Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0437281 Helianthus annuus HOM05D006195 ORTHO05D007710 1.9e-250 868.6 418 100.0
Lsat_1_v5_gn_7_19641 Lactuca sativa HOM05D006195 ORTHO05D007710 1.0e-219 766.5 413 88.1
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 6.7e-203 710.7 384 88.3
Lj2A280G38 Lonicera japonica HOM05D006195 ORTHO05D007710 1.1e-184 650.2 445 71.7
QL04p018330 Quercus lobata HOM05D006195 ORTHO05D007710 8.5e-182 640.6 407 74.9
Actinidia24060 Actinidia chinensis HOM05D006195 ORTHO05D007710 1.5e-181 639.8 399 75.9
CiPaw.09G158100 Carya illinoinensis HOM05D006195 ORTHO05D007710 1.5e-178 629.8 415 71.3
Atru.chr10.2006 Acer truncatum HOM05D006195 ORTHO05D007710 3.4e-178 628.6 415 72.8
Gorai.009G173800 Gossypium raimondii HOM05D006195 ORTHO05D007710 9.8e-178 627.1 388 75.0
Rhsim02G0120000 Rhododendron simsii HOM05D006195 ORTHO05D007710 1.3e-177 626.7 406 72.9
Eucgr.E03701 Eucalyptus grandis HOM05D006195 ORTHO05D007710 1.7e-177 626.3 386 74.1
Gohir.D05G168600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 1.7e-177 626.3 388 75.0
Gohir.A05G165600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 2.2e-177 625.9 388 74.7
EL10Ac8g20527 Beta vulgaris HOM05D006195 ORTHO05D007710 6.3e-177 624.4 399 73.4
Thecc.06G199000 Theobroma cacao HOM05D006195 ORTHO05D007710 1.1e-176 623.6 389 74.3
MD10G1303200 Malus domestica HOM05D006195 ORTHO05D007710 2.4e-176 622.5 410 72.9
Solyc02g079110.3 Solanum lycopersicum HOM05D006195 ORTHO05D007710 5.4e-176 621.3 392 75.8
GSVIVG01003194001 Vitis vinifera HOM05D006195 ORTHO05D007710 5.4e-176 621.3 386 75.4
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 7.0e-176 620.9 390 75.1
Oeu038214.1 Olea europaea HOM05D006195 ORTHO05D007710 7.0e-176 620.9 390 75.1
Sopen02g023920 Solanum pennellii HOM05D006195 ORTHO05D007710 1.2e-175 620.2 386 76.9
vmacro15867 Vaccinium macrocarpon HOM05D006195 ORTHO05D007710 4.5e-175 618.2 392 75.0
SGA_v2.0_scaffold7G03951 Striga asiatica HOM05D006195 ORTHO05D007710 2.2e-174 615.9 381 76.6
CsaV3_1G011800 Cucumis sativus L. HOM05D006195 ORTHO05D007710 2.9e-174 615.5 388 73.5
TWI38G0511 Tripterygium wilfordii HOM05D006195 ORTHO05D007710 3.8e-174 615.1 417 70.5
Aqoxy1G02740 Aquilegia oxysepala HOM05D006195 ORTHO05D007710 8.5e-174 614.0 386 75.4
Potri.011G043000 Populus trichocarpa HOM05D006195 ORTHO05D007710 8.5e-174 614.0 415 72.0
Prupe.4G036600 Prunus persica HOM05D006195 ORTHO05D007710 1.1e-173 613.6 416 71.2
PGSC0003DMG400022408 Solanum tuberosum HOM05D006195 ORTHO05D007710 1.5e-173 613.2 393 74.6
PSO675G1294 Papaver somniferum HOM05D006195 ORTHO05D007710 2.5e-173 612.5 413 71.2
RcHm_v2.0_Chr5g0006371 Rosa chinensis HOM05D006195 ORTHO05D007710 2.5e-173 612.5 392 74.7
Nitab4.5_0009994g0040 Nicotiana tabacum HOM05D006195 ORTHO05D007710 3.2e-173 612.1 431 70.3
Ciclev10015313m.g Citrus clementina HOM05D006195 ORTHO05D007710 5.5e-173 611.3 415 69.4
PGR042G1193 Punica granatum HOM05D006195 ORTHO05D007710 5.5e-173 611.3 387 73.4
ClCG03G005530 Citrullus lanatus HOM05D006195 ORTHO05D007710 9.5e-173 610.5 395 73.2
Cc02_g12450 Coffea canephora HOM05D006195 ORTHO05D007710 9.5e-173 610.5 413 70.2
