Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0439311 Helianthus annuus HOM05D007025 ORTHO05D008862 5.5e-77 290.8 139 100.0
Lsat_1_v5_gn_2_83821 Lactuca sativa HOM05D007025 ORTHO05D008862 6.0e-23 111.3 69 72.5
Lsat_1_v5_gn_5_79400 Lactuca sativa HOM05D007025 ORTHO05D008862 6.0e-23 111.3 66 74.2
ECA238G2407 Erigeron canadensis HOM05D007025 ORTHO05D008862 3.1e-19 99.0 66 68.2
CiPaw.09G091100 Carya illinoinensis HOM05D007025 ORTHO05D008862 2.2e-17 92.8 78 52.6
Prupe.6G079900 Prunus persica HOM05D007025 ORTHO05D008862 3.8e-17 92.0 81 50.6
CiPaw.13G095900 Carya illinoinensis HOM05D007025 ORTHO05D008862 4.9e-17 91.7 86 48.8
Manes.04G033800 Manihot esculenta HOM05D007025 ORTHO05D008862 4.9e-17 91.7 78 55.1
EL10Ac7g15997 Beta vulgaris HOM05D007025 ORTHO05D008862 1.9e-16 89.7 78 56.4
Aqoxy1G00724 Aquilegia oxysepala HOM05D007025 ORTHO05D008862 2.4e-16 89.4 78 50.0
CSS0049041 Camellia sinensis var. sinensis HOM05D007025 ORTHO05D008862 3.2e-16 89.0 57 64.9
MELO3C026555.2 Cucumis melo HOM05D007025 ORTHO05D008862 3.2e-16 89.0 66 60.6
TAR374G1462 Trochodendron aralioides HOM05D007025 ORTHO05D008862 3.2e-16 89.0 80 53.8
CsaV3_6G031770 Cucumis sativus L. HOM05D007025 ORTHO05D008862 4.2e-16 88.6 81 53.1
Aqoxy7G01971 Aquilegia oxysepala HOM05D007025 ORTHO05D008862 7.1e-16 87.8 78 50.0
CiPaw.14G069900 Carya illinoinensis HOM05D007025 ORTHO05D008862 7.1e-16 87.8 78 50.0
PGSC0003DMG400030317 Solanum tuberosum HOM05D007025 ORTHO05D008862 7.1e-16 87.8 58 63.8
COL.COLO4_20470 Corchorus olitorius HOM05D007025 ORTHO05D008862 9.3e-16 87.4 78 52.6
Nitab4.5_0004078g0030 Nicotiana tabacum HOM05D007025 ORTHO05D008862 9.3e-16 87.4 78 51.3
Solyc11g066070.2 Solanum lycopersicum HOM05D007025 ORTHO05D008862 9.3e-16 87.4 78 52.6
Sopen11g025810 Solanum pennellii HOM05D007025 ORTHO05D008862 9.3e-16 87.4 78 52.6
PGSC0003DMG400000442 Solanum tuberosum HOM05D007025 ORTHO05D008862 9.3e-16 87.4 78 52.6
Ciclev10003169m.g Citrus clementina HOM05D007025 ORTHO05D008862 1.2e-15 87.0 80 51.2
unitig_749.g14331 Utricularia gibba HOM05D007025 ORTHO05D008862 1.2e-15 87.0 81 48.1
Nitab4.5_0001800g0060 Nicotiana tabacum HOM05D007025 ORTHO05D008862 1.6e-15 86.7 79 50.6
Peaxi162Scf00406g00059 Petunia axillaris HOM05D007025 ORTHO05D008862 1.6e-15 86.7 78 51.3
Thecc.09G323800 Theobroma cacao HOM05D007025 ORTHO05D008862 1.6e-15 86.7 57 66.7
Aa31sc152G30 Aethionema arabicum HOM05D007025 ORTHO05D008862 2.1e-15 86.3 78 52.6
Haze_24077 Corylus avellana HOM05D007025 ORTHO05D008862 2.1e-15 86.3 84 50.0
Solyc06g076010.3 Solanum lycopersicum HOM05D007025 ORTHO05D008862 2.1e-15 86.3 57 63.2
Sopen06g032420 Solanum pennellii HOM05D007025 ORTHO05D008862 2.1e-15 86.3 57 63.2
Carub.0001s3607 Capsella rubella HOM05D007025 ORTHO05D008862 2.7e-15 85.9 78 51.3
Cc01_g12710 Coffea canephora HOM05D007025 ORTHO05D008862 2.7e-15 85.9 66 53.0
