Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0439961 Helianthus annuus HOM05D007431 ORTHO05D008438 7.3e-90 334.3 232 100.0
ECA238G2926 Erigeron canadensis HOM05D007431 ORTHO05D008438 8.2e-25 118.2 200 47.5
Lsat_1_v5_gn_2_80021 Lactuca sativa HOM05D007431 ORTHO05D008438 2.5e-21 106.7 200 46.0
Lsat_1_v5_gn_8_91980 Lactuca sativa HOM05D007431 ORTHO05D008438 2.7e-20 103.2 93 63.4
ECA232G0929 Erigeron canadensis HOM05D007431 ORTHO05D008438 3.1e-16 89.7 106 53.8
AL8G36620 Arabidopsis lyrata HOM05D007431 ORTHO05D008438 6.5e-14 82.0 61 70.5
AT5G60030 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 6.5e-14 82.0 68 66.2
Carub.0002s2217 Capsella rubella HOM05D007431 ORTHO05D008438 2.5e-13 80.1 83 55.4
Cpa.g.sc139.17 Carica papaya HOM05D007431 ORTHO05D008438 3.2e-13 79.7 76 56.6
Carub.0008s2073 Capsella rubella HOM05D007431 ORTHO05D008438 1.2e-12 77.8 61 65.6
AT1G75335 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 2.1e-12 77.0 68 67.6
CSS0032205 Camellia sinensis var. sinensis HOM05D007431 ORTHO05D008438 2.7e-12 76.6 100 47.0
Lj1P179T36 Lonicera japonica HOM05D007431 ORTHO05D008438 1.0e-11 74.7 82 51.2
TAR623G0663 Trochodendron aralioides HOM05D007431 ORTHO05D008438 1.0e-11 74.7 92 46.7
Atru.chr3.3765 Acer truncatum HOM05D007431 ORTHO05D008438 1.4e-11 74.3 92 47.8
Nn2g12944 Nelumbo nucifera HOM05D007431 ORTHO05D008438 1.4e-11 74.3 91 51.6
A02p06640 Brassica napus HOM05D007431 ORTHO05D008438 2.3e-11 73.6 73 60.3
C02p11930 Brassica napus HOM05D007431 ORTHO05D008438 2.3e-11 73.6 73 60.3
BolC2t07290H Brassica oleracea HOM05D007431 ORTHO05D008438 2.3e-11 73.6 79 54.4
BraA02t05746Z Brassica rapa HOM05D007431 ORTHO05D008438 2.3e-11 73.6 73 60.3
AUR62034380 Chenopodium quinoa HOM05D007431 ORTHO05D008438 2.3e-11 73.6 87 55.2
ClCG02G020690 Citrullus lanatus HOM05D021867 ORTHO05D008438 3.0e-11 73.2 77 54.5
Dinv06340 Davidia involucrata HOM05D007431 ORTHO05D008438 5.1e-11 72.4 79 48.1
BcaB05g22609 Brassica carinata HOM05D007431 ORTHO05D008438 6.7e-11 72.0 87 54.0
Potri.019G095600 Populus trichocarpa HOM05D007431 ORTHO05D008438 6.7e-11 72.0 70 58.6
TAR369G0100 Trochodendron aralioides HOM05D007431 ORTHO05D008438 8.8e-11 71.6 99 42.4
Gohir.A03G036200 Gossypium hirsutum HOM05D007431 ORTHO05D008438 1.1e-10 71.2 102 41.2
PGR102G0834 Punica granatum HOM05D007431 ORTHO05D008438 1.1e-10 71.2 66 57.6
Thecc.09G259600 Theobroma cacao HOM05D007431 ORTHO05D008438 1.1e-10 71.2 76 46.1
Aa31LG4G15040 Aethionema arabicum HOM05D007431 ORTHO05D008438 1.5e-10 70.9 113 41.6
AUR62022321 Chenopodium quinoa HOM05D007431 ORTHO05D008438 1.5e-10 70.9 82 54.9
MELO3C025719.2 Cucumis melo HOM05D021867 ORTHO05D008438 1.5e-10 70.9 102 44.1
Sc12g0001910 Simmondsia chinensis HOM05D007431 ORTHO05D008438 1.5e-10 70.9 103 43.7
THA.LOC104810823 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 2.0e-10 70.5 93 44.1
Thecc.03G012200 Theobroma cacao HOM05D007431 ORTHO05D008438 2.0e-10 70.5 86 45.3
CANSAT11G1515 Cannabis sativa HOM05D007431 ORTHO05D008438 2.6e-10 70.1 86 50.0
