododendron simsii HOM05D001343 ORTHO05D007223 1.0e-42 179.5 212 55.7
CBR_g34809 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-39 168.7 351 38.5
QL06p053793 Quercus lobata HOM05D001343 ORTHO05D007223 5.2e-39 167.2 138 73.9
Migut.L00927 Erythranthe guttata HOM05D001343 ORTHO05D007223 1.3e-34 152.5 376 57.7
RcHm_v2.0_Chr2g0097571 Rosa chinensis HOM05D001343 ORTHO05D007223 7.3e-33 146.7 123 72.4
arahy.Tifrunner.gnm1.ann1.ISY8LN Arachis hypogaea HOM05D001343 ORTHO05D007223 9.2e-28 129.8 166 51.8
arahy.Tifrunner.gnm1.ann1.9PSP05 Arachis hypogaea HOM05D001343 ORTHO05D007223 2.3e-26 125.2 165 52.1
arahy.Tifrunner.gnm1.ann1.6P6C0I Arachis hypogaea HOM05D001343 ORTHO05D007223 1.6e-19 102.4 95 69.5
Oeu032010.1 Olea europaea HOM05D001343 ORTHO05D007223 4.3e-17 94.4 138 46.4
HPP92_003508 Vanilla planifolia HOM05D001343 ORTHO05D007223 1.3e-16 92.8 56 89.3
arahy.Tifrunner.gnm1.ann1.T78FCF Arachis hypogaea HOM05D001343 ORTHO05D007223 1.4e-15 89.4 78 66.7
RcHm_v2.0_Chr6g0253501 Rosa chinensis HOM05D001343 ORTHO05D007223 1.2e-14 86.3 101 52.5
Aa31LG1G14520 Aethionema arabicum HOM05D001343 ORTHO05D007223 3.4e-14 84.7 156 43.6
Cpa.g.sc1414.4 Carica papaya HOM05D001343 ORTHO05D007223 4.4e-14 84.3 104 53.8
AL472U10010 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 1.4e-12 79.3 147 38.8
QL06p052753 Quercus lobata HOM05D003687 ORTHO05D007223 1.4e-12 79.3 55 76.4
ECA238G3708 Erigeron canadensis HOM05D012425 ORTHO05D014354 2.3e-10 72.0 147 40.1
arahy.Tifrunner.gnm1.ann1.QS1PDB Arachis hypogaea HOM05D001343 ORTHO05D007223 2.5e-09 68.6 71 49.3
Lsat_1_v5_gn_4_84780 Lactuca sativa HOM05D003172 ORTHO05D007223 5.6e-09 67.4 48 81.2
Cre09.g398808 Chlamydomonas reinhardtii HOM05D001343 ORTHO05D007223 2.8e-08 65.1 96 41.7
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 3.1e-07 61.6 160 36.2
CDE06G1191 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 9.9e-06 56.6 93 38.7
RcHm_v2.0_Chr2g0097561 Rosa chinensis HOM05D001343 ORTHO05D007223 9.9e-06 56.6 47 57.4


User provided reference genes

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