QL06p002232 Quercus lobata HOM05D007025 ORTHO05D008862 2.7e-15 85.9 78 48.7
CAN.G764.4 Capsicum annuum HOM05D007025 ORTHO05D008862 3.5e-15 85.5 78 51.3
ClCG08G009640 Citrullus lanatus HOM05D007025 ORTHO05D008862 3.5e-15 85.5 57 59.6
PGR102G0249 Punica granatum HOM05D007025 ORTHO05D008862 4.6e-15 85.1 78 51.3
unitig_26.g9279 Utricularia gibba HOM05D007025 ORTHO05D008862 4.6e-15 85.1 81 50.6
Cpa.g.sc840.2 Carica papaya HOM05D007025 ORTHO05D008862 6.0e-15 84.7 57 63.2
Cfa003375 Carpinus fangiana HOM05D007025 ORTHO05D008862 6.0e-15 84.7 78 51.3
FvH4_3g35770 Fragaria vesca HOM05D007025 ORTHO05D008862 6.0e-15 84.7 57 59.6
FAN11G3513 Fragaria x ananassa HOM05D007025 ORTHO05D008862 6.0e-15 84.7 57 59.6
FAN16G3493 Fragaria x ananassa HOM05D007025 ORTHO05D008862 6.0e-15 84.7 57 59.6
FAN25G2181 Fragaria x ananassa HOM05D007025 ORTHO05D008862 6.0e-15 84.7 57 59.6
CANSAT54G1063 Cannabis sativa HOM05D007025 ORTHO05D008862 7.8e-15 84.3 57 61.4
CARHR036850 Cardamine hirsuta HOM05D007025 ORTHO05D008862 7.8e-15 84.3 79 51.9
QL10p005425 Quercus lobata HOM05D007025 ORTHO05D008862 7.8e-15 84.3 78 47.4
GSVIVG01024988001 Vitis vinifera HOM05D007025 ORTHO05D008862 7.8e-15 84.3 78 51.3
AL1G53430 Arabidopsis lyrata HOM05D007025 ORTHO05D008862 1.0e-14 84.0 78 51.3
AT1G47278 Arabidopsis thaliana HOM05D007025 ORTHO05D008862 1.0e-14 84.0 78 51.3
Eucgr.J02059 Eucalyptus grandis HOM05D007025 ORTHO05D008862 1.0e-14 84.0 78 50.0
RcHm_v2.0_Chr5g0006711 Rosa chinensis HOM05D007025 ORTHO05D008862 1.0e-14 84.0 57 59.6
RcHm_v2.0_Chr5g0063941 Rosa chinensis HOM05D007025 ORTHO05D008862 1.0e-14 84.0 57 59.6
TWI79G0521 Tripterygium wilfordii HOM05D007025 ORTHO05D008862 1.0e-14 84.0 78 47.4
Thhalv10011908m.g Eutrema salsugineum HOM05D007025 ORTHO05D008862 1.7e-14 83.2 77 50.6
Hma1.2p1_1888F.1_g306550 Hydrangea macrophylla HOM05D007025 ORTHO05D008862 1.7e-14 83.2 66 51.5
Duzib168G1407 Durio zibethinus HOM05D007025 ORTHO05D008862 3.9e-14 82.0 78 51.3
FAN21G1635 Fragaria x ananassa HOM05D007025 ORTHO05D008862 3.9e-14 82.0 57 57.9
Hund04979 Selenicereus undatus HOM05D007025 ORTHO05D008862 5.1e-14 81.6 66 56.1
THA.LOC104810785 Tarenaya hassleriana HOM05D007025 ORTHO05D008862 5.1e-14 81.6 78 47.4
ATR0800G159 Amborella trichopoda HOM05D007025 ORTHO05D008862 6.6e-14 81.3 78 50.0
Gohir.A03G041000 Gossypium hirsutum HOM05D007025 ORTHO05D008862 6.6e-14 81.3 78 50.0
Sed0024062 Sechium edule HOM05D007025 ORTHO05D008862 6.6e-14 81.3 57 59.6
BolC8t47490H Brassica oleracea HOM05D007025 ORTHO05D008862 1.1e-13 80.5 67 50.7
Gohir.D03G127100 Gossypium hirsutum HOM05D007025 ORTHO05D008862 1.1e-13 80.5 78 50.0
Gorai.003G133500 Gossypium raimondii HOM05D007025 ORTHO05D008862 1.1e-13 80.5 78 50.0
Rhsim09G0044100 Rhododendron simsii HOM05D007025 ORTHO05D008862 1.1e-13 80.5 78 48.7
Migut.C01196 Erythranthe guttata HOM05D007025 ORTHO05D008862 2.5e-13 79.3 78 48.7
