Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 1.1e-245 852.8 418 100.0
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 3.9e-142 508.8 413 58.4
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 7.3e-141 504.6 429 59.0
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 1.2e-140 503.8 427 61.1
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 2.1e-140 503.1 415 60.5
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 1.2e-138 497.3 419 58.2
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 2.6e-138 496.1 421 59.9
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 3.4e-138 495.7 402 61.2
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 4.4e-138 495.4 423 58.9
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 5.8e-138 495.0 419 58.9
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 7.6e-138 494.6 419 58.0
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.7e-137 493.4 419 57.8
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 4.9e-137 491.9 420 58.3
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 8.4e-137 491.1 415 57.3
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 2.4e-136 489.6 414 59.2
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 4.1e-136 488.8 412 59.7
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 5.4e-136 488.4 447 56.6
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 9.2e-136 487.6 418 59.6
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 3.5e-135 485.7 417 57.8
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 7.8e-135 484.6 421 56.8
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 1.3e-134 483.8 420 56.7
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 1.7e-134 483.4 375 66.4
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 1.7e-134 483.4 416 58.2
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 2.3e-134 483.0 416 58.7
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 1.6e-132 476.9 419 56.1
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 8.1e-132 474.6 424 58.5
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 8.1e-132 474.6 409 58.2
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 1.8e-131 473.4 419 58.2
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 3.1e-131 472.6 436 56.7
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 4.0e-131 472.2 415 56.4
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 5.8e-130 468.4 415 58.3
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 2.2e-129 466.5 414 58.7
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 4.9e-129 465.3 435 54.5
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 1.9e-128 463.4 419 57.8
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 2.4e-128 463.0 414 57.5
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 4.2e-128 462.2 416 53.1
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 5.4e-128 461.8 416 54.6
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 4.6e-127 458.8 416 57.7
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 4.6e-127 458.8 412 56.6
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 4.6e-127 458.8 475 53.1
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 7.8e-127 458.0 422 57.1
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 2.3e-126 456.4 541 48.8
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 3.0e-126 456.1 425 56.2
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 3.9e-126 455.7 401 58.6
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 8.7e-126 454.5 430 54.2
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 1.1e-125 454.1 420 55.2
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 1.3e-124 450.7 433 53.3
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 1.6e-124 450.3 426 53.3
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 2.8e-124 449.5 415 57.8
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 4.8e-124 448.7 445 53.5
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 4.8e-124 448.7 445 53.5
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 2.4e-123 446.4 421 53.9
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 3.1e-123 446.0 439 55.4
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 4.0e-123 445.7 416 57.7
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 5.3e-123 445.3 420 53.8
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 6.9e-123 444.9 410 56.8
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 1.5e-122 443.7 439 50.8
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 2.0e-122 443.4 439 54.2
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 1.3e-121 440.7 410 54.4
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 2.2e-121 439.9 414 54.8
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 4.9e-121 438.7 430 54.0
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 4.9e-121 438.7 415 54.0
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 6.4e-121 438.3 334 67.4
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.4e-120 437.2 458 50.9
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 2.4e-120 436.4 323 65.3
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 4.2e-120 435.6 425 54.1
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 9.3e-120 434.5 411 53.0
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 1.2e-119 434.1 411 53.0
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 2.7e-119 433.0 408 54.2
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 6.0e-119 431.8 412 53.6
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 1.3e-118 430.6 409 54.5
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 6.7e-118 428.3 417 51.8
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 1.9e-117 426.8 410 54.4
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 7.4e-117 424.9 419 52.0
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 2.4e-115 419.9 418 52.4
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 5.3e-115 418.7 413 52.5
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 1.7e-113 413.7 374 58.0
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 4.2e-112 409.1 368 56.8
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 2.7e-111 406.4 430 51.2
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 1.3e-110 404.1 399 51.4
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 1.1e-109 401.0 373 55.8
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 1.6e-108 397.1 423 49.2
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 8.2e-108 394.8 330 59.7
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 9.0e-107 391.3 429 50.1
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 2.8e-100 369.8 443 47.0
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 2.8e-100 369.8 416 47.1
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 6.9e-99 365.2 383 51.2
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 1.2e-98 364.4 436 47.2
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 1.9e-96 357.1 332 54.2
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 4.3e-93 345.9 353 53.5
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 2.7e-87 326.6 435 43.4
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 2.6e-85 320.1 437 41.4
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 5.7e-85 318.9 396 44.2
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 1.4e-80 304.3 291 50.9
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 2.2e-76 290.4 364 43.1
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 2.0e-74 283.9 338 50.3
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 2.2e-73 280.4 363 44.9
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 1.4e-67 261.2 288 47.6
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 9.8e-61 238.4 198 58.1
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 5.2e-54 216.1 193 51.3
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 2.0e-53 214.2 395 33.7
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 1.6e-47 194.5 221 50.2
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 1.2e-42 178.3 221 41.6
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 1.6e-39 167.9 230 42.6
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.2e-29 135.2 167 50.9
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 7.6e-21 105.9 169 40.2
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 7.6e-21 105.9 86 55.8
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 1.5e-16 91.7 161 37.9
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 6.2e-15 86.3 75 49.3
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 6.4e-12 76.3 195 29.2
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 1.5e-08 65.1 94 48.9
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 6.2e-07 59.7 46 65.2


User provided reference genes

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