COL.COLO4_18404 Corchorus olitorius HOM05D007431 ORTHO05D008438 2.6e-10 70.1 76 47.4
CsaV3_6G021930 Cucumis sativus L. HOM05D021867 ORTHO05D008438 2.6e-10 70.1 101 44.6
Eucgr.B01149 Eucalyptus grandis HOM05D007431 ORTHO05D008438 2.6e-10 70.1 68 51.5
THA.LOC104814853 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 3.3e-10 69.7 84 48.8
Aa31LG1G12150 Aethionema arabicum HOM05D007431 ORTHO05D008438 4.4e-10 69.3 99 45.5
BolC3t13774H Brassica oleracea HOM05D007431 ORTHO05D008438 4.4e-10 69.3 114 43.0
Sp6g21690 Schrenkiella parvula HOM05D007431 ORTHO05D008438 4.4e-10 69.3 95 46.3
Ciclev10028956m.g Citrus clementina HOM05D007431 ORTHO05D008438 5.7e-10 68.9 95 47.4
Lalb_Chr24g0399681 Lupinus albus HOM05D007431 ORTHO05D008438 5.7e-10 68.9 98 44.9
Sed0003904 Sechium edule HOM05D007431 ORTHO05D008438 5.7e-10 68.9 76 53.9
THA.LOC104799471 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 5.7e-10 68.9 76 50.0
Actinidia00802 Actinidia chinensis HOM05D007431 ORTHO05D008438 7.4e-10 68.6 94 43.6
BraA03t10450Z Brassica rapa HOM05D007431 ORTHO05D008438 7.4e-10 68.6 66 59.1
Hma1.2p1_0321F.1_g124100 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 9.7e-10 68.2 79 54.4
A03p11360 Brassica napus HOM05D007431 ORTHO05D008438 1.3e-09 67.8 66 57.6
Gohir.D03G132100 Gossypium hirsutum HOM05D007431 ORTHO05D008438 1.3e-09 67.8 102 38.2
Gorai.003G139000 Gossypium raimondii HOM05D007431 ORTHO05D008438 1.3e-09 67.8 102 38.2
arahy.Tifrunner.gnm1.ann1.C9XA4X Arachis hypogaea HOM05D007431 ORTHO05D008438 1.7e-09 67.4 102 47.1
EL10Ac7g15930 Beta vulgaris HOM05D008034 ORTHO05D010051 1.7e-09 67.4 59 61.0
Cfa011407 Carpinus fangiana HOM05D023024 ORTHO05D008438 1.7e-09 67.4 98 43.9
Lalb_Chr22g0356011 Lupinus albus HOM05D007431 ORTHO05D008438 1.7e-09 67.4 108 44.4
Potri.013G126701 Populus trichocarpa HOM05D007431 ORTHO05D008438 1.7e-09 67.4 68 55.9
QL01p035383 Quercus lobata HOM05D007431 ORTHO05D008438 1.7e-09 67.4 76 50.0
Sabra13G0105800 Salix brachista HOM05D007431 ORTHO05D008438 1.7e-09 67.4 68 55.9
CiPaw.14G074700 Carya illinoinensis HOM05D023024 ORTHO05D008438 2.2e-09 67.0 68 50.0
Duzib168G1071 Durio zibethinus HOM05D007431 ORTHO05D008438 2.2e-09 67.0 91 41.8
CARHR068680 Cardamine hirsuta HOM05D007431 ORTHO05D008438 2.8e-09 66.6 86 47.7
Haze_23978 Corylus avellana HOM05D023024 ORTHO05D008438 2.8e-09 66.6 92 44.6
DCAR_003389 Daucus carota HOM05D007431 ORTHO05D008438 2.8e-09 66.6 97 42.3
MBI15_g23248_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 3.7e-09 66.2 75 50.7
Sed0011387 Sechium edule HOM05D007431 ORTHO05D008438 3.7e-09 66.2 62 54.8
C03p13110 Brassica napus HOM05D007431 ORTHO05D008438 4.8e-09 65.9 66 57.6
MBI11_g07544_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 4.8e-09 65.9 75 50.7
Nn2g10588 Nelumbo nucifera HOM05D007431 ORTHO05D008438 4.8e-09 65.9 60 60.0
Glyma.17G228900 Glycine max HOM05D007431 ORTHO05D008438 6.3e-09 65.5 100 42.0
Lj5g0005730 Lotus japonicus HOM05D007431 ORTHO05D008438 6.3e-09 65.5 62 58.1
