Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 2.9e-78 295.4 181 100.0
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 5.3e-64 248.1 184 77.2
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 2.5e-53 212.6 132 84.8
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 1.2e-50 203.8 131 78.6
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 2.0e-47 193.0 135 73.3
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 1.0e-46 190.7 146 70.5
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 1.3e-46 190.3 131 72.5
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 1.7e-46 189.9 135 70.4
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 1.7e-46 189.9 135 70.4
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 1.7e-46 189.9 152 65.8
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 2.3e-46 189.5 135 71.9
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 2.3e-46 189.5 135 71.9
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 2.3e-46 189.5 138 71.0
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 3.8e-46 188.7 135 74.1
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 6.6e-46 188.0 142 68.3
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 8.6e-46 187.6 149 69.1
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 1.1e-45 187.2 142 67.6
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 4.2e-45 185.3 131 71.0
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 9.5e-45 184.1 134 70.1
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 1.6e-44 183.3 144 68.1
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 2.1e-44 183.0 146 65.8
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 2.8e-44 182.6 153 62.7
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 2.8e-44 182.6 150 66.7
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 2.8e-44 182.6 139 70.5
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 8.0e-44 181.0 149 64.4
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 8.0e-44 181.0 132 72.0
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.8e-43 179.9 161 61.5
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 2.3e-43 179.5 152 65.1
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 3.0e-43 179.1 135 68.1
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 4.0e-43 178.7 148 63.5
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 6.8e-43 177.9 135 67.4
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 8.9e-43 177.6 136 68.4
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 8.9e-43 177.6 146 63.7
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 1.2e-42 177.2 187 54.5
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 1.5e-42 176.8 163 61.3
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 3.4e-42 175.6 179 62.0
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 4.4e-42 175.3 157 61.1
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 4.4e-42 175.3 135 68.1
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 7.5e-42 174.5 173 54.9
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 9.8e-42 174.1 139 64.7
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 1.7e-41 173.3 151 62.3
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 1.7e-41 173.3 158 60.8
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 1.7e-41 173.3 135 66.7
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 2.2e-41 172.9 150 64.7
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 2.8e-41 172.6 149 62.4
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 4.9e-41 171.8 154 61.7
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 8.3e-41 171.0 131 66.4
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 8.3e-41 171.0 149 62.4
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 1.8e-40 169.9 152 61.8
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 2.4e-40 169.5 133 63.9
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 2.4e-40 169.5 153 60.1
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 2.4e-40 169.5 153 60.8
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 7.0e-40 167.9 134 67.2
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 9.2e-40 167.5 135 66.7
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 1.2e-39 167.2 133 64.7
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 2.7e-39 166.0 151 58.3
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 2.7e-39 166.0 135 63.0
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 3.5e-39 165.6 136 65.4
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 5.9e-39 164.9 151 58.9
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 5.9e-39 164.9 150 59.3
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 7.8e-39 164.5 159 58.5
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.0e-38 164.1 138 63.8
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.7e-38 163.3 153 56.2
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 2.3e-38 162.9 139 60.4
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 2.3e-38 162.9 152 56.6
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 2.3e-38 162.9 152 57.2
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 2.9e-38 162.5 151 57.0
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 3.9e-38 162.2 144 61.1
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.9e-38 162.2 153 56.2
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.9e-38 162.2 153 56.2
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 8.6e-38 161.0 168 51.2
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 8.6e-38 161.0 151 57.0
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 8.6e-38 161.0 151 56.3
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 8.6e-38 161.0 151 56.3
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 8.6e-38 161.0 151 56.3
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 8.6e-38 161.0 151 56.3
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.5e-37 160.2 151 56.3
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 3.3e-37 159.1 151 58.9
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 3.3e-37 159.1 151 55.0
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 3.3e-37 159.1 131 64.9
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 3.3e-37 159.1 152 54.6
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 5.6e-37 158.3 151 54.3
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 7.3e-37 157.9 151 55.0
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 7.3e-37 157.9 151 54.3
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 7.3e-37 157.9 151 54.3
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 7.3e-37 157.9 136 58.8
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 9.5e-37 157.5 151 53.6
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-36 157.1 151 54.3
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 1.6e-36 156.8 161 53.4
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.1e-36 156.4 137 61.3
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 2.1e-36 156.4 136 61.8
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 4.7e-36 155.2 153 58.2
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 8.0e-36 154.5 186 58.6
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 8.0e-36 154.5 159 52.8
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 8.0e-36 154.5 151 53.0
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 1.0e-35 154.1 145 53.8
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 5.2e-35 151.8 193 47.7
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.0e-34 149.8 153 54.2
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 3.4e-34 149.1 148 56.8
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 4.4e-34 148.7 126 59.5
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.3e-33 147.1 136 58.8
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 4.9e-33 145.2 140 54.3
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 4.9e-33 145.2 146 52.7
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 4.9e-33 145.2 130 60.8
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 8.3e-33 144.4 147 53.7
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 1.1e-32 144.1 152 51.3
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 4.1e-32 142.1 131 58.8
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 7.8e-31 137.9 139 54.0
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 6.6e-30 134.8 135 56.3
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 8.6e-30 134.4 151 49.7
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 2.8e-28 129.4 144 48.6
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 6.8e-27 124.8 153 46.4
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 8.9e-27 124.4 105 61.9
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.6e-26 122.9 135 52.6
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 6.4e-25 118.2 154 46.8
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 6.4e-25 118.2 154 46.8
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 6.4e-25 118.2 154 46.8
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 1.1e-24 117.5 154 46.8
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 1.1e-24 117.5 154 46.8
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 4.1e-24 115.5 164 45.7
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 5.4e-24 115.2 156 46.2
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 5.4e-24 115.2 155 47.1
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 5.4e-24 115.2 155 47.1
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 9.2e-24 114.4 155 46.5
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 2.1e-23 113.2 176 42.6
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 2.1e-23 113.2 164 45.1
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 4.6e-23 112.1 141 59.6
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 1.7e-22 110.2 138 52.2
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 2.3e-22 109.8 149 47.7
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 3.9e-22 109.0 150 46.0
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 9.5e-21 104.4 132 48.5
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 8.1e-20 101.3 155 44.5
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 2.0e-18 96.7 90 61.1
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 2.0e-18 96.7 114 49.1
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 3.2e-16 89.4 151 44.4
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 3.2e-16 89.4 151 44.4
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 4.6e-15 85.5 67 67.2
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 5.1e-06 55.5 157 33.8


User provided reference genes

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