Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0438161 Helianthus annuus HOM05D003715 ORTHO05D003958 2.0e-155 552.4 270 100.0
ECA238G2879 Erigeron canadensis HOM05D003715 ORTHO05D003958 1.0e-119 433.7 271 79.0
Lsat_1_v5_gn_2_58261 Lactuca sativa HOM05D003715 ORTHO05D003958 2.1e-88 329.7 238 72.3
HanXRQChr13g0397871 Helianthus annuus HOM05D003715 ORTHO05D003958 6.7e-71 271.6 276 54.0
Lsat_1_v5_gn_6_37461 Lactuca sativa HOM05D003715 ORTHO05D003958 8.2e-69 264.6 268 53.7
ECA233G0839 Erigeron canadensis HOM05D003715 ORTHO05D003958 1.3e-66 257.3 274 52.2
HanXRQChr02g0054571 Helianthus annuus HOM05D003715 ORTHO05D003958 3.6e-64 249.2 285 51.6
QL07p018445 Quercus lobata HOM05D003715 ORTHO05D003958 1.3e-53 214.2 306 48.0
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.3e-53 214.2 300 47.0
Actinidia22080 Actinidia chinensis HOM05D003715 ORTHO05D003958 2.2e-53 213.4 310 45.5
Dinv37021 Davidia involucrata HOM05D003715 ORTHO05D003958 6.3e-53 211.8 277 48.4
Hma1.2p1_0152F.1_g067600 Hydrangea macrophylla HOM05D003715 ORTHO05D003958 6.3e-53 211.8 300 45.7
Manes.08G145000 Manihot esculenta HOM05D003715 ORTHO05D003958 1.7e-50 203.8 289 43.6
Manes.09G140500 Manihot esculenta HOM05D003715 ORTHO05D003958 2.2e-50 203.4 288 43.4
Dinv14575 Davidia involucrata HOM05D003715 ORTHO05D003958 8.5e-50 201.4 305 45.9
Sabra19G0044200 Salix brachista HOM05D003715 ORTHO05D003958 3.6e-48 196.1 310 42.3
Sabra19G0047500 Salix brachista HOM05D003715 ORTHO05D003958 3.6e-48 196.1 310 42.3
Oeu024502.1 Olea europaea HOM05D003715 ORTHO05D003958 8.0e-48 194.9 290 43.1
Cfa001533 Carpinus fangiana HOM05D003715 ORTHO05D003958 1.4e-47 194.1 303 45.9
PGSC0003DMG400008354 Solanum tuberosum HOM05D003715 ORTHO05D003958 4.0e-47 192.6 278 46.0
Potri.019G035600 Populus trichocarpa HOM05D003715 ORTHO05D003958 5.2e-47 192.2 312 40.4
Haze_19430 Corylus avellana HOM05D003715 ORTHO05D003958 4.4e-46 189.1 311 43.4
Oeu035703.1 Olea europaea HOM05D003715 ORTHO05D003958 7.5e-46 188.3 289 41.9
CiPaw.10G001300 Carya illinoinensis HOM05D003715 ORTHO05D003958 1.3e-45 187.6 311 41.5
Sopen10g029220 Solanum pennellii HOM05D003715 ORTHO05D003958 1.3e-45 187.6 283 43.8
Solyc10g078590.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 1.7e-45 187.2 283 43.8
Actinidia30549 Actinidia chinensis HOM05D003715 ORTHO05D003958 4.9e-45 185.7 247 47.8
Eucgr.A02102 Eucalyptus grandis HOM05D003715 ORTHO05D003958 4.9e-45 185.7 311 40.5
PGR142G1981 Punica granatum HOM05D003715 ORTHO05D003958 4.9e-45 185.7 298 43.3
Potri.013G057200 Populus trichocarpa HOM05D003715 ORTHO05D003958 8.3e-45 184.9 310 41.3
Peaxi162Scf00463g00019 Petunia axillaris HOM05D003715 ORTHO05D003958 1.8e-44 183.7 302 41.7
DCAR_019875 Daucus carota HOM05D003715 ORTHO05D003958 3.1e-44 183.0 290 42.8
TWI34G1349 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 7.0e-44 181.8 311 41.2
Nitab4.5_0002769g0040 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.6e-43 180.6 289 44.6
TWI32G0411 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 1.6e-43 180.6 294 42.5
MSTRG.26069 Avicennia marina HOM05D003715 ORTHO05D003958 3.5e-43 179.5 292 40.8
Sabra13G0051000 Salix brachista HOM05D003715 ORTHO05D003958 4.5e-43 179.1 306 41.2
