Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 8.3e-138 494.2 350 100.0
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 5.1e-95 352.1 364 79.4
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 1.2e-88 330.9 352 69.9
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 4.8e-69 265.8 356 69.1
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 4.8e-69 265.8 360 65.8
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 4.0e-68 262.7 353 57.5
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 6.9e-68 261.9 354 66.7
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 1.5e-67 260.8 358 64.8
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 3.4e-67 259.6 359 63.0
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 5.8e-67 258.8 353 48.2
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 1.0e-66 258.1 354 65.8
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 1.3e-66 257.7 383 66.1
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 3.8e-66 256.1 357 60.8
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 3.8e-66 256.1 353 65.2
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 1.4e-65 254.2 352 63.4
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.9e-65 253.8 370 65.9
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 7.1e-65 251.9 369 65.0
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 9.3e-65 251.5 352 61.1
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 9.3e-65 251.5 355 65.4
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 9.3e-65 251.5 356 59.3
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 4.6e-64 249.2 364 65.1
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 4.6e-64 249.2 351 60.7
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 1.3e-63 247.7 365 64.1
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 1.3e-63 247.7 357 64.7
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 8.7e-63 245.0 361 51.8
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 8.7e-63 245.0 357 58.0
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 1.9e-62 243.8 356 62.1
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 1.9e-62 243.8 360 56.7
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 2.5e-62 243.4 355 54.4
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 5.7e-62 242.3 370 65.7
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 5.7e-62 242.3 355 52.4
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 1.3e-61 241.1 351 57.8
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 1.1e-60 238.0 366 59.3
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 1.4e-60 237.7 360 64.2
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 1.8e-60 237.3 369 63.4
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 1.8e-60 237.3 353 65.4
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 1.8e-60 237.3 354 56.5
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 1.8e-60 237.3 353 64.6
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 3.1e-60 236.5 358 46.4
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 2.0e-59 233.8 362 59.4
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 4.5e-59 232.6 354 61.9
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 4.5e-59 232.6 354 61.9
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 5.9e-59 232.3 364 61.3
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 5.9e-59 232.3 360 63.9
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 7.7e-59 231.9 353 52.1
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 2.2e-58 230.3 352 61.9
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 5.0e-58 229.2 368 63.6
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 1.4e-57 227.6 352 63.9
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.4e-57 227.6 354 44.6
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 3.2e-57 226.5 350 54.0
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 4.2e-57 226.1 377 60.2
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 5.5e-57 225.7 352 63.6
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 7.2e-57 225.3 366 60.4
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 9.4e-57 224.9 354 44.4
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 9.4e-57 224.9 367 61.9
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.2e-56 224.6 356 62.4
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 2.1e-56 223.8 352 58.2
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 2.7e-56 223.4 355 55.5
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 3.6e-56 223.0 364 57.4
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 1.4e-55 221.1 355 58.3
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 3.9e-55 219.5 377 60.2
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 3.3e-54 216.5 351 63.0
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 4.3e-54 216.1 154 71.4
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 9.7e-54 214.9 369 59.6
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 9.7e-54 214.9 368 50.3
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 1.3e-53 214.5 377 59.7
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 6.3e-53 212.2 360 55.8
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 1.1e-52 211.5 377 61.0
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 1.4e-52 211.1 361 50.1
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 3.1e-52 209.9 363 52.1
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 6.9e-52 208.8 360 51.9
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 2.6e-51 206.8 391 57.5
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 2.6e-51 206.8 368 40.8
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 4.5e-51 206.1 363 52.1
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 5.9e-51 205.7 360 53.3
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 1.3e-50 204.5 359 51.5
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 1.3e-50 204.5 359 51.5
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 2.2e-50 203.8 360 53.3
