Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 3.9e-233 811.2 446 100.0
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 1.7e-159 566.6 464 72.6
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 4.6e-117 425.6 328 74.4
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 2.2e-103 380.2 473 50.7
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 3.4e-96 356.3 432 52.1
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 4.2e-94 349.4 469 49.0
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 6.1e-93 345.5 460 50.4
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 1.0e-92 344.7 479 50.3
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 1.3e-92 344.4 479 48.4
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 8.2e-90 335.1 440 49.5
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 1.1e-89 334.7 440 48.2
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 5.9e-88 328.9 479 47.4
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 1.7e-87 327.4 482 45.6
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 1.1e-86 324.7 471 48.4
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 3.2e-86 323.2 460 45.7
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 5.5e-86 322.4 494 45.1
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 7.9e-85 318.5 416 51.2
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 3.0e-84 316.6 460 48.9
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 2.0e-83 313.9 477 44.7
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 1.8e-81 307.4 479 45.9
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 5.3e-81 305.8 454 46.0
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 5.3e-81 305.8 459 45.5
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 5.3e-81 305.8 451 47.5
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 5.3e-81 305.8 450 47.1
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 2.0e-80 303.9 467 45.0
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 2.0e-80 303.9 457 44.9
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 4.5e-80 302.8 459 44.7
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 7.7e-80 302.0 463 44.9
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 7.7e-80 302.0 393 50.9
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.3e-79 301.2 491 43.8
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 1.7e-79 300.8 487 42.7
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 2.2e-79 300.4 480 44.6
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 5.0e-79 299.3 425 47.1
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 2.5e-78 297.0 460 44.1
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 3.2e-78 296.6 465 46.0
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 7.2e-78 295.4 457 44.4
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 6.1e-77 292.4 490 42.4
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 1.8e-76 290.8 470 45.5
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 1.8e-76 290.8 458 42.6
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 1.8e-76 290.8 574 38.9
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 2.0e-75 287.3 487 42.7
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 3.3e-75 286.6 402 49.5
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 3.3e-75 286.6 483 41.2
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 1.4e-73 281.2 449 42.8
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 9.1e-73 278.5 491 41.5
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.6e-72 276.9 458 41.7
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 4.5e-72 276.2 471 44.4
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 5.9e-72 275.8 493 42.6
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 5.0e-71 272.7 467 45.6
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 4.2e-70 269.6 451 42.4
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 1.2e-69 268.1 475 41.3
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 3.6e-69 266.5 493 41.6
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 6.1e-69 265.8 441 47.2
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 8.0e-69 265.4 458 44.5
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 3.9e-68 263.1 442 43.2
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 2.0e-67 260.8 483 39.3
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 1.4e-65 254.6 452 39.6
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 5.3e-65 252.7 471 42.5
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.2e-64 251.5 458 42.4
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.3e-63 248.1 388 43.0
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.7e-63 247.7 378 43.9
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 2.2e-63 247.3 414 42.5
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 2.9e-63 246.9 469 40.3
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 1.1e-62 245.0 440 43.9
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 5.2e-60 236.1 451 37.7
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 2.0e-59 234.2 371 43.4
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 2.6e-59 233.8 467 38.1
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 3.4e-59 233.4 584 33.6
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 1.7e-58 231.1 477 39.2
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 8.3e-58 228.8 438 39.7
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 3.8e-55 219.9 482 36.3
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 6.5e-55 219.2 363 41.0
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 8.3e-50 202.2 330 43.3
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 5.4e-49 199.5 389 37.0
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 1.1e-46 191.8 259 49.0
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 1.9e-46 191.0 310 44.8
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 6.8e-44 182.6 303 42.9
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 8.3e-42 175.6 409 35.2
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 3.2e-41 173.7 237 45.6
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 2.7e-40 170.6 470 35.5
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 1.0e-39 168.7 290 40.7
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 5.0e-39 166.4 197 53.8
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 2.5e-38 164.1 171 56.1
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 4.4e-35 153.3 252 42.9
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 7.5e-35 152.5 534 29.2
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 1.9e-33 147.9 296 36.1
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 2.5e-30 137.5 451 30.6
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 9.5e-30 135.6 109 67.9
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 3.6e-29 133.7 462 30.3
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 5.2e-28 129.8 143 55.2
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 1.4e-25 121.7 176 43.2
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.6e-24 118.2 195 45.1
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 2.1e-21 107.8 187 44.4
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 2.3e-20 104.4 161 42.9
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 5.1e-15 86.7 102 52.9
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 8.1e-13 79.3 354 25.7
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 1.5e-11 75.1 198 30.3
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 7.6e-11 72.8 96 43.8
CBR_g44341 Chara braunii HOM05D007356 ORTHO05D009247 1.7e-07 61.6 92 39.1
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 1.1e-06 58.9 228 26.8
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.5e-06 58.5 100 42.0
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 4.3e-06 57.0 72 48.6
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 4.3e-06 57.0 100 41.0


User provided reference genes

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