Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 3.5e-155 551.6 281 100.0
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 1.3e-130 469.9 283 85.9
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 4.2e-124 448.4 287 83.6
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 5.0e-101 371.7 285 68.1
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 2.5e-100 369.4 265 72.1
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 7.2e-100 367.9 286 67.5
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 3.6e-99 365.5 286 67.1
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 1.4e-98 363.6 286 66.4
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 3.0e-98 362.5 246 74.8
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 6.7e-98 361.3 220 81.8
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 2.0e-97 359.8 228 79.4
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 3.3e-97 359.0 271 70.1
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 3.3e-97 359.0 270 69.6
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 4.4e-97 358.6 294 67.7
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 7.4e-97 357.8 223 79.8
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 1.3e-96 357.1 281 67.6
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 1.7e-96 356.7 267 68.9
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 2.8e-96 355.9 273 68.9
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 2.8e-96 355.9 276 68.5
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 4.8e-96 355.1 279 69.5
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 6.3e-96 354.8 267 69.7
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 8.2e-96 354.4 269 70.6
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 8.2e-96 354.4 224 80.4
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 1.4e-95 353.6 241 75.5
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 1.8e-95 353.2 241 75.1
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 3.1e-95 352.4 217 81.1
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 5.3e-95 351.7 223 79.8
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 2.0e-94 349.7 243 72.4
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 2.0e-94 349.7 296 63.2
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 4.5e-94 348.6 252 69.0
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 7.7e-94 347.8 271 67.9
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 1.3e-93 347.1 252 68.7
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 1.3e-93 347.1 290 66.9
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.3e-93 347.1 274 67.9
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.7e-93 346.7 275 67.6
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 1.7e-93 346.7 280 65.7
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 2.9e-93 345.9 266 68.8
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 5.0e-93 345.1 254 68.1
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 6.5e-93 344.7 273 67.8
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 6.5e-93 344.7 282 65.2
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 1.1e-92 344.0 272 65.4
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 1.9e-92 343.2 216 78.7
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 2.5e-92 342.8 296 64.2
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 3.2e-92 342.4 265 68.7
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 3.2e-92 342.4 265 67.9
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 5.5e-92 341.7 247 67.6
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 5.5e-92 341.7 276 65.2
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 7.2e-92 341.3 287 64.8
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 9.4e-92 340.9 248 68.5
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 9.4e-92 340.9 279 64.9
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 1.2e-91 340.5 282 63.8
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 2.1e-91 339.7 235 72.3
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 2.1e-91 339.7 226 74.3
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 2.1e-91 339.7 226 74.3
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 2.1e-91 339.7 276 65.9
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 2.1e-91 339.7 290 62.4
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 2.7e-91 339.3 290 64.1
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 6.1e-91 338.2 239 69.0
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 6.1e-91 338.2 263 66.2
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 6.1e-91 338.2 216 78.2
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 6.1e-91 338.2 266 66.5
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 1.0e-90 337.4 226 76.5
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 2.3e-90 336.3 265 66.8
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 3.0e-90 335.9 214 79.0
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 5.2e-90 335.1 274 63.9
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 6.7e-90 334.7 197 81.7
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 8.8e-90 334.3 221 74.2
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 1.1e-89 334.0 216 77.8
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 2.0e-89 333.2 216 75.0
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 3.3e-89 332.4 236 70.8
