Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0434671 Helianthus annuus HOM05D008488 ORTHO05D000385 2.3e-125 452.2 221 100.0
HanXRQChr03g0071501 Helianthus annuus HOM05D008488 ORTHO05D000385 5.1e-109 397.9 198 98.5
ECA246G4823 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.8e-90 336.3 217 78.3
ECA327G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.8e-90 336.3 217 78.3
ECA233G0549 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.4e-81 305.4 217 71.4
ECA246G0609 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.8e-80 302.0 229 69.0
ECA234G1560 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.4e-71 273.5 193 72.0
HanXRQChr09g0254541 Helianthus annuus HOM05D008488 ORTHO05D000385 7.2e-71 271.2 136 98.5
ECA096G0001 Erigeron canadensis HOM05D008488 ORTHO05D000385 9.4e-71 270.8 178 77.5
ECA127G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.1e-70 269.6 178 77.5
ECA234G3995 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.7e-70 269.2 194 71.6
HanXRQChr05g0141791 Helianthus annuus HOM05D008488 ORTHO05D000385 4.7e-70 268.5 135 98.5
ECA247G3403 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.6e-68 262.7 196 68.4
ECA164G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.4e-58 229.6 217 58.5
ECA234G2194 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-58 228.4 216 57.9
ECA246G0161 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.2e-48 196.4 136 76.5
ECA238G3595 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.1e-47 194.1 195 55.4
ECA233G1871 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.3e-45 186.4 217 50.7
HanXRQChr08g0236751 Helianthus annuus HOM05D008488 ORTHO05D000385 2.0e-44 183.3 108 85.2
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 4.1e-42 175.6 221 39.8
ECA234G0887 Erigeron canadensis HOM05D008488 ORTHO05D000385 5.0e-40 168.7 170 55.3
vmacro21586 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.0e-37 161.0 197 39.6
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.0e-37 161.0 197 39.6
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.0e-37 161.0 197 39.6
vmacro03917 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.4e-37 160.6 198 39.4
ECA234G1460 Erigeron canadensis HOM05D008488 ORTHO05D000385 9.5e-31 137.9 84 77.4
ECA236G1232 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.3e-29 133.3 130 56.2
vmacro03942 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 6.8e-29 131.7 195 38.5
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.4e-27 125.2 215 35.3
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.2e-26 121.3 222 34.7
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.7e-25 119.8 223 34.1
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.6e-25 119.0 223 34.1
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.0e-24 116.3 225 32.9
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 2.5e-23 113.2 247 31.6
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 1.6e-22 110.5 241 31.1
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.8e-22 109.8 230 32.6
MBI02_g35833_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.6e-22 109.4 254 31.5
ECA238G1683 Erigeron canadensis HOM05D009718 ORTHO05D000385 6.2e-22 108.6 156 41.0
HanXRQChr14g0427591 Helianthus annuus HOM05D008488 ORTHO05D000385 1.5e-20 104.0 52 92.3
vmacro09403 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 5.8e-20 102.1 83 51.8
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.8e-20 101.3 223 32.3
CANSAT64G2013 Cannabis sativa HOM05D008488 ORTHO05D000385 3.7e-19 99.4 244 28.7
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 6.4e-19 98.6 232 30.6
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-18 97.8 259 28.6
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-18 97.4 245 29.4
HanXRQChr04g0111371 Helianthus annuus HOM05D008488 ORTHO05D000385 1.6e-17 94.0 45 100.0
CANSAT35G0020 Cannabis sativa HOM05D001309 ORTHO05D000385 6.0e-17 92.0 227 29.5
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.8e-17 91.7 238 29.8
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.3e-15 85.9 227 29.5
ECA233G5932 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.6e-15 85.5 52 75.0
HanXRQChr09g0263931 Helianthus annuus HOM05D008488 ORTHO05D000385 9.5e-15 84.7 45 88.9
MBI15_g16946_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.7e-14 82.4 244 27.5
MBI09_g41431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-13 80.5 204 31.9
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.8e-12 75.5 241 27.0
MBI19_g12819_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.6e-12 75.1 117 36.8
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 2.2e-11 73.6 213 28.2
MBI01_g25641_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.9e-11 73.2 199 28.1
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 6.4e-11 72.0 221 27.1
ECA234G2934 Erigeron canadensis HOM05D000006 ORTHO05D000091 8.4e-11 71.6 68 54.4
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-10 71.2 73 45.2
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.2e-10 69.7 77 42.9
MBI19_g42303_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D006588 9.2e-10 68.2 73 47.9
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 1.2e-09 67.8 233 28.3
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.6e-09 67.4 231 26.8
MBI15_g37113_MAGBIO Magnolia biondii HOM05D000308 ORTHO05D000194 2.7e-09 66.6 72 48.6
MBI17_g21607_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.6e-09 65.9 264 22.7
MBI01_g02357_MAGBIO Magnolia biondii HOM05D008488 ORTHO05D000385 7.8e-09 65.1 73 46.6
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 1.0e-08 64.7 221 26.7
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 6.6e-08 62.0 221 22.6
Nn3g21267 Nelumbo nucifera HOM05D008488 ORTHO05D000385 8.6e-08 61.6 59 45.8
MBI16_g15341_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-07 61.2 111 36.9
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 1.9e-07 60.5 217 25.8
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 2.5e-07 60.1 183 24.0
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 3.3e-07 59.7 187 23.0
MBI18_g39412_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.3e-07 59.7 73 46.6
HanXRQChr13g0414481 Helianthus annuus HOM05D008488 ORTHO05D000385 7.3e-07 58.5 27 88.9
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 1.2e-06 57.8 85 32.9
MBI19_g00150_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-06 57.8 173 28.3
ECA234G0977 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.1e-06 57.0 37 70.3
Nn7g36718 Nelumbo nucifera HOM05D008488 ORTHO05D000385 3.6e-06 56.2 59 42.4
Dinv08948 Davidia involucrata HOM05D010146 ORTHO05D000385 4.7e-06 55.8 134 29.9
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 6.2e-06 55.5 137 29.9


User provided reference genes

Program Settings