Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 1.5e-93 346.3 194 100.0
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 1.2e-82 310.1 194 87.6
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 5.1e-81 304.7 194 82.5
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 2.2e-76 289.3 196 81.1
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 1.5e-75 286.6 191 79.6
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 4.2e-75 285.0 189 81.5
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 9.4e-75 283.9 196 79.6
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 2.1e-74 282.7 191 78.0
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 1.0e-73 280.4 189 79.9
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 1.0e-73 280.4 190 78.4
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 3.0e-73 278.9 191 79.6
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 6.7e-73 277.7 196 76.0
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 8.8e-73 277.3 190 77.9
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 1.1e-72 276.9 190 78.4
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 1.1e-72 276.9 190 78.4
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 1.1e-72 276.9 196 76.0
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 1.1e-72 276.9 196 76.0
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 2.0e-72 276.2 190 77.4
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 2.0e-72 276.2 189 77.2
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 2.6e-72 275.8 190 77.9
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 2.6e-72 275.8 196 75.5
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 3.3e-72 275.4 196 77.6
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 3.3e-72 275.4 190 77.9
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 3.3e-72 275.4 190 77.9
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 3.3e-72 275.4 190 77.9
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 5.7e-72 274.6 189 75.7
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 5.7e-72 274.6 196 77.0
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 9.7e-72 273.9 194 75.3
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 1.3e-71 273.5 190 76.3
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 2.2e-71 272.7 189 77.2
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 2.8e-71 272.3 191 76.4
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 2.8e-71 272.3 190 77.4
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 2.8e-71 272.3 190 76.8
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 2.8e-71 272.3 190 77.4
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 3.7e-71 271.9 190 76.8
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 3.7e-71 271.9 195 77.4
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 8.2e-71 270.8 198 74.2
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 8.2e-71 270.8 194 75.3
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 8.2e-71 270.8 189 75.1
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 1.1e-70 270.4 190 76.3
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 1.1e-70 270.4 190 76.3
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 1.1e-70 270.4 189 76.2
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 1.1e-70 270.4 196 81.1
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 1.1e-70 270.4 196 81.1
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 1.1e-70 270.4 189 76.2
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 1.8e-70 269.6 196 75.5
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 1.8e-70 269.6 189 76.2
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 2.4e-70 269.2 185 76.8
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 3.1e-70 268.9 196 75.0
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 3.1e-70 268.9 194 75.3
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 3.1e-70 268.9 196 80.6
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 3.1e-70 268.9 189 75.7
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 3.1e-70 268.9 190 76.8
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 4.1e-70 268.5 189 75.1
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 5.3e-70 268.1 196 75.0
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 5.3e-70 268.1 189 76.7
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 7.0e-70 267.7 197 75.6
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 7.0e-70 267.7 197 75.6
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 7.0e-70 267.7 189 75.7
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 7.0e-70 267.7 197 79.7
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 7.0e-70 267.7 192 75.0
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 7.0e-70 267.7 189 73.5
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 9.1e-70 267.3 190 75.3
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 9.1e-70 267.3 190 75.3
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 1.2e-69 266.9 189 74.6
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 1.2e-69 266.9 195 74.4
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 1.2e-69 266.9 194 73.7
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 1.2e-69 266.9 197 75.1
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 1.6e-69 266.5 191 75.9
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 2.0e-69 266.2 192 75.0
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 2.7e-69 265.8 190 76.3
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 2.7e-69 265.8 197 75.1
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 3.5e-69 265.4 190 76.3
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 7.7e-69 264.2 192 74.5
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 7.7e-69 264.2 189 74.1
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 1.0e-68 263.8 190 75.8
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 1.0e-68 263.8 190 75.8
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 1.0e-68 263.8 189 74.1
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 1.0e-68 263.8 195 73.8
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 1.3e-68 263.5 196 74.0
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 8.5e-68 260.8 190 75.3
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.9e-67 259.6 184 73.4
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 1.9e-67 259.6 192 74.0
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 4.2e-67 258.5 197 72.6
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 5.5e-67 258.1 196 78.1
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 7.2e-67 257.7 190 74.7
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 9.4e-67 257.3 184 73.4
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 1.2e-66 256.9 197 72.6
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 1.6e-66 256.5 188 71.8
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 2.1e-66 256.1 194 74.7
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 3.6e-66 255.4 189 75.1
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 3.6e-66 255.4 193 70.5
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 6.1e-66 254.6 189 72.5
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 8.8e-65 250.8 184 74.5
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 1.2e-64 250.4 172 75.0
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 1.5e-64 250.0 189 76.7
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 1.1e-62 243.8 176 76.1
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 9.1e-62 240.7 198 66.2
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 1.1e-59 233.8 186 66.1
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 5.5e-59 231.5 188 66.5
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 7.2e-59 231.1 196 64.3
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 7.2e-59 231.1 198 61.6
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 1.6e-58 229.9 194 67.0
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 3.4e-56 222.2 180 63.3
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 4.4e-56 221.9 206 58.3
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 1.4e-54 216.9 185 62.7
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 1.7e-52 209.9 181 61.3
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 1.1e-51 207.2 138 81.9
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 3.3e-51 205.7 172 60.5
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 8.9e-49 197.6 116 87.1
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 2.4e-46 189.5 137 75.2
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 2.4e-46 189.5 158 67.1
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 7.0e-46 188.0 190 62.6
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 7.8e-45 184.5 193 56.5
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 2.9e-39 166.0 190 53.2
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 4.9e-39 165.2 185 56.8
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 6.4e-39 164.9 97 83.5
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 2.0e-37 159.8 119 74.8
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 4.3e-35 152.1 115 71.3
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 4.0e-33 145.6 122 65.6
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 7.8e-29 131.3 165 40.6
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 1.8e-25 120.2 83 71.1
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 1.2e-24 117.5 135 52.6
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 9.2e-22 107.8 76 69.7
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 1.0e-20 104.4 76 67.1
PRCOL_00005630 Prasinoderma coloniale HOM05D005910 ORTHO05D007088 1.1e-19 100.9 164 32.9
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 7.3e-19 98.2 63 76.2
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 3.4e-16 89.4 45 91.1
Cre03.g182900 Chlamydomonas reinhardtii HOM05D005910 ORTHO05D007088 2.9e-15 86.3 161 32.3
Glyma.07G000600 Glycine max HOM05D005910 ORTHO05D007088 2.4e-14 83.2 74 63.5
AUR62043130 Chenopodium quinoa HOM05D005910 ORTHO05D007088 6.0e-13 78.6 57 70.2
HanXRQChr13g0398341 Helianthus annuus HOM05D005910 ORTHO05D007088 2.5e-11 73.2 65 60.0


User provided reference genes

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