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 4.4e-89 332.0 274 63.9
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 9.7e-89 330.9 229 72.5
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 1.3e-88 330.5 277 64.3
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 1.7e-88 330.1 199 80.9
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 1.4e-87 327.0 279 63.1
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 1.4e-87 327.0 228 70.6
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 4.1e-87 325.5 278 64.4
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 4.1e-87 325.5 289 62.6
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 2.6e-86 322.8 246 67.1
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 3.5e-86 322.4 225 72.9
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 3.5e-86 322.4 225 72.9
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 5.9e-86 321.6 204 77.0
Rhsim08G0079500 Rhododendron simsii HOM05D006042 ORTHO05D007658 3.2e-84 315.8 301 60.5
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 1.6e-83 313.5 213 72.3
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 2.3e-82 309.7 184 79.9
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 8.8e-82 307.8 173 85.0
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 4.4e-81 305.4 340 54.1
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 5.7e-81 305.1 184 78.8
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 6.3e-80 301.6 215 72.1
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 8.2e-80 301.2 170 85.3
Ca_26178_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 5.9e-78 295.0 247 64.0
SGA_v2.0_scaffold49G18090 Striga asiatica HOM05D006042 ORTHO05D007658 1.0e-77 294.3 261 62.1
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 2.2e-77 293.1 222 65.8
EL10Ac2g04605 Beta vulgaris HOM05D006042 ORTHO05D007658 3.8e-77 292.4 207 70.0
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 1.1e-76 290.8 226 65.5
Dinv34847 Davidia involucrata HOM05D006042 ORTHO05D007658 1.9e-76 290.0 222 69.8
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 3.6e-75 285.8 229 64.6
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea HOM05D006042 ORTHO05D007658 4.7e-75 285.4 260 61.2
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 3.0e-74 282.7 273 56.8
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 9.8e-73 277.7 228 63.6
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 3.7e-72 275.8 198 68.2
Hma1.2p1_0550F.1_g177260 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 4.2e-68 262.3 164 79.9
Nn3g17761 Nelumbo nucifera HOM05D006042 ORTHO05D007658 5.5e-68 261.9 301 51.5
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 1.5e-65 253.8 193 62.7
Cpa.g.sc179.22 Carica papaya HOM05D006042 ORTHO05D007658 6.8e-58 228.4 244 52.0
MELO3C022088.2 Cucumis melo HOM05D006042 ORTHO05D007658 1.5e-57 227.3 200 62.0
Peaxi162Scf00751g00624 Petunia axillaris HOM05D006042 ORTHO05D007658 8.3e-56 221.5 119 88.2
MBI09_g40289_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 5.2e-50 202.2 118 81.4
BcaC02g09662 Brassica carinata HOM05D006042 ORTHO05D007658 2.6e-49 199.9 264 48.5
Cre16.g665250 Chlamydomonas reinhardtii HOM05D006042 ORTHO05D007658 2.2e-48 196.8 201 54.2
PRCOL_00000779 Prasinoderma coloniale HOM05D006042 ORTHO05D007658 1.1e-47 194.5 221 48.0
MCO16G088 Micromonas commoda HOM05D006042 ORTHO05D007658 3.0e-45 186.4 213 48.4
TAR278G0002 Trochodendron aralioides HOM05D006042 ORTHO05D007658 3.9e-45 186.0 183 58.5
GSVIVG01026074001 Vitis vinifera HOM05D006042 ORTHO05D007658 2.1e-43 180.3 121 76.0
BolC3t18613H Brassica oleracea HOM05D006042 ORTHO05D032368 2.7e-38 163.3 97 79.4
C04p45290 Brassica napus HOM05D006042 ORTHO05D007658 1.3e-37 161.0 318 38.1
BolC5t30891H Brassica oleracea HOM05D006042 ORTHO05D007658 1.7e-37 160.6 97 78.4
Haze_14131 Corylus avellana HOM05D006042 ORTHO05D007658 3.0e-37 159.8 181 52.5
BolC4t26112H Brassica oleracea HOM05D006042 ORTHO05D007658 2.6e-33 146.7 226 44.2
unitig_0.g9 Utricularia gibba HOM05D006042 ORTHO05D007658 1.1e-31 141.4 80 81.2
Cpa.g.sc179.23 Carica papaya HOM05D006042 ORTHO05D007658 9.2e-31 138.3 78 82.1
GSVIVG01027526001 Vitis vinifera HOM05D006042 ORTHO05D007658 8.7e-29 131.7 78 79.5
Haze_14130 Corylus avellana HOM05D006042 ORTHO05D007658 3.6e-27 126.3 96 65.6
Sabra17G0093400 Salix brachista HOM05D006042 ORTHO05D007658 1.1e-18 98.2 79 68.4
CARHR262580 Cardamine hirsuta HOM05D006042 ORTHO05D007658 6.9e-18 95.5 161 42.9
QL02p057613 Quercus lobata HOM05D006042 ORTHO05D007658 4.5e-17 92.8 76 64.5
BcaC05g29172 Brassica carinata HOM05D006042 ORTHO05D032368 1.1e-15 88.2 50 82.0
C02p54890 Brassica napus HOM05D006042 ORTHO05D032368 1.4e-15 87.8 51 80.4
Ah.16g101960 Amaranthus hybridus HOM05D000095 ORTHO05D000330 2.1e-14 84.0 45 86.7
Phvul.004G063400 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 3.0e-13 80.1 55 69.1
Peaxi162Scf00104g00074 Petunia axillaris HOM05D006042 ORTHO05D007658 9.6e-12 75.1 47 72.3
Phvul.004G063200 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 2.8e-11 73.6 47 70.2
VMungo0464G0819 Vigna mungo HOM05D006042 ORTHO05D007658 2.9e-08 63.5 47 63.8
unitig_0.g10 Utricularia gibba HOM05D006042 ORTHO05D007658 5.5e-07 59.3 114 34.2
Cpa.g.sc179.24 Carica papaya HOM05D006042 ORTHO05D007658 1.6e-06 57.8 34 73.5


User provided reference genes

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