Sed0022279 Sechium edule HOM05D006195 ORTHO05D007710 9.5e-173 610.5 391 72.4
Sc17g0006620 Simmondsia chinensis HOM05D006195 ORTHO05D007710 1.2e-172 610.1 406 70.7
Peaxi162Scf00355g00914 Petunia axillaris HOM05D006195 ORTHO05D007710 4.7e-172 608.2 432 69.4
TAR629G3096 Trochodendron aralioides HOM05D006195 ORTHO05D007710 8.0e-172 607.4 382 74.3
Cpa.g.sc27.120 Carica papaya HOM05D006195 ORTHO05D007710 1.8e-171 606.3 410 71.2
CANSAT56G3748 Cannabis sativa HOM05D006195 ORTHO05D007710 3.0e-171 605.5 415 69.9
FvH4_3g04030 Fragaria vesca HOM05D006195 ORTHO05D007710 2.6e-170 602.4 382 75.1
MSTRG.8639 Avicennia marina HOM05D006195 ORTHO05D007710 1.7e-169 599.7 398 72.1
THA.LOC104806275 Tarenaya hassleriana HOM05D006195 ORTHO05D007710 1.7e-169 599.7 390 71.8
Migut.M01211 Erythranthe guttata HOM05D006195 ORTHO05D007710 2.2e-169 599.4 387 73.9
MD05G1325300 Malus domestica HOM05D006195 ORTHO05D007710 2.2e-169 599.4 392 73.0
Migut.I00196 Erythranthe guttata HOM05D006195 ORTHO05D007710 2.8e-169 599.0 388 74.5
arahy.Tifrunner.gnm1.ann1.HDHM3Z Arachis hypogaea HOM05D006195 ORTHO05D007710 8.3e-169 597.4 385 73.8
arahy.Tifrunner.gnm1.ann1.IWY5CJ Arachis hypogaea HOM05D006195 ORTHO05D007710 1.4e-168 596.7 403 70.7
Haze_06571 Corylus avellana HOM05D006195 ORTHO05D007710 1.8e-168 596.3 370 74.9
Cfa000355 Carpinus fangiana HOM05D006195 ORTHO05D007710 5.4e-168 594.7 413 69.2
SalBow8G2471 Salvia bowleyana HOM05D006195 ORTHO05D007710 7.0e-168 594.3 384 73.4
Carub.0007s1990 Capsella rubella HOM05D006195 ORTHO05D007710 9.2e-168 594.0 388 71.1
BcaNung02791 Brassica carinata HOM05D006195 ORTHO05D007710 1.2e-167 593.6 406 69.2
CARHR228180 Cardamine hirsuta HOM05D006195 ORTHO05D007710 2.0e-167 592.8 389 71.2
FAN11G1039 Fragaria x ananassa HOM05D006195 ORTHO05D007710 2.0e-167 592.8 384 73.4
AT4G21520 Arabidopsis thaliana HOM05D006195 ORTHO05D007710 2.7e-167 592.4 410 68.3
Ca_18483_v3 Cicer arietinum L. HOM05D006195 ORTHO05D007710 3.5e-167 592.0 414 69.1
Thhalv10025271m.g Eutrema salsugineum HOM05D006195 ORTHO05D007710 7.7e-167 590.9 405 68.9
AL7G32530 Arabidopsis lyrata HOM05D006195 ORTHO05D007710 5.0e-166 588.2 410 67.8
Sp7g19630 Schrenkiella parvula HOM05D006195 ORTHO05D007710 8.6e-166 587.4 381 71.4
C01p15450 Brassica napus HOM05D006195 ORTHO05D007710 1.1e-165 587.0 397 69.8
BolC1t01499H Brassica oleracea HOM05D006195 ORTHO05D007710 1.1e-165 587.0 397 69.8
A01p12830 Brassica napus HOM05D006195 ORTHO05D007710 1.9e-165 586.3 386 71.0
Manes.17G039200 Manihot esculenta HOM05D006195 ORTHO05D007710 4.3e-165 585.1 372 73.9
Lalb_Chr09g0327371 Lupinus albus HOM05D006195 ORTHO05D007710 5.6e-165 584.7 386 71.5
Medtr4g091080 Medicago truncatula HOM05D006195 ORTHO05D007710 7.3e-165 584.3 389 71.2
BraA01t01227Z Brassica rapa HOM05D006195 ORTHO05D007710 1.2e-164 583.6 387 70.5
Aa31LG6G3540 Aethionema arabicum HOM05D006195 ORTHO05D007710 3.6e-164 582.0 385 70.6
MBI14_g15641_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 3.6e-164 582.0 391 71.1
Phvul.002G222200 Phaseolus vulgaris HOM05D006195 ORTHO05D007710 2.0e-162 576.2 402 69.2
VMungo0251G2515 Vigna mungo HOM05D006195 ORTHO05D007710 3.2e-160 568.9 388 70.6