vmacro12564 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 5.0e-42 175.6 302 40.7
Atru.chr2.1400 Acer truncatum HOM05D003715 ORTHO05D003958 7.2e-41 171.8 302 39.7
Gorai.007G262000 Gossypium raimondii HOM05D003715 ORTHO05D003958 8.0e-40 168.3 300 39.7
Ciclev10021362m.g Citrus clementina HOM05D003715 ORTHO05D003958 1.0e-39 167.9 304 38.5
MBI04_g28023_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 1.4e-39 167.5 298 40.6
PGR042G0616 Punica granatum HOM05D003715 ORTHO05D003958 1.4e-39 167.5 283 44.5
VMungo0464G1653 Vigna mungo HOM05D003715 ORTHO05D003958 1.4e-39 167.5 292 39.7
Nitab4.5_0000358g0150 Nicotiana tabacum HOM05D003715 ORTHO05D003958 3.0e-39 166.4 288 41.3
MBI04_g47731_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 4.0e-39 166.0 207 48.8
PSO384G3755 Papaver somniferum HOM05D003715 ORTHO05D003958 8.9e-39 164.9 202 51.0
Lj1g0002462 Lotus japonicus HOM05D003715 ORTHO05D003958 2.0e-38 163.7 273 39.2
PSO339G5928 Papaver somniferum HOM05D003715 ORTHO05D003958 2.0e-38 163.7 204 50.5
Nitab4.5_0000658g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 2.6e-38 163.3 299 38.5
Sc13g0002630 Simmondsia chinensis HOM05D003715 ORTHO05D003958 2.6e-38 163.3 313 34.8
Thecc.05G249800 Theobroma cacao HOM05D003715 ORTHO05D003958 2.6e-38 163.3 298 39.9
TAR633G2492 Trochodendron aralioides HOM05D003715 ORTHO05D003958 2.6e-38 163.3 297 39.4
MBI01_g25640_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 4.4e-38 162.5 319 39.2
Peaxi162Scf00003g04827 Petunia axillaris HOM05D003715 ORTHO05D003958 9.8e-38 161.4 288 42.0
Duzib106G1922 Durio zibethinus HOM05D003715 ORTHO05D003958 1.7e-37 160.6 299 39.1
Gohir.A11G235300 Gossypium hirsutum HOM05D003715 ORTHO05D003958 1.7e-37 160.6 299 38.8
Psat3g088760 Pisum sativum HOM05D003715 ORTHO05D003958 3.7e-37 159.5 276 40.2
MELO3C008806.2 Cucumis melo HOM05D003715 ORTHO05D003958 6.4e-37 158.7 304 38.8
CsaV3_4G013240 Cucumis sativus L. HOM05D003715 ORTHO05D003958 1.8e-36 157.1 304 40.1
Gohir.D11G246200 Gossypium hirsutum HOM05D003715 ORTHO05D003958 1.8e-36 157.1 300 38.7
TPR.G5870 Trifolium pratense HOM05D003715 ORTHO05D003958 1.8e-36 157.1 265 40.0
Aqoxy2G00514 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 3.2e-36 156.4 281 37.4
TAR369G0375 Trochodendron aralioides HOM05D003715 ORTHO05D003958 4.1e-36 156.0 259 41.7
Hund19231 Selenicereus undatus HOM05D003715 ORTHO05D003958 7.0e-36 155.2 294 36.7
Ca_08274_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 9.2e-36 154.8 279 37.3
Phvul.004G080700 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 9.2e-36 154.8 293 38.6
ClCG04G005350 Citrullus lanatus HOM05D003715 ORTHO05D003958 1.6e-35 154.1 300 38.3
Lalb_Chr22g0359081 Lupinus albus HOM05D003715 ORTHO05D003958 2.0e-35 153.7 289 39.8
COL.COLO4_36085 Corchorus olitorius HOM05D003715 ORTHO05D003958 4.6e-35 152.5 292 39.7
Sed0002226 Sechium edule HOM05D003715 ORTHO05D003958 4.6e-35 152.5 304 36.5
Lalb_Chr02g0157161 Lupinus albus HOM05D003715 ORTHO05D003958 2.3e-34 150.2 238 40.3
Prupe.7G006100 Prunus persica HOM05D003715 ORTHO05D003958 2.9e-34 149.8 314 34.1
Sed0021221 Sechium edule HOM05D003715 ORTHO05D003958 2.9e-34 149.8 280 37.9