Sp1g34420 Schrenkiella parvula HOM05D007025 ORTHO05D008862 2.5e-13 79.3 77 49.4
vmacro00530 Vaccinium macrocarpon HOM05D007025 ORTHO05D008862 2.5e-13 79.3 78 50.0
Os03g0276700 Oryza sativa ssp. japonica HOM05D007025 ORTHO05D008862 4.3e-13 78.6 57 57.9
BcaB04g17532 Brassica carinata HOM05D007025 ORTHO05D008862 5.6e-13 78.2 77 48.1
CDE11G0504 Ceratophyllum demersum HOM05D007025 ORTHO05D008862 5.6e-13 78.2 66 51.5
Os08g0422300 Oryza sativa ssp. japonica HOM05D007025 ORTHO05D008862 5.6e-13 78.2 57 59.6
BcaC07g37223 Brassica carinata HOM05D007025 ORTHO05D008862 1.3e-12 77.0 77 46.8
A08p05760 Brassica napus HOM05D007025 ORTHO05D008862 1.3e-12 77.0 77 46.8
C08p06430 Brassica napus HOM05D007025 ORTHO05D008862 1.3e-12 77.0 77 46.8
BraA08t32579Z Brassica rapa HOM05D007025 ORTHO05D008862 1.3e-12 77.0 77 46.8
SGA_v2.0_scaffold118G32439 Striga asiatica HOM05D007025 ORTHO05D008862 1.3e-12 77.0 81 48.1
MBI05_g06554_MAGBIO Magnolia biondii HOM05D007025 ORTHO05D008862 1.6e-12 76.6 57 56.1
arahy.Tifrunner.gnm1.ann1.UND1EB Arachis hypogaea HOM05D007025 ORTHO05D008862 2.1e-12 76.3 78 46.2
Phvul.002G188200 Phaseolus vulgaris HOM05D007025 ORTHO05D008862 2.1e-12 76.3 66 50.0
Nn5g26960 Nelumbo nucifera HOM05D007025 ORTHO05D008862 2.8e-12 75.9 79 46.8
PSO384G2653 Papaver somniferum HOM05D007025 ORTHO05D008862 2.8e-12 75.9 68 47.1
Atru.chr3.3859 Acer truncatum HOM05D007025 ORTHO05D008862 3.6e-12 75.5 66 47.0
arahy.Tifrunner.gnm1.ann1.XVFR0N Arachis hypogaea HOM05D007025 ORTHO05D008862 3.6e-12 75.5 78 46.2
SalBow5G5439 Salvia bowleyana HOM05D007025 ORTHO05D008862 6.2e-12 74.7 57 52.6
Glyma.08G088800 Glycine max HOM05D007025 ORTHO05D008862 2.4e-11 72.8 66 47.0
Lalb_Chr12g0209151 Lupinus albus HOM05D007025 ORTHO05D008862 2.4e-11 72.8 66 45.5
Lalb_Chr12g0209181 Lupinus albus HOM05D007025 ORTHO05D008862 2.4e-11 72.8 66 45.5
Phvul.007G101100 Phaseolus vulgaris HOM05D007025 ORTHO05D008862 3.1e-11 72.4 66 48.5
Glyma.05G134100 Glycine max HOM05D007025 ORTHO05D008862 5.3e-11 71.6 66 45.5
Medtr4g094750 Medicago truncatula HOM05D007025 ORTHO05D008862 2.6e-10 69.3 66 40.9
Psat7g087480 Pisum sativum HOM05D007025 ORTHO05D008862 2.6e-10 69.3 66 40.9
TPR.G23830 Trifolium pratense HOM05D007025 ORTHO05D008862 2.2e-09 66.2 66 40.9
SHI05954 Sapria himalayana HOM05D007025 ORTHO05D008862 2.9e-09 65.9 57 47.4
Lj1g0011371 Lotus japonicus HOM05D007025 ORTHO05D008862 3.8e-09 65.5 66 42.4
Lj4g0013158 Lotus japonicus HOM05D007025 ORTHO05D008862 3.8e-09 65.5 66 42.4
Potri.009G029400 Populus trichocarpa HOM05D007025 ORTHO05D008862 1.9e-08 63.2 66 42.4
FvH4_2g11050 Fragaria vesca HOM05D007025 ORTHO05D008862 2.7e-07 59.3 66 45.5
FAN24G0628 Fragaria x ananassa HOM05D007025 ORTHO05D008862 2.7e-07 59.3 66 45.5
Mapoly0032s0020 Marchantia polymorpha HOM05D007025 ORTHO05D008862 3.9e-06 55.5 65 33.8


User provided reference genes

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