DCAR_008069 Daucus carota HOM05D006195 ORTHO05D007710 7.0e-160 567.8 410 67.6
Duzib235G1322 Durio zibethinus HOM05D006195 ORTHO05D007710 2.0e-159 566.2 388 69.6
Glyma.07G190200 Glycine max HOM05D006195 ORTHO05D007710 5.9e-159 564.7 384 70.3
ATR0693G097 Amborella trichopoda HOM05D006195 ORTHO05D007710 1.0e-158 563.9 428 65.0
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 3.0e-158 562.4 381 70.1
CSS0049192 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 1.6e-156 556.6 378 70.9
FAN25G3765 Fragaria x ananassa HOM05D006195 ORTHO05D007710 2.8e-156 555.8 423 66.7
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 3.6e-156 555.4 367 73.8
Os03g0738000 Oryza sativa ssp. japonica HOM05D006195 ORTHO05D007710 8.0e-156 554.3 382 69.6
Lj4g0017156 Lotus japonicus HOM05D006195 ORTHO05D007710 3.1e-155 552.4 385 68.8
MELO3C002557.2 Cucumis melo HOM05D006195 ORTHO05D007710 2.2e-153 546.2 391 67.8
Ah.14g088920 Amaranthus hybridus HOM05D006195 ORTHO05D007710 2.7e-151 539.3 406 64.8
FAN21G3429 Fragaria x ananassa HOM05D006195 ORTHO05D007710 4.3e-149 531.9 393 66.9
AUR62014719 Chenopodium quinoa HOM05D006195 ORTHO05D007710 4.4e-146 521.9 414 63.5
Zm00001eb056530 Zea mays HOM05D006195 ORTHO05D007710 3.2e-144 515.8 390 65.4
CDE11G0466 Ceratophyllum demersum HOM05D006195 ORTHO05D007710 7.6e-138 494.6 367 66.2
Pp3c6_22670 Physcomitrium patens HOM05D006195 ORTHO05D007710 6.4e-137 491.5 409 59.4
AUR62016899 Chenopodium quinoa HOM05D006195 ORTHO05D007710 4.1e-136 488.8 379 63.3
Mapoly0082s0056 Marchantia polymorpha HOM05D006195 ORTHO05D007710 1.2e-135 487.3 406 57.1
AagrBONN_evm.TU.Sc2ySwM_344.4192 Anthoceros agrestis HOM05D006195 ORTHO05D007710 4.7e-132 475.3 408 57.1
Nitab4.5_0000190g0110 Nicotiana tabacum HOM05D006195 ORTHO05D007710 4.0e-131 472.2 323 71.5
Hund23609 Selenicereus undatus HOM05D006195 ORTHO05D007710 4.2e-128 462.2 325 68.3
SMO137G0351 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 1.3e-124 450.7 371 57.1
Dinv40483 Davidia involucrata HOM05D006195 ORTHO05D007710 1.4e-123 447.2 270 77.4
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 6.9e-123 444.9 409 57.9
MBI14_g13652_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 1.5e-122 443.7 403 59.3
Psat7g108560 Pisum sativum HOM05D006195 ORTHO05D007710 7.4e-117 424.9 282 70.6
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 5.8e-114 415.2 384 53.4
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 7.1e-112 408.3 343 56.0
Eucgr.L01396 Eucalyptus grandis HOM05D006195 ORTHO05D007710 2.7e-95 353.2 232 69.4
Potri.004G034600 Populus trichocarpa HOM05D006195 ORTHO05D007710 3.8e-89 332.8 245 64.5
SMO116G0485 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 4.6e-87 325.9 278 55.4
Cre07.g326350 Chlamydomonas reinhardtii HOM05D006195 ORTHO05D007710 2.0e-85 320.5 397 43.6
SalBow6G2099 Salvia bowleyana HOM05D006195 ORTHO05D007710 3.8e-81 306.2 167 85.6
SalBow6G4337 Salvia bowleyana HOM05D006195 ORTHO05D007710 3.8e-81 306.2 167 85.6
TPR.G37128 Trifolium pratense HOM05D006195 ORTHO05D007710 5.5e-80 302.4 179 77.1
Nn1g03899 Nelumbo nucifera HOM05D006195 ORTHO05D007710 7.2e-80 302.0 456 42.8