Glyma.02G072500 Glycine max HOM05D003715 ORTHO05D003958 5.0e-34 149.1 302 36.8
Lj1g0012553 Lotus japonicus HOM05D003715 ORTHO05D003958 6.6e-34 148.7 288 35.4
Glyma.19G112800 Glycine max HOM05D003715 ORTHO05D003958 1.5e-33 147.5 296 34.5
Ca_04486_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 1.9e-33 147.1 279 35.8
Glyma.16G153700 Glycine max HOM05D003715 ORTHO05D003958 1.9e-33 147.1 301 35.9
Medtr7g085790 Medicago truncatula HOM05D003715 ORTHO05D003958 4.3e-33 146.0 274 38.3
RcHm_v2.0_Chr3g0497011 Rosa chinensis HOM05D003715 ORTHO05D003958 4.3e-33 146.0 317 37.5
vmacro09135 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 9.5e-33 144.8 241 41.1
EL10Ac3g06828 Beta vulgaris HOM05D003715 ORTHO05D003958 2.1e-32 143.7 295 34.9
CANSAT78G1806 Cannabis sativa HOM05D003715 ORTHO05D003958 2.1e-32 143.7 311 37.6
PSO781G0019 Papaver somniferum HOM05D003715 ORTHO05D003958 3.6e-32 142.9 204 46.6
TPR.G9142 Trifolium pratense HOM05D003715 ORTHO05D003958 6.2e-32 142.1 280 35.4
CiPaw.09G002400 Carya illinoinensis HOM05D003715 ORTHO05D003958 1.0e-31 141.4 261 40.2
Glyma.16G040300 Glycine max HOM05D003715 ORTHO05D003958 1.0e-31 141.4 296 34.8
Psat1g091040 Pisum sativum HOM05D003715 ORTHO05D003958 1.8e-31 140.6 189 43.9
Nitab4.5_0000394g0140 Nicotiana tabacum HOM05D003715 ORTHO05D003958 4.0e-31 139.4 287 38.0
MD12G1005100 Malus domestica HOM05D003715 ORTHO05D003958 8.9e-31 138.3 309 37.5
Medtr6g029250 Medicago truncatula HOM05D003715 ORTHO05D003958 8.9e-31 138.3 189 43.4
SGA_v2.0_scaffold94G28404 Striga asiatica HOM05D003715 ORTHO05D003958 8.9e-31 138.3 278 37.1
MD14G1003600 Malus domestica HOM05D003715 ORTHO05D003958 1.2e-30 137.9 316 35.8
Phvul.001G111500 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 1.2e-30 137.9 296 34.5
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 1.5e-30 137.5 266 36.5
Nn2g12054 Nelumbo nucifera HOM05D003715 ORTHO05D003958 4.9e-29 132.5 286 37.4
FvH4_1g28230 Fragaria vesca HOM05D003715 ORTHO05D003958 1.9e-28 130.6 295 35.6
Nn7g35866 Nelumbo nucifera HOM05D003715 ORTHO05D003958 3.2e-28 129.8 269 34.9
Rhsim04G0091400 Rhododendron simsii HOM05D006013 ORTHO05D007383 5.4e-28 129.0 249 38.2
Cpa.g.sc51.130 Carica papaya HOM05D003715 ORTHO05D003958 1.2e-27 127.9 314 33.4
FAN23G0877 Fragaria x ananassa HOM05D003715 ORTHO05D003958 2.7e-27 126.7 293 34.8
FAN26G1768 Fragaria x ananassa HOM05D003715 ORTHO05D003958 2.7e-27 126.7 293 35.2
Cc06_g23060 Coffea canephora HOM05D003715 ORTHO05D003958 4.6e-27 125.9 169 45.0
Actinidia38611 Actinidia chinensis HOM05D003715 ORTHO05D003958 7.8e-27 125.2 271 38.7
arahy.Tifrunner.gnm1.ann1.V3MY1S Arachis hypogaea HOM05D003715 ORTHO05D003958 7.8e-27 125.2 276 34.4
BcaB01g05177 Brassica carinata HOM05D003715 ORTHO05D003958 1.0e-26 124.8 290 33.1
C03p10110 Brassica napus HOM05D003715 ORTHO05D003958 1.0e-26 124.8 290 33.1
BolC3t13497H Brassica oleracea HOM05D003715 ORTHO05D003958 1.0e-26 124.8 290 33.1
BraA03t10190Z Brassica rapa HOM05D003715 ORTHO05D003958 1.0e-26 124.8 290 33.1
SalBow1G3164 Salvia bowleyana HOM05D003715 ORTHO05D003958 1.3e-26 124.4 269 35.7
VMungo1383G2890 Vigna mungo HOM05D003715 ORTHO05D003958 2.3e-26 123.6 292 31.2
THA.LOC104820776 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 3.0e-26 123.2 293 34.5
