Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0436271 Helianthus annuus HOM05D000094 ORTHO05D020417 8.9e-129 465.3 761 100.0
HanXRQChr10g0293951 Helianthus annuus HOM05D000094 ORTHO05D020417 3.1e-49 201.1 449 83.5
HanXRQChr10g0293931 Helianthus annuus HOM05D000094 ORTHO05D002388 9.2e-49 199.5 445 86.5
HanXRQChr15g0470271 Helianthus annuus HOM05D000094 ORTHO05D020417 1.7e-39 168.7 418 84.4
HanXRQChr12g0370981 Helianthus annuus HOM05D000013 ORTHO05D000011 5.8e-35 153.7 113 85.8
Lj3C358T0 Lonicera japonica HOM05D000094 ORTHO05D002388 2.0e-27 128.6 263 77.2
ECA248G1538 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-22 112.1 92 78.3
Actinidia39097 Actinidia chinensis HOM05D000094 ORTHO05D002388 1.6e-21 109.0 265 77.7
Actinidia26044 Actinidia chinensis HOM05D000094 ORTHO05D002388 8.1e-21 106.7 265 73.6
Dinv22707 Davidia involucrata HOM05D000094 ORTHO05D002388 2.3e-20 105.1 265 77.0
EL10Ac3g07393 Beta vulgaris HOM05D000094 ORTHO05D002388 5.2e-20 104.0 263 67.7
DCAR_023799 Daucus carota HOM05D000094 ORTHO05D002388 1.5e-19 102.4 219 78.1
Sc25g0005630 Simmondsia chinensis HOM05D000094 ORTHO05D002388 4.9e-18 97.4 262 71.8
Aqoxy2G04065 Aquilegia oxysepala HOM05D000094 ORTHO05D002388 1.4e-17 95.9 217 75.6
Dinv44210 Davidia involucrata HOM05D000094 ORTHO05D017818 4.1e-17 94.4 265 67.5
HPP92_000354 Vanilla planifolia HOM05D000094 ORTHO05D017818 2.1e-16 92.0 105 43.8
TAR362G0036 Trochodendron aralioides HOM05D000094 ORTHO05D002388 4.6e-16 90.9 263 71.1
AUR62018484 Chenopodium quinoa HOM05D000094 ORTHO05D002388 6.0e-16 90.5 263 65.8
CAN.G710.52 Capsicum annuum HOM05D000094 ORTHO05D002388 1.0e-15 89.7 263 70.0
Lsat_1_v5_gn_2_48221 Lactuca sativa HOM05D000094 ORTHO05D002388 3.9e-15 87.8 335 77.3
Nn1g09888 Nelumbo nucifera HOM05D000094 ORTHO05D002388 6.6e-15 87.0 217 76.5
Os01g0917500 Oryza sativa ssp. japonica HOM05D000094 ORTHO05D002388 8.6e-15 86.7 219 76.3
Peaxi162Scf00286g00028 Petunia axillaris HOM05D000094 ORTHO05D002388 1.5e-14 85.9 333 73.0
Solyc09g098420.3 Solanum lycopersicum HOM05D000094 ORTHO05D002388 1.9e-14 85.5 263 70.7
PGSC0003DMG400021622 Solanum tuberosum HOM05D000094 ORTHO05D002388 1.9e-14 85.5 263 70.7
CSS0018977 Camellia sinensis var. sinensis HOM05D000094 ORTHO05D002388 5.6e-14 84.0 333 70.3
CSS0020762 Camellia sinensis var. sinensis HOM05D000094 ORTHO05D002388 5.6e-14 84.0 333 70.3
AUR62020939 Chenopodium quinoa HOM05D000094 ORTHO05D002388 9.6e-14 83.2 263 65.8
AUR62021297 Chenopodium quinoa HOM05D000094 ORTHO05D002388 1.2e-13 82.8 216 77.3
Cc03_g10840 Coffea canephora HOM05D000094 ORTHO05D002388 2.8e-13 81.6 261 71.3
Hma1.2p1_1286F.1_g273120 Hydrangea macrophylla HOM05D000094 ORTHO05D002388 4.7e-13 80.9 266 64.7
Sopen09g036350 Solanum pennellii HOM05D000094 ORTHO05D002388 6.2e-13 80.5 263 70.3
Rhsim02G0071600 Rhododendron simsii HOM05D000094 ORTHO05D002388 1.8e-12 79.0 265 69.4
CDE09G1099 Ceratophyllum demersum HOM05D000094 ORTHO05D002388 2.4e-12 78.6 217 75.1
HPP92_000421 Vanilla planifolia HOM05D000094 ORTHO05D017818 5.2e-12 77.4 216 74.5
ECA238G0840 Erigeron canadensis HOM05D000094 ORTHO05D002388 1.2e-11 76.3 263 69.6
Zm00001eb143420 Zea mays HOM05D000094 ORTHO05D002388 3.4e-11 74.7 264 64.8
Nitab4.5_0002313g0050 Nicotiana tabacum HOM05D000094 ORTHO05D002388 1.3e-10 72.8 263 68.4
