Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0441881 Helianthus annuus HOM05D004032 ORTHO05D004462 4.2e-78 294.7 154 100.0
Lsat_1_v5_gn_2_83781 Lactuca sativa HOM05D004032 ORTHO05D004462 3.9e-39 165.2 163 62.0
ECA238G1032 Erigeron canadensis HOM05D004032 ORTHO05D004462 3.5e-32 142.1 168 56.0
QL06p039858 Quercus lobata HOM05D004032 ORTHO05D004462 8.1e-21 104.4 144 51.4
Actinidia16438 Actinidia chinensis HOM05D004032 ORTHO05D004462 4.0e-20 102.1 159 42.8
HanXRQChr12g0373191 Helianthus annuus HOM05D004032 ORTHO05D004462 3.4e-19 99.0 169 45.6
Haze_15306 Corylus avellana HOM05D004032 ORTHO05D004462 3.8e-18 95.5 140 45.0
Actinidia21232 Actinidia chinensis HOM05D004032 ORTHO05D004462 1.9e-17 93.2 139 45.3
Ciclev10026503m.g Citrus clementina HOM05D004032 ORTHO05D004462 1.9e-17 93.2 151 45.0
Prupe.6G223500 Prunus persica HOM05D004032 ORTHO05D004462 1.9e-17 93.2 154 45.5
FAN28G1831 Fragaria x ananassa HOM05D004032 ORTHO05D004462 2.7e-16 89.4 166 39.8
Lsat_1_v5_gn_4_162340 Lactuca sativa HOM05D004032 ORTHO05D004462 3.5e-16 89.0 169 41.4
Glyma.17G163400 Glycine max HOM05D004032 ORTHO05D004462 7.9e-16 87.8 138 41.3
RcHm_v2.0_Chr2g0107481 Rosa chinensis HOM05D004032 ORTHO05D004462 7.9e-16 87.8 168 40.5
Lj4g0009335 Lotus japonicus HOM05D004032 ORTHO05D004462 1.7e-15 86.7 177 39.5
CiPaw.02G004200 Carya illinoinensis HOM05D004032 ORTHO05D004462 2.3e-15 86.3 152 41.4
Phvul.003G236700 Phaseolus vulgaris HOM05D004032 ORTHO05D004462 3.0e-15 85.9 144 42.4
Glyma.05G103900 Glycine max HOM05D004032 ORTHO05D004462 3.9e-15 85.5 142 40.8
VMungo0251G2494 Vigna mungo HOM05D004032 ORTHO05D004462 3.9e-15 85.5 144 40.3
TWI53G0135 Tripterygium wilfordii HOM05D004032 ORTHO05D004462 6.6e-15 84.7 154 42.9
HanXRQChr11g0322451 Helianthus annuus HOM05D004032 ORTHO05D004462 8.7e-15 84.3 172 38.4
Glyma.01G192400 Glycine max HOM05D004032 ORTHO05D004462 1.1e-14 84.0 152 41.4
Psat4g083520 Pisum sativum HOM05D004032 ORTHO05D004462 1.9e-14 83.2 140 40.7
Thecc.01G069300 Theobroma cacao HOM05D004032 ORTHO05D004462 1.9e-14 83.2 137 43.1
Phvul.002G012400 Phaseolus vulgaris HOM05D004032 ORTHO05D004462 2.5e-14 82.8 155 41.9
COL.COLO4_11544 Corchorus olitorius HOM05D004032 ORTHO05D004462 3.3e-14 82.4 169 38.5
Gohir.A11G216800 Gossypium hirsutum HOM05D004032 ORTHO05D004462 4.3e-14 82.0 142 43.0
Glyma.11G049700 Glycine max HOM05D004032 ORTHO05D004462 5.6e-14 81.6 152 42.1
Dinv30069 Davidia involucrata HOM05D004032 ORTHO05D004462 7.3e-14 81.3 130 49.2
Gohir.D11G206500 Gossypium hirsutum HOM05D004032 ORTHO05D004462 7.3e-14 81.3 145 44.1