FAN28G3019 Fragaria x ananassa HOM05D003715 ORTHO05D003958 5.0e-26 122.5 295 34.9
Nitab4.5_0009367g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 6.6e-26 122.1 277 36.5
Sp6g26180 Schrenkiella parvula HOM05D003715 ORTHO05D003958 6.6e-26 122.1 298 34.9
Lalb_Chr14g0364551 Lupinus albus HOM05D003715 ORTHO05D003958 8.6e-26 121.7 269 33.5
BraA02t05434Z Brassica rapa HOM05D003715 ORTHO05D003958 2.5e-25 120.2 296 34.5
BolC2t06880H Brassica oleracea HOM05D003715 ORTHO05D003958 4.3e-25 119.4 293 33.1
C02p09710 Brassica napus HOM05D003715 ORTHO05D003958 5.6e-25 119.0 293 33.1
Aqoxy1G00472 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 9.5e-25 118.2 196 41.3
C09p58840 Brassica napus HOM05D003715 ORTHO05D003958 9.5e-25 118.2 296 31.8
BcaNung05741 Brassica carinata HOM05D003715 ORTHO05D003958 2.1e-24 117.1 262 35.9
A05p43520 Brassica napus HOM05D003715 ORTHO05D003958 2.1e-24 117.1 266 35.7
Nitab4.5_0001079g0120 Nicotiana tabacum HOM05D003715 ORTHO05D003958 2.1e-24 117.1 280 35.0
A10p21370 Brassica napus HOM05D003715 ORTHO05D003958 2.8e-24 116.7 296 32.1
Duzib128G0041 Durio zibethinus HOM05D003715 ORTHO05D003958 3.6e-24 116.3 286 34.3
Thhalv10021350m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 3.6e-24 116.3 263 35.0
Thhalv10014292m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 4.7e-24 115.9 304 35.2
AT5G18130 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 6.2e-24 115.5 296 34.1
BolC9t58728H Brassica oleracea HOM05D003715 ORTHO05D003958 8.1e-24 115.2 282 31.9
AL3G13760 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 1.1e-23 114.8 273 34.1
AT3G03870 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 1.4e-23 114.4 271 35.4
CARHR194940 Cardamine hirsuta HOM05D003715 ORTHO05D003958 1.4e-23 114.4 298 31.5
AL6G29330 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 2.3e-23 113.6 303 32.3
BcaC03g13579 Brassica carinata HOM05D003715 ORTHO05D003958 3.1e-23 113.2 293 32.1
BcaC05g30247 Brassica carinata HOM05D003715 ORTHO05D003958 3.1e-23 113.2 221 38.5
Carub.0006s1642 Capsella rubella HOM05D003715 ORTHO05D003958 4.0e-23 112.8 291 34.7
CARHR077990 Cardamine hirsuta HOM05D003715 ORTHO05D003958 4.0e-23 112.8 259 34.0
BcaC05g29901 Brassica carinata HOM05D003715 ORTHO05D003958 6.8e-23 112.1 260 33.8
BolC5t34973H Brassica oleracea HOM05D003715 ORTHO05D003958 6.8e-23 112.1 260 33.8
BraA10t44200Z Brassica rapa HOM05D003715 ORTHO05D003958 6.8e-23 112.1 281 31.7
Carub.0003s0306 Capsella rubella HOM05D003715 ORTHO05D003958 1.5e-22 110.9 225 38.2
A02p04750 Brassica napus HOM05D003715 ORTHO05D003958 2.0e-22 110.5 296 32.4
BraA05t23092Z Brassica rapa HOM05D003715 ORTHO05D003958 2.6e-22 110.2 282 33.7
MBI04_g37012_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.4e-22 109.8 184 42.4
BcaB08g36703 Brassica carinata HOM05D003715 ORTHO05D003958 7.5e-22 108.6 257 33.5
arahy.Tifrunner.gnm1.ann1.KTU7AY Arachis hypogaea HOM05D003715 ORTHO05D003958 1.3e-21 107.8 166 44.0
Eucgr.K01502 Eucalyptus grandis HOM05D003715 ORTHO05D003958 1.3e-21 107.8 286 32.9
Sp3g02840 Schrenkiella parvula HOM05D003715 ORTHO05D003958 2.2e-21 107.1 270 35.9