Phvul.001G035300 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 6.3e-09 65.5 60 56.7
Psat6g020440 Pisum sativum HOM05D007431 ORTHO05D008438 8.2e-09 65.1 66 54.5
TWI53G0129 Tripterygium wilfordii HOM05D007431 ORTHO05D008438 1.1e-08 64.7 65 52.3
Hma1.2p1_0321F.1_g124110 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 1.4e-08 64.3 79 51.9
MD11G1119300 Malus domestica HOM05D016629 ORTHO05D008438 1.4e-08 64.3 95 43.2
Manes.07G083300 Manihot esculenta HOM05D007431 ORTHO05D008438 1.4e-08 64.3 76 50.0
DCAR_011227 Daucus carota HOM05D007431 ORTHO05D008438 1.8e-08 63.9 106 39.6
DCAR_011228 Daucus carota HOM05D007431 ORTHO05D008438 1.8e-08 63.9 106 39.6
MBI18_g47623_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 1.8e-08 63.9 75 48.0
RhsimUnG0043300 Rhododendron simsii HOM05D002794 ORTHO05D008438 2.4e-08 63.5 95 45.3
Sabra19G0107900 Salix brachista HOM05D007431 ORTHO05D008438 2.4e-08 63.5 68 52.9
Aqoxy4G03128 Aquilegia oxysepala HOM05D007431 ORTHO05D008438 3.1e-08 63.2 91 48.4
MD03G1106700 Malus domestica HOM05D016629 ORTHO05D008438 3.1e-08 63.2 56 60.7
MBI15_g23251_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 4.1e-08 62.8 75 48.0
Medtr1g016270 Medicago truncatula HOM05D007431 ORTHO05D008438 4.1e-08 62.8 85 47.1
PSO339G3784 Papaver somniferum HOM05D007431 ORTHO05D008438 9.1e-08 61.6 76 44.7
PSO384G2622 Papaver somniferum HOM05D007431 ORTHO05D008438 9.1e-08 61.6 76 44.7
Prupe.6G089500 Prunus persica HOM05D016629 ORTHO05D008438 9.1e-08 61.6 82 47.6
MBI15_g23247_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 1.2e-07 61.2 74 47.3
Nitab4.5_0002380g0010 Nicotiana tabacum HOM05D015294 ORTHO05D018867 1.2e-07 61.2 85 43.5
TPR.G26566 Trifolium pratense HOM05D007431 ORTHO05D008438 1.2e-07 61.2 98 43.9
VMungo0647G2370 Vigna mungo HOM05D007431 ORTHO05D008438 1.2e-07 61.2 106 45.3
CDE02G3020 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 1.5e-07 60.8 95 41.1
Ca_13166_v3 Cicer arietinum L. HOM05D007431 ORTHO05D008438 1.5e-07 60.8 78 48.7
Glyma.14G094600 Glycine max HOM05D007431 ORTHO05D008438 1.5e-07 60.8 101 44.6
Phvul.001G035400 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 1.5e-07 60.8 66 53.0
Ah.15g096430 Amaranthus hybridus HOM05D007431 ORTHO05D008438 2.0e-07 60.5 81 46.9
CDE01G0792 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 2.0e-07 60.5 62 51.6
Psat2g042560 Pisum sativum HOM05D007431 ORTHO05D008438 2.6e-07 60.1 50 66.0
Sed0014169 Sechium edule HOM05D007431 ORTHO05D008438 2.6e-07 60.1 81 49.4
Lj3g0021288 Lotus japonicus HOM05D002777 ORTHO05D001516 4.5e-07 59.3 62 53.2
Dinv32831 Davidia involucrata HOM05D001089 ORTHO05D008438 7.7e-07 58.5 61 49.2
Nitab4.5_0004839g0050 Nicotiana tabacum HOM05D015294 ORTHO05D018867 1.0e-06 58.2 94 38.3
Haze_02139 Corylus avellana HOM05D023024 ORTHO05D008438 1.7e-06 57.4 89 42.7
Peaxi162Scf00616g00064 Petunia axillaris HOM05D015294 ORTHO05D018867 2.9e-06 56.6 79 38.0


User provided reference genes

Program Settings