Gorai.007G221700 Gossypium raimondii HOM05D004032 ORTHO05D004462 7.3e-14 81.3 145 44.1
TWI09G0556 Tripterygium wilfordii HOM05D004032 ORTHO05D004462 7.3e-14 81.3 170 37.6
Duzib147G1493 Durio zibethinus HOM05D004032 ORTHO05D004462 9.6e-14 80.9 137 43.8
GSVIVG01000145001 Vitis vinifera HOM05D004032 ORTHO05D004462 9.6e-14 80.9 159 40.3
Duzib187G1312 Durio zibethinus HOM05D004032 ORTHO05D004462 1.3e-13 80.5 145 44.1
Potri.005G145800 Populus trichocarpa HOM05D004032 ORTHO05D004462 1.3e-13 80.5 142 40.8
Aqoxy6G02719 Aquilegia oxysepala HOM05D004032 ORTHO05D004462 2.1e-13 79.7 147 40.8
DCAR_025783 Daucus carota HOM05D004032 ORTHO05D004462 2.1e-13 79.7 138 40.6
Gohir.A10G090100 Gossypium hirsutum HOM05D004032 ORTHO05D004462 2.1e-13 79.7 158 39.9
FvH4_1g17290 Fragaria vesca HOM05D004032 ORTHO05D004462 2.8e-13 79.3 166 38.6
FAN19G2997 Fragaria x ananassa HOM05D004032 ORTHO05D004462 2.8e-13 79.3 166 38.6
Medtr4g095440 Medicago truncatula HOM05D004032 ORTHO05D004462 3.6e-13 79.0 155 36.8
TAR376G0432 Trochodendron aralioides HOM05D004032 ORTHO05D004462 3.6e-13 79.0 130 46.9
CSS0002661 Camellia sinensis var. sinensis HOM05D004032 ORTHO05D004462 4.8e-13 78.6 143 46.2
CSS0031607 Camellia sinensis var. sinensis HOM05D004032 ORTHO05D004462 4.8e-13 78.6 143 46.2
TPR.G23878 Trifolium pratense HOM05D004032 ORTHO05D004462 4.8e-13 78.6 181 35.9
ClCG01G017390 Citrullus lanatus HOM05D004032 ORTHO05D004462 8.1e-13 77.8 185 32.4
VMungo1215G3265 Vigna mungo HOM05D004032 ORTHO05D004462 8.1e-13 77.8 150 40.0
Gorai.011G107600 Gossypium raimondii HOM05D004032 ORTHO05D004462 1.1e-12 77.4 159 40.3
BcaB04g20056 Brassica carinata HOM05D004032 ORTHO05D004462 1.4e-12 77.0 157 42.7
Lalb_Chr16g0389141 Lupinus albus HOM05D004032 ORTHO05D004462 1.4e-12 77.0 152 40.1
Gohir.D10G098000 Gossypium hirsutum HOM05D004032 ORTHO05D004462 3.1e-12 75.9 157 41.4
Sed0022630 Sechium edule HOM05D004032 ORTHO05D004462 3.1e-12 75.9 161 35.4
Cc07_g06860 Coffea canephora HOM05D004032 ORTHO05D004462 4.0e-12 75.5 141 39.0
Manes.13G113400 Manihot esculenta HOM05D004032 ORTHO05D004462 4.0e-12 75.5 160 38.8
Potri.007G053300 Populus trichocarpa HOM05D004032 ORTHO05D004462 4.0e-12 75.5 142 39.4
Dinv26906 Davidia involucrata HOM05D004032 ORTHO05D004462 6.9e-12 74.7 175 37.7
CiPaw.01G006700 Carya illinoinensis HOM05D004032 ORTHO05D004462 1.2e-11 73.9 147 41.5
CsaV3_6G043920 Cucumis sativus L. HOM05D004032 ORTHO05D004462 1.2e-11 73.9 140 37.9
Eucgr.I00716 Eucalyptus grandis HOM05D004032 ORTHO05D004462 1.2e-11 73.9 137 39.4
DCAR_010831 Daucus carota HOM05D004032 ORTHO05D004462 1.5e-11 73.6 147 40.1
