Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 1.1e-170 603.2 310 100.0
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 3.9e-139 498.4 318 82.7
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 2.8e-137 492.3 314 83.1
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 1.6e-100 370.2 286 69.6
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 1.6e-100 370.2 247 76.5
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 1.0e-99 367.5 247 74.9
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 1.8e-99 366.7 310 66.5
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 3.0e-99 365.9 246 74.0
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 1.5e-98 363.6 272 71.7
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 5.7e-98 361.7 226 80.5
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 2.2e-97 359.8 318 62.3
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 2.2e-97 359.8 296 64.5
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 2.8e-97 359.4 241 76.8
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 4.8e-97 358.6 218 79.4
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 4.8e-97 358.6 286 68.9
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 6.3e-97 358.2 306 65.4
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 1.4e-96 357.1 219 81.7
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 2.4e-96 356.3 216 80.1
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 2.4e-96 356.3 292 64.0
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 4.1e-96 355.5 256 71.5
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.2e-95 354.0 302 65.2
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 1.2e-95 354.0 285 67.0
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 1.5e-95 353.6 244 73.0
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 2.6e-95 352.8 264 70.1
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 3.4e-95 352.4 218 78.0
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 4.5e-95 352.1 207 83.6
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 4.5e-95 352.1 287 67.9
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 4.5e-95 352.1 277 69.0
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 5.9e-95 351.7 284 68.0
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 7.7e-95 351.3 289 65.7
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.3e-94 350.5 218 77.5
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 1.3e-94 350.5 218 77.5
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 1.7e-94 350.1 300 63.7
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 3.8e-94 349.0 284 67.6
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 5.0e-94 348.6 243 73.3
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 1.1e-93 347.4 294 66.0
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 1.1e-93 347.4 247 69.2
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 1.4e-93 347.1 212 79.7
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 1.4e-93 347.1 262 67.2
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 1.9e-93 346.7 292 66.4
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 7.2e-93 344.7 258 68.6
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 7.2e-93 344.7 233 73.4
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.2e-92 344.0 296 64.9
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.6e-92 343.6 297 65.3
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 7.9e-92 341.3 284 63.4
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 1.0e-91 340.9 247 70.0
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 1.1e-90 337.4 302 60.6
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 4.4e-90 335.5 250 67.2
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 5.7e-90 335.1 254 67.7
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 9.7e-90 334.3 221 72.4
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 1.3e-89 334.0 219 73.1
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 1.3e-89 334.0 254 67.3
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 1.3e-89 334.0 262 65.3
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 2.8e-89 332.8 301 61.1
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 2.8e-89 332.8 253 66.4
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 2.8e-89 332.8 301 60.1
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 3.7e-89 332.4 260 65.8
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 3.7e-89 332.4 255 66.3
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 4.8e-89 332.0 294 61.9
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 1.8e-88 330.1 297 62.3
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 1.8e-88 330.1 297 62.3
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 4.1e-88 328.9 300 60.0
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 5.3e-88 328.6 304 59.5
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 9.1e-88 327.8 240 70.4
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 1.5e-87 327.0 210 76.2
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 1.5e-87 327.0 260 65.4
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 2.0e-87 326.6 300 61.0
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 2.6e-87 326.2 297 61.6
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 7.7e-87 324.7 244 68.0
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 7.7e-87 324.7 250 67.6
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 1.0e-86 324.3 204 77.5
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 1.0e-86 324.3 283 62.5
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 2.2e-86 323.2 306 61.8
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 3.8e-86 322.4 201 77.1
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 1.1e-85 320.9 302 58.9
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 8.0e-84 314.7 303 59.4
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 8.0e-84 314.7 268 62.3
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 8.2e-81 304.7 303 59.1
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 1.8e-80 303.5 278 59.0
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 2.6e-79 299.7 199 74.9
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.3e-78 297.4 310 53.9
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 5.0e-78 295.4 220 69.1
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 1.2e-76 290.8 206 68.4
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.4e-75 287.3 183 74.9
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 2.6e-74 283.1 206 66.0
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.7e-73 280.4 199 69.3
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 2.2e-73 280.0 220 64.1
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 3.7e-73 279.3 212 63.7
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 1.7e-70 270.4 272 55.9
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 2.9e-70 269.6 254 61.0
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 1.9e-69 266.9 274 58.0
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 3.2e-69 266.2 172 75.0
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 8.0e-68 261.5 180 71.7
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 4.4e-66 255.8 233 62.7
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 3.1e-64 249.6 258 52.7
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 6.3e-57 225.3 177 64.4
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 8.3e-57 224.9 233 54.9
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.1e-56 224.6 156 72.4
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 1.2e-52 211.1 197 55.3
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 3.1e-43 179.9 151 62.9
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 9.8e-42 174.9 197 45.2
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 3.2e-40 169.9 102 80.4
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 5.6e-37 159.1 219 38.8
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 1.6e-36 157.5 176 54.0
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 1.4e-35 154.5 107 71.0
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 3.7e-33 146.4 81 82.7
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 8.3e-33 145.2 77 96.1
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 2.4e-32 143.7 110 63.6
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 6.0e-31 139.0 214 36.0
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 4.7e-28 129.4 98 65.3
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 2.9e-25 120.2 70 90.0
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 3.8e-25 119.8 94 60.6
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 8.7e-22 108.6 59 91.5
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 4.3e-21 106.3 179 44.1
HanXRQChr04g0127631 Helianthus annuus HOM05D006633 ORTHO05D008259 1.4e-19 101.3 56 92.9
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 1.3e-17 94.7 78 60.3
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 1.4e-16 91.3 67 61.2
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 6.0e-15 85.9 68 72.1
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 1.1e-13 81.6 58 63.8
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 2.2e-09 67.4 57 63.2
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 1.6e-07 61.2 60 45.0


User provided reference genes

Program Settings