MCO07G204 Micromonas commoda HOM05D006195 ORTHO05D007710 9.7e-77 291.6 391 41.2
HPP92_018057 Vanilla planifolia HOM05D006195 ORTHO05D007710 1.4e-75 287.7 276 52.9
SalBow1G5137 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.8e-68 263.5 146 84.2
GSVIVG01003189001 Vitis vinifera HOM05D006195 ORTHO05D007710 1.5e-53 214.5 142 72.5
Manes.10G084901 Manihot esculenta HOM05D006195 ORTHO05D007710 1.6e-50 204.5 127 78.7
Dinv18994 Davidia involucrata HOM05D006195 ORTHO05D007710 1.5e-48 198.0 204 52.0
SalBow4G2205 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.6e-47 194.5 99 90.9
SHI02125 Sapria himalayana HOM05D006195 ORTHO05D007710 1.0e-41 175.3 101 76.2
SalBow1G7985 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.1e-40 171.8 115 73.9
PRCOL_00004057 Prasinoderma coloniale HOM05D006195 ORTHO05D007710 3.6e-39 166.8 379 30.9
Nitab4.5_0003834g0010 Nicotiana tabacum HOM05D006195 ORTHO05D007710 1.2e-37 161.8 93 80.6
CSS0050458 Camellia sinensis var. sinensis HOM05D000911 ORTHO05D007710 4.9e-36 156.4 89 78.7
Thecc.06G199100 Theobroma cacao HOM05D006195 ORTHO05D007710 2.4e-35 154.1 101 74.3
SHI48938 Sapria himalayana HOM05D006195 ORTHO05D007710 1.4e-30 138.3 102 65.7
SEGI_17138 Sequoiadendron giganteum HOM05D006195 ORTHO05D007710 2.0e-29 134.4 80 70.0
HPP92_018063 Vanilla planifolia HOM05D006195 ORTHO05D007710 4.4e-21 106.7 135 45.9
SHI02124 Sapria himalayana HOM05D006195 ORTHO05D007710 3.5e-18 97.1 216 34.3
AL117U10020 Arabidopsis lyrata HOM05D064442 ORTHO05D011622 4.3e-16 90.1 66 62.1
AagrBONN_evm.TU.Sc2ySwM_228.3731 Anthoceros agrestis HOM05D002999 ORTHO05D003137 3.3e-08 63.9 346 22.8
HanXRQChr09g0256871 Helianthus annuus HOM05D002999 ORTHO05D003137 4.3e-08 63.5 349 22.9
HanXRQChr15g0466521 Helianthus annuus HOM05D002999 ORTHO05D003137 1.3e-07 62.0 349 22.9
AUR62043984 Chenopodium quinoa HOM05D002999 ORTHO05D003137 1.6e-07 61.6 221 26.2
HanXRQChr00c0537g0575611 Helianthus annuus HOM05D002999 ORTHO05D003137 1.6e-07 61.6 238 24.4
Nitab4.5_0004238g0040 Nicotiana tabacum HOM05D002999 ORTHO05D003137 2.1e-07 61.2 217 24.0
Hma1.2p1_0643F.1_g194600 Hydrangea macrophylla HOM05D002999 ORTHO05D003137 8.1e-07 59.3 247 23.5
Pp3c2_19830 Physcomitrium patens HOM05D002999 ORTHO05D003137 8.1e-07 59.3 252 24.2
Haze_27091 Corylus avellana HOM05D002999 ORTHO05D003137 1.1e-06 58.9 358 24.6
Potri.014G136000 Populus trichocarpa HOM05D002999 ORTHO05D003137 1.4e-06 58.5 247 23.5
AagrBONN_evm.TU.Sc2ySwM_362.297 Anthoceros agrestis HOM05D002999 ORTHO05D003137 1.8e-06 58.2 351 20.8
Pp3c10_3720 Physcomitrium patens HOM05D002999 ORTHO05D003137 2.4e-06 57.8 272 22.4
ECA247G2129 Erigeron canadensis HOM05D002999 ORTHO05D003137 4.0e-06 57.0 247 23.5
Aqoxy2G03169 Aquilegia oxysepala HOM05D002999 ORTHO05D003137 5.3e-06 56.6 358 22.3
Migut.M00121 Erythranthe guttata HOM05D001610 ORTHO05D001585 6.9e-06 56.2 228 26.3
Zm00001eb354420 Zea mays HOM05D002999 ORTHO05D003137 6.9e-06 56.2 267 22.5
Sabra14G0102500 Salix brachista HOM05D002999 ORTHO05D003137 9.0e-06 55.8 150 28.7


User provided reference genes

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