vmacro05391 Vaccinium macrocarpon HOM05D004032 ORTHO05D004462 1.5e-11 73.6 164 34.8
MD02G1182600 Malus domestica HOM05D004032 ORTHO05D004462 2.0e-11 73.2 111 45.9
BcaC03g18375 Brassica carinata HOM05D004032 ORTHO05D004462 2.6e-11 72.8 168 38.1
C02p64510 Brassica napus HOM05D004032 ORTHO05D004462 2.6e-11 72.8 168 38.1
BolC2t12515H Brassica oleracea HOM05D004032 ORTHO05D004462 2.6e-11 72.8 168 38.1
CARHR280210 Cardamine hirsuta HOM05D004032 ORTHO05D004462 2.6e-11 72.8 94 47.9
A02p44240 Brassica napus HOM05D004032 ORTHO05D004462 3.4e-11 72.4 168 37.5
BraA02t09348Z Brassica rapa HOM05D004032 ORTHO05D004462 3.4e-11 72.4 168 37.5
Sabra05G0116500 Salix brachista HOM05D004032 ORTHO05D004462 4.5e-11 72.0 138 38.4
MD15G1293900 Malus domestica HOM05D004032 ORTHO05D004462 5.8e-11 71.6 112 43.8
MSTRG.2833 Avicennia marina HOM05D004032 ORTHO05D004462 7.6e-11 71.2 161 39.1
ECA232G3054 Erigeron canadensis HOM05D004032 ORTHO05D004462 7.6e-11 71.2 156 37.2
Manes.12G111200 Manihot esculenta HOM05D004032 ORTHO05D004462 7.6e-11 71.2 145 40.0
C09p10940 Brassica napus HOM05D004032 ORTHO05D004462 9.9e-11 70.9 166 38.0
MSTRG.23688 Avicennia marina HOM05D004032 ORTHO05D004462 1.3e-10 70.5 128 43.8
Sp2g29270 Schrenkiella parvula HOM05D004032 ORTHO05D004462 1.3e-10 70.5 94 47.9
TWI73G0275 Tripterygium wilfordii HOM05D004032 ORTHO05D004462 2.2e-10 69.7 152 41.4
HPP92_023674 Vanilla planifolia HOM05D004032 ORTHO05D004462 2.2e-10 69.7 179 33.5
HPP92_023691 Vanilla planifolia HOM05D004032 ORTHO05D004462 2.2e-10 69.7 179 33.5
Hma1.2p1_0017F.1_g012150 Hydrangea macrophylla HOM05D004032 ORTHO05D004462 2.9e-10 69.3 119 41.2
Sed0024584 Sechium edule HOM05D004032 ORTHO05D004462 3.8e-10 68.9 126 41.3
Actinidia36441 Actinidia chinensis HOM05D004032 ORTHO05D004462 4.9e-10 68.6 97 47.4
AT5G67390 Arabidopsis thaliana HOM05D004032 ORTHO05D004462 4.9e-10 68.6 95 48.4
BcaC04g23221 Brassica carinata HOM05D004032 ORTHO05D004462 4.9e-10 68.6 168 37.5
BolC9t53989H Brassica oleracea HOM05D004032 ORTHO05D004462 4.9e-10 68.6 168 37.5
BraA09t36588Z Brassica rapa HOM05D004032 ORTHO05D004462 4.9e-10 68.6 165 36.4
Nn5g30527 Nelumbo nucifera HOM05D004032 ORTHO05D004462 4.9e-10 68.6 116 44.8
Lj4A160G62 Lonicera japonica HOM05D004032 ORTHO05D004462 6.4e-10 68.2 125 42.4
A09p09370 Brassica napus HOM05D004032 ORTHO05D004462 8.4e-10 67.8 166 35.5
CSS0022714 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004462 1.1e-09 67.4 135 42.2
FAN26G2221 Fragaria x ananassa HOM05D004032 ORTHO05D004462 1.1e-09 67.4 168 35.1