BcaB05g23302 Brassica carinata HOM05D003715 ORTHO05D003958 2.9e-21 106.7 305 30.5
A03p08670 Brassica napus HOM05D003715 ORTHO05D003958 1.9e-20 104.0 291 32.3
BolC1t05801H Brassica oleracea HOM05D003715 ORTHO05D003958 1.9e-20 104.0 268 34.3
BcaB01g06399 Brassica carinata HOM05D003715 ORTHO05D003958 5.4e-20 102.4 289 30.4
AUR62032043 Chenopodium quinoa HOM05D003715 ORTHO05D003958 1.6e-19 100.9 285 31.2
CSS0027479 Camellia sinensis var. sinensis HOM05D003715 ORTHO05D003958 3.5e-19 99.8 92 57.6
Aa31LG11G11470 Aethionema arabicum HOM05D003715 ORTHO05D003958 1.3e-18 97.8 175 36.6
Ah.04g153150 Amaranthus hybridus HOM05D003715 ORTHO05D003958 1.7e-18 97.4 286 31.5
ATR0737G080 Amborella trichopoda HOM05D003715 ORTHO05D003958 1.7e-18 97.4 194 35.6
PSO384G3057 Papaver somniferum HOM05D003715 ORTHO05D003958 1.7e-18 97.4 142 42.3
Solyc10g080670.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 3.0e-18 96.7 273 32.6
PGSC0003DMG400023700 Solanum tuberosum HOM05D003715 ORTHO05D003958 6.6e-18 95.5 276 31.9
Sopen10g031210 Solanum pennellii HOM05D003715 ORTHO05D003958 8.6e-18 95.1 273 32.6
CDE02G4343 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 1.1e-17 94.7 281 33.1
Aa31LG5G14450 Aethionema arabicum HOM05D003715 ORTHO05D003958 1.9e-17 94.0 168 38.1
THA.LOC104802870 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 5.6e-17 92.4 256 33.6
AUR62032710 Chenopodium quinoa HOM05D003715 ORTHO05D003958 7.3e-17 92.0 282 30.5
FAN19G0160 Fragaria x ananassa HOM05D003715 ORTHO05D003958 7.3e-17 92.0 269 31.2
Os03g0806600 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 9.5e-17 91.7 120 40.8
PSO782G0808 Papaver somniferum HOM05D003715 ORTHO05D003958 4.7e-16 89.4 129 43.4
BcaC05g30288 Brassica carinata HOM05D003715 ORTHO05D003958 1.5e-14 84.3 221 33.5
Duzib106G0556 Durio zibethinus HOM05D003715 ORTHO05D003958 2.0e-14 84.0 230 32.6
arahy.Tifrunner.gnm1.ann1.FCYU2S Arachis hypogaea HOM05D003715 ORTHO05D003958 2.6e-14 83.6 164 40.9
CDE05G3048 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 3.4e-14 83.2 277 30.7
Zm00001eb302900 Zea mays HOM05D003715 ORTHO05D003958 2.2e-13 80.5 95 45.3
unitig_0.g211 Utricularia gibba HOM05D003715 ORTHO05D003958 3.7e-13 79.7 169 33.7
Peaxi162Scf00249g00717 Petunia axillaris HOM05D003715 ORTHO05D003958 4.9e-13 79.3 274 29.9
TAR633G2325 Trochodendron aralioides HOM05D003715 ORTHO05D003958 6.4e-13 79.0 150 39.3
THA.LOC104827275 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 1.1e-12 78.2 186 34.4
HPP92_014229 Vanilla planifolia HOM05D035551 ORTHO05D003958 2.7e-11 73.6 185 35.1
Os07g0204100 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 6.0e-11 72.4 93 47.3
VMungo1383G0996 Vigna mungo HOM05D002467 ORTHO05D013374 3.9e-10 69.7 63 52.4
CDE02G1486 Ceratophyllum demersum HOM05D002360 ORTHO05D006297 1.4e-07 61.2 119 37.0
SEGI_20586 Sequoiadendron giganteum HOM05D003715 ORTHO05D003958 1.2e-06 58.2 128 32.8
Gohir.D11G314650 Gossypium hirsutum HOM05D036646 ORTHO05D047613 5.8e-06 55.8 229 27.5
Zm00001eb160920 Zea mays HOM05D015210 ORTHO05D003958 5.8e-06 55.8 64 46.9
Zm00001eb160930 Zea mays HOM05D015210 ORTHO05D003958 9.9e-06 55.1 84 38.1


User provided reference genes

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