Nitab4.5_0006213g0030 Nicotiana tabacum HOM05D000094 ORTHO05D002388 8.4e-10 70.1 263 67.7
HanXRQChr04g0098731 Helianthus annuus HOM05D000002 ORTHO05D000001 4.2e-09 67.8 62 56.5
HanXRQChr08g0228031 Helianthus annuus HOM05D000002 ORTHO05D000001 3.5e-08 64.7 69 50.7
Ciclev10004265m.g Citrus clementina HOM05D000094 ORTHO05D002388 4.6e-08 64.3 56 50.0
PSO017G1116 Papaver somniferum HOM05D000094 ORTHO05D002388 1.0e-07 63.2 269 65.1
HanXRQChr03g0090001 Helianthus annuus HOM05D000002 ORTHO05D000001 1.3e-07 62.8 70 48.6
Sabra17G0006900 Salix brachista HOM05D000094 ORTHO05D000001 3.0e-07 61.6 63 46.0
HanXRQChr09g0272931 Helianthus annuus HOM05D000002 ORTHO05D000001 3.9e-07 61.2 51 56.9
ATR1147G009 Amborella trichopoda HOM05D000094 ORTHO05D002388 5.1e-07 60.8 195 72.8
SEGI_06960 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 5.1e-07 60.8 95 38.9
ECA236G2743 Erigeron canadensis HOM05D000067 ORTHO05D000097 6.6e-07 60.5 55 56.4
Sabra10G0184600 Salix brachista HOM05D001381 ORTHO05D000001 6.6e-07 60.5 63 46.0
Sabra16G0042600 Salix brachista HOM05D000002 ORTHO05D000001 6.6e-07 60.5 63 46.0
Sabra16G0279200 Salix brachista HOM05D000002 ORTHO05D000001 6.6e-07 60.5 63 46.0
SEGI_06180 Sequoiadendron giganteum HOM05D000094 ORTHO05D002388 6.6e-07 60.5 51 49.0
ECA246G1621 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-07 60.1 70 52.9
ECA234G1796 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-06 59.7 51 56.9
ECA234G3856 Erigeron canadensis HOM05D003510 ORTHO05D000001 1.1e-06 59.7 55 56.4
Migut.G01136 Erythranthe guttata HOM05D000094 ORTHO05D002388 1.1e-06 59.7 269 32.3
ECA233G2021 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 59.3 70 52.9
HanXRQChr11g0332431 Helianthus annuus HOM05D000013 ORTHO05D000001 1.5e-06 59.3 48 60.4
HanXRQChr01g0011931 Helianthus annuus HOM05D000002 ORTHO05D000001 1.9e-06 58.9 70 48.6
AUR62033214 Chenopodium quinoa HOM05D000094 ORTHO05D002388 2.5e-06 58.5 216 73.1
ECA233G4354 Erigeron canadensis HOM05D009391 ORTHO05D000001 2.5e-06 58.5 48 56.2
Os08g0125300 Oryza sativa ssp. japonica HOM05D000002 ORTHO05D000001 2.5e-06 58.5 61 50.8
ECA232G0615 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-06 58.2 74 48.6
HanXRQChr16g0521091 Helianthus annuus HOM05D000002 ORTHO05D000001 3.3e-06 58.2 72 54.2
Sabra02G0040800 Salix brachista HOM05D004770 ORTHO05D005572 3.3e-06 58.2 105 37.1
Ah.04g149870 Amaranthus hybridus HOM05D000094 ORTHO05D002388 4.3e-06 57.8 263 64.3
GSVIVG01025718001 Vitis vinifera HOM05D000094 ORTHO05D017818 4.3e-06 57.8 55 52.7
CSS0038036 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 5.6e-06 57.4 93 36.6
AUR62040316 Chenopodium quinoa HOM05D000094 ORTHO05D020417 5.6e-06 57.4 133 39.8
ECA233G0656 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.6e-06 57.4 54 59.3
PSO675G4842 Papaver somniferum HOM05D000094 ORTHO05D002388 7.3e-06 57.0 49 53.1
BcaC01g03463 Brassica carinata HOM05D000053 ORTHO05D000035 9.6e-06 56.6 106 31.1
BolC3t17501H Brassica oleracea HOM05D000053 ORTHO05D000035 9.6e-06 56.6 106 31.1
ECA233G0824 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.6e-06 56.6 48 54.2
ECA236G2708 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.6e-06 56.6 69 43.5
ECA246G4831 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.6e-06 56.6 70 52.9


User provided reference genes

Program Settings