Lalb_Chr09g0334051 Lupinus albus HOM05D004032 ORTHO05D004462 1.1e-09 67.4 183 32.8
A07p16510 Brassica napus HOM05D004032 ORTHO05D004462 1.4e-09 67.0 116 45.7
BraA07t29375Z Brassica rapa HOM05D004032 ORTHO05D004462 1.4e-09 67.0 116 45.7
Rhsim10G0102400 Rhododendron simsii HOM05D004032 ORTHO05D004462 1.4e-09 67.0 167 37.7
Aa31LG1G15950 Aethionema arabicum HOM05D004032 ORTHO05D004462 1.9e-09 66.6 169 36.7
Carub.0008s2709 Capsella rubella HOM05D004032 ORTHO05D004462 1.9e-09 66.6 92 46.7
Cpa.g.sc6.44 Carica papaya HOM05D004032 ORTHO05D004462 1.9e-09 66.6 139 36.7
CAN.G1075.18 Capsicum annuum HOM05D004032 ORTHO05D004462 2.4e-09 66.2 148 35.8
Lj2g0017817 Lotus japonicus HOM05D004032 ORTHO05D004462 2.4e-09 66.2 128 42.2
Nitab4.5_0000868g0010 Nicotiana tabacum HOM05D004032 ORTHO05D004462 2.4e-09 66.2 152 35.5
Oeu054187.1 Olea europaea HOM05D004032 ORTHO05D004462 2.4e-09 66.2 165 38.2
BcaB02g09927 Brassica carinata HOM05D004032 ORTHO05D004462 3.2e-09 65.9 92 48.9
Glyma.15G185500 Glycine max HOM05D004032 ORTHO05D004462 3.2e-09 65.9 141 36.9
PGR004G0357 Punica granatum HOM05D004032 ORTHO05D004462 3.2e-09 65.9 162 32.7
THA.LOC104819252 Tarenaya hassleriana HOM05D004032 ORTHO05D004462 3.2e-09 65.9 158 37.3
Atru.chr3.192 Acer truncatum HOM05D004032 ORTHO05D004462 5.5e-09 65.1 107 43.9
C07p24210 Brassica napus HOM05D004032 ORTHO05D004462 5.5e-09 65.1 116 44.8
BolC7t42948H Brassica oleracea HOM05D004032 ORTHO05D004462 5.5e-09 65.1 116 44.8
FAN23G1545 Fragaria x ananassa HOM05D004032 ORTHO05D004462 5.5e-09 65.1 168 34.5
Gohir.D03G027200 Gossypium hirsutum HOM05D004032 ORTHO05D004462 5.5e-09 65.1 131 40.5
vmacro17992 Vaccinium macrocarpon HOM05D004032 ORTHO05D004462 7.1e-09 64.7 170 35.9
Atru.chr3.163 Acer truncatum HOM05D004032 ORTHO05D004462 9.3e-09 64.3 109 43.1
BcaC06g34822 Brassica carinata HOM05D004032 ORTHO05D004462 9.3e-09 64.3 116 44.8
Lj7A88G34 Lonicera japonica HOM05D004032 ORTHO05D004462 9.3e-09 64.3 172 33.7
Lalb_Chr05g0213571 Lupinus albus HOM05D004032 ORTHO05D004462 9.3e-09 64.3 142 38.7
Sed0016234 Sechium edule HOM05D004032 ORTHO05D004462 9.3e-09 64.3 131 37.4
Rhsim08G0095200 Rhododendron simsii HOM05D004032 ORTHO05D004462 1.2e-08 63.9 120 38.3
TAR628G1371 Trochodendron aralioides HOM05D004032 ORTHO05D004462 1.2e-08 63.9 124 39.5
CSS0026387 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004462 1.6e-08 63.5 141 41.1
PSO541G5875 Papaver somniferum HOM05D004032 ORTHO05D004462 1.6e-08 63.5 127 39.4
Gorai.003G028900 Gossypium raimondii HOM05D004032 ORTHO05D004462 2.1e-08 63.2 123 41.5
