Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 1.6e-71 272.7 142 100.0
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 6.5e-57 224.2 153 79.7
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 1.1e-45 186.8 120 79.2
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 7.4e-45 184.1 129 76.7
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 1.7e-44 183.0 151 71.5
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 2.8e-44 182.2 131 76.3
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 4.8e-44 181.4 120 76.7
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 4.8e-44 181.4 120 76.7
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 8.2e-44 180.6 123 78.9
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 8.2e-44 180.6 120 75.8
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 2.4e-43 179.1 142 67.6
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 2.4e-43 179.1 153 66.7
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 2.4e-43 179.1 131 74.0
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 3.1e-43 178.7 131 74.0
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 4.1e-43 178.3 140 70.0
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 5.3e-43 177.9 122 78.7
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 9.1e-43 177.2 150 68.7
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 1.2e-42 176.8 117 77.8
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 1.2e-42 176.8 134 73.9
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 1.5e-42 176.4 128 75.0
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 1.5e-42 176.4 115 81.7
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 4.5e-42 174.9 138 69.6
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 4.5e-42 174.9 142 72.5
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 5.9e-42 174.5 132 73.5
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 5.9e-42 174.5 133 67.7
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 7.7e-42 174.1 145 68.3
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 1.0e-41 173.7 131 72.5
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 1.0e-41 173.7 131 71.0
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 1.3e-41 173.3 119 73.9
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 2.2e-41 172.6 140 65.7
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 2.2e-41 172.6 141 67.4
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 2.9e-41 172.2 116 79.3
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 5.0e-41 171.4 145 66.9
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 5.0e-41 171.4 142 67.6
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 5.0e-41 171.4 122 73.8
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 6.5e-41 171.0 141 68.8
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 8.5e-41 170.6 138 69.6
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 8.5e-41 170.6 120 76.7
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 1.1e-40 170.2 145 66.9
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 1.1e-40 170.2 121 76.0
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 1.1e-40 170.2 135 68.1
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 1.4e-40 169.9 130 72.3
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 1.9e-40 169.5 116 78.4
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.5e-40 169.1 145 69.0
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 2.5e-40 169.1 129 75.2
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 2.5e-40 169.1 142 67.6
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 3.2e-40 168.7 126 70.6
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 3.2e-40 168.7 135 67.4
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 4.2e-40 168.3 117 75.2
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 4.2e-40 168.3 144 65.3
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 5.5e-40 167.9 117 74.4
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 7.2e-40 167.5 137 67.2
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 7.2e-40 167.5 153 64.7
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 9.4e-40 167.2 145 65.5
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.2e-39 166.8 145 68.3
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 1.6e-39 166.4 145 68.3
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 1.6e-39 166.4 133 69.2
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 2.7e-39 165.6 120 72.5
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 2.7e-39 165.6 117 73.5
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 3.6e-39 165.2 130 70.0
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 4.7e-39 164.9 134 69.4
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 6.1e-39 164.5 151 64.9
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 6.1e-39 164.5 120 72.5
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 7.9e-39 164.1 122 73.0
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 7.9e-39 164.1 134 70.9
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 7.9e-39 164.1 119 73.1
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 1.4e-38 163.3 123 73.2
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.8e-38 162.9 116 72.4
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 2.3e-38 162.5 119 76.5
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 2.3e-38 162.5 116 75.9
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.3e-38 162.5 116 75.0
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.3e-38 162.5 115 73.9
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 2.3e-38 162.5 115 73.9
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 2.3e-38 162.5 167 59.3
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 2.3e-38 162.5 140 67.1
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 3.0e-38 162.2 143 66.4
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 3.9e-38 161.8 143 65.7
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 3.9e-38 161.8 118 74.6
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 3.9e-38 161.8 117 73.5
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 5.2e-38 161.4 119 73.9
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 5.2e-38 161.4 118 74.6
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 6.7e-38 161.0 118 74.6
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 8.8e-38 160.6 130 69.2
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 8.8e-38 160.6 131 69.5
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 8.8e-38 160.6 144 66.7
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 1.1e-37 160.2 138 65.9
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 1.1e-37 160.2 139 64.7
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 1.5e-37 159.8 143 60.8
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 1.5e-37 159.8 122 70.5
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 2.0e-37 159.5 143 63.6
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 2.0e-37 159.5 143 63.6
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 2.6e-37 159.1 119 71.4
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 2.6e-37 159.1 130 67.7
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 5.7e-37 157.9 120 73.3
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 9.7e-37 157.1 123 71.5
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 9.7e-37 157.1 123 71.5
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 9.7e-37 157.1 131 68.7
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 1.7e-36 156.4 140 64.3
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 1.7e-36 156.4 137 62.8
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 1.4e-35 153.3 134 64.2
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 1.4e-35 153.3 117 69.2
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 1.8e-35 152.9 111 73.9
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 1.2e-34 150.2 135 64.4
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 2.6e-34 149.1 124 63.7
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 3.5e-34 148.7 135 60.0
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 4.5e-34 148.3 124 69.4
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 1.0e-33 147.1 119 67.2
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 8.5e-33 144.1 132 61.4
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 3.2e-32 142.1 78 89.7
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 1.6e-31 139.8 142 56.3
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 1.8e-30 136.3 130 58.5
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 2.3e-30 136.0 78 85.9
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 9.7e-29 130.6 124 60.5
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 6.3e-28 127.9 94 73.4
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 3.1e-27 125.6 78 80.8
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 1.2e-26 123.6 75 78.7
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 3.8e-25 118.6 107 57.0
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 7.2e-24 114.4 106 58.5
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 2.7e-23 112.5 111 62.2
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 2.7e-23 112.5 130 53.1
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 3.0e-22 109.0 80 70.0
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 5.7e-21 104.8 106 57.5
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 5.4e-19 98.2 75 61.3
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 2.0e-18 96.3 78 62.8
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 1.9e-16 89.7 129 43.4
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 2.1e-15 86.3 107 41.1
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 1.2e-07 60.5 36 86.1
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 3.6e-07 58.9 65 46.2


User provided reference genes

Program Settings