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 8.5e-50 201.8 356 54.8
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 5.5e-49 199.1 360 50.3
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 3.3e-46 189.9 390 52.3
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 2.8e-45 186.8 356 56.2
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 4.1e-44 183.0 353 44.8
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 5.3e-44 182.6 359 50.1
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 2.9e-42 176.8 300 53.7
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 1.4e-41 174.5 276 68.8
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 5.5e-41 172.6 362 55.8
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 3.6e-40 169.9 201 48.8
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 3.6e-40 169.9 365 39.5
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 4.7e-40 169.5 343 55.7
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 1.0e-39 168.3 396 52.5
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 2.6e-38 163.7 361 51.8
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 9.7e-38 161.8 146 59.6
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 3.7e-37 159.8 156 55.8
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 1.6e-35 154.5 378 51.3
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 2.0e-35 154.1 122 64.8
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 1.0e-34 151.8 124 62.9
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.5e-33 147.9 146 58.2
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 1.0e-31 141.7 286 58.4
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 1.2e-30 138.3 258 58.1
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 5.7e-30 136.0 113 58.4
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 1.5e-25 121.3 403 38.2
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 2.1e-24 117.5 498 38.4
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 8.0e-24 115.5 153 44.4
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 1.8e-23 114.4 277 50.9
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 6.8e-23 112.5 95 58.9
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 6.8e-23 112.5 192 37.5
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 5.7e-22 109.4 89 60.7
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 5.7e-22 109.4 91 69.2
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 1.3e-21 108.2 94 58.5
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 7.0e-20 102.4 95 54.7
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 8.6e-18 95.5 193 34.2
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 2.8e-16 90.5 170 32.9
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 8.0e-16 89.0 105 57.1
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.8e-15 85.9 113 45.1
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.5e-14 84.7 80 68.8
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.1e-12 78.6 78 66.7
arahy.Tifrunner.gnm1.ann1.UC8GQG Arachis hypogaea HOM05D008215 ORTHO05D004366 1.4e-12 78.2 99 46.5
arahy.Tifrunner.gnm1.ann1.281UCZ Arachis hypogaea HOM05D008215 ORTHO05D004366 3.2e-12 77.0 99 44.4
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.2e-12 77.0 73 54.8
arahy.Tifrunner.gnm1.ann1.8QJJ59 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.2e-12 77.0 99 44.4
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 7.0e-12 75.9 96 44.8
arahy.Tifrunner.gnm1.ann1.696ALD Arachis hypogaea HOM05D008215 ORTHO05D004366 1.6e-11 74.7 73 54.8
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea HOM05D006566 ORTHO05D004366 4.5e-11 73.2 62 58.1
arahy.Tifrunner.gnm1.ann1.08U2RY Arachis hypogaea HOM05D008215 ORTHO05D004366 7.8e-11 72.4 99 42.4
Oeu042970.1 Olea europaea HOM05D006566 ORTHO05D004366 7.8e-11 72.4 85 51.8
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 4.3e-09 66.6 55 54.5
arahy.Tifrunner.gnm1.ann1.1P551D Arachis hypogaea HOM05D008215 ORTHO05D004366 5.6e-09 66.2 100 42.0
arahy.Tifrunner.gnm1.ann1.U9CRBQ Arachis hypogaea HOM05D008215 ORTHO05D004366 5.6e-09 66.2 100 42.0
arahy.Tifrunner.gnm1.ann1.0AYN0M Arachis hypogaea HOM05D008215 ORTHO05D004366 7.3e-09 65.9 100 42.0
arahy.Tifrunner.gnm1.ann1.J3W7RL Arachis hypogaea HOM05D008215 ORTHO05D004366 1.2e-08 65.1 100 42.0
arahy.Tifrunner.gnm1.ann1.P1RV09 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.6e-08 64.7 100 41.0
arahy.Tifrunner.gnm1.ann1.1NHG9F Arachis hypogaea HOM05D008215 ORTHO05D004366 3.6e-08 63.5 100 40.0
arahy.Tifrunner.gnm1.ann1.3DHQ20 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.6e-08 63.5 100 41.0
arahy.Tifrunner.gnm1.ann1.TAU4F3 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.6e-08 63.5 89 42.7
arahy.Tifrunner.gnm1.ann1.8K6P1P Arachis hypogaea HOM05D008215 ORTHO05D004366 4.7e-08 63.2 89 43.8
arahy.Tifrunner.gnm1.ann1.KE1U92 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.1e-08 62.8 100 39.0
arahy.Tifrunner.gnm1.ann1.N5TKCQ Arachis hypogaea HOM05D008215 ORTHO05D004366 6.1e-08 62.8 109 38.5
arahy.Tifrunner.gnm1.ann1.U6CLNF Arachis hypogaea HOM05D008215 ORTHO05D004366 6.1e-08 62.8 100 39.0
arahy.Tifrunner.gnm1.ann1.PJX35B Arachis hypogaea HOM05D008215 ORTHO05D004366 1.0e-07 62.0 100 39.0
arahy.Tifrunner.gnm1.ann1.15M8G9 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.3e-07 60.8 100 39.0
arahy.Tifrunner.gnm1.ann1.01UHHT Arachis hypogaea HOM05D008215 ORTHO05D004366 4.0e-07 60.1 100 40.0
arahy.Tifrunner.gnm1.ann1.8PL5QC Arachis hypogaea HOM05D008215 ORTHO05D004366 5.2e-07 59.7 99 38.4
arahy.Tifrunner.gnm1.ann1.AZ2039 Arachis hypogaea HOM05D008215 ORTHO05D004366 5.8e-06 56.2 54 53.7
arahy.Tifrunner.gnm1.ann1.BH3K81 Arachis hypogaea HOM05D008215 ORTHO05D004366 9.8e-06 55.5 56 51.8
arahy.Tifrunner.gnm1.ann1.IYQ4QW Arachis hypogaea HOM05D008215 ORTHO05D004366 9.8e-06 55.5 56 51.8
arahy.Tifrunner.gnm1.ann1.TNWQ22 Arachis hypogaea HOM05D008215 ORTHO05D004366 9.8e-06 55.5 56 51.8


User provided reference genes

Program Settings