Migut.H00365 Erythranthe guttata HOM05D004032 ORTHO05D004462 2.7e-08 62.8 135 40.0
PSO675G6353 Papaver somniferum HOM05D004032 ORTHO05D004462 2.7e-08 62.8 126 38.9
THA.LOC104827558 Tarenaya hassleriana HOM05D004032 ORTHO05D004462 3.5e-08 62.4 97 43.3
Gohir.A02G153200 Gossypium hirsutum HOM05D004032 ORTHO05D004462 4.6e-08 62.0 131 40.5
Hma1.2p1_0942F.1_g239820 Hydrangea macrophylla HOM05D004032 ORTHO05D004462 4.6e-08 62.0 130 38.5
Thhalv10005011m.g Eutrema salsugineum HOM05D004032 ORTHO05D004462 6.0e-08 61.6 125 38.4
Sopen02g037160 Solanum pennellii HOM05D004032 ORTHO05D004462 7.9e-08 61.2 147 36.1
Nn1g04611 Nelumbo nucifera HOM05D004032 ORTHO05D004462 1.0e-07 60.8 131 40.5
arahy.Tifrunner.gnm1.ann1.L7L2H1 Arachis hypogaea HOM05D004032 ORTHO05D004462 1.3e-07 60.5 117 40.2
AL8G43930 Arabidopsis lyrata HOM05D004032 ORTHO05D004462 1.8e-07 60.1 125 36.0
Oeu013283.1 Olea europaea HOM05D004032 ORTHO05D004462 1.8e-07 60.1 160 36.9
Hund13934 Selenicereus undatus HOM05D004032 ORTHO05D004462 2.3e-07 59.7 156 34.6
PGSC0003DMG400024938 Solanum tuberosum HOM05D004032 ORTHO05D004462 2.3e-07 59.7 131 38.2
Oeu040591.1 Olea europaea HOM05D004032 ORTHO05D004462 3.9e-07 58.9 164 37.2
Oeu040592.1 Olea europaea HOM05D004032 ORTHO05D004462 3.9e-07 58.9 164 37.2
Ah.02g125580 Amaranthus hybridus HOM05D004032 ORTHO05D004462 5.1e-07 58.5 134 35.8
Hund16386 Selenicereus undatus HOM05D004032 ORTHO05D004462 5.1e-07 58.5 140 35.0
Sc16g0000080 Simmondsia chinensis HOM05D004032 ORTHO05D004462 5.1e-07 58.5 198 28.3
THA.LOC104821233 Tarenaya hassleriana HOM05D004032 ORTHO05D004462 6.7e-07 58.2 102 45.1
Actinidia11994 Actinidia chinensis HOM05D004032 ORTHO05D004462 8.7e-07 57.8 126 41.3
arahy.Tifrunner.gnm1.ann1.7C4JLW Arachis hypogaea HOM05D004032 ORTHO05D004462 8.7e-07 57.8 117 39.3
ClCG02G012390 Citrullus lanatus HOM05D004032 ORTHO05D004462 8.7e-07 57.8 97 39.2
SalBow6G2131 Salvia bowleyana HOM05D004032 ORTHO05D004462 1.9e-06 56.6 91 39.6
SGA_v2.0_scaffold15G07422 Striga asiatica HOM05D004032 ORTHO05D004462 3.3e-06 55.8 162 34.0
CANSAT01G2482 Cannabis sativa HOM05D004032 ORTHO05D004462 5.6e-06 55.1 40 65.0
Peaxi162Scf00264g00213 Petunia axillaris HOM05D004032 ORTHO05D004462 5.6e-06 55.1 142 35.9
Oeu031171.1 Olea europaea HOM05D004032 ORTHO05D004462 7.4e-06 54.7 162 35.8
Oeu031172.1 Olea europaea HOM05D004032 ORTHO05D004462 7.4e-06 54.7 162 35.8
Solyc02g092590.3 Solanum lycopersicum HOM05D004032 ORTHO05D004462 7.4e-06 54.7 145 36.6
MELO3C020862.2 Cucumis melo HOM05D004032 ORTHO05D004462 9.6e-06 54.3 97 36.1


User provided reference genes

Program Settings