Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0434591 Helianthus annuus HOM05D000329 ORTHO05D005330 1.1e-145 520.0 263 100.0
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 5.3e-89 331.6 178 93.3
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 1.0e-79 300.8 178 85.4
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 8.5e-79 297.7 178 84.3
QL03p030502 Quercus lobata HOM05D000329 ORTHO05D005330 6.1e-61 238.4 178 65.2
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 1.8e-60 236.9 178 62.9
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 4.0e-60 235.7 178 64.6
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 3.4e-59 232.6 178 62.9
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 7.5e-59 231.5 178 62.4
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 9.8e-59 231.1 178 62.4
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 1.3e-58 230.7 178 62.9
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 1.3e-58 230.7 178 61.8
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 2.9e-58 229.6 178 61.8
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 3.7e-58 229.2 178 62.9
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 4.9e-58 228.8 178 62.4
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 6.4e-58 228.4 178 61.2
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 6.4e-58 228.4 178 61.2
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 1.1e-57 227.6 178 61.8
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 1.1e-57 227.6 178 62.4
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.8e-57 226.9 178 61.2
Hma1.2p1_1512F.1_g287930 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 2.4e-57 226.5 178 61.8
Hma1.2p1_1512F.1_g287950 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 2.4e-57 226.5 178 61.8
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 4.1e-57 225.7 178 61.8
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 5.4e-57 225.3 178 61.2
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 5.4e-57 225.3 178 60.1
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 5.4e-57 225.3 178 60.7
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 7.0e-57 224.9 178 61.2
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 7.0e-57 224.9 175 63.4
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 9.2e-57 224.6 178 60.7
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 9.2e-57 224.6 178 60.7
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 9.2e-57 224.6 178 61.8
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 1.2e-56 224.2 178 62.4
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 1.2e-56 224.2 178 60.7
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.2e-56 224.2 178 60.7
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.2e-56 224.2 178 60.7
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 1.6e-56 223.8 178 60.7
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 2.0e-56 223.4 178 60.1
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 2.0e-56 223.4 175 61.7
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 2.0e-56 223.4 178 60.7
SalBow6G5354 Salvia bowleyana HOM05D000329 ORTHO05D005330 2.0e-56 223.4 178 62.9
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 2.0e-56 223.4 178 60.7
Sabra19G0028500 Salix brachista HOM05D000329 ORTHO05D000833 2.7e-56 223.0 178 60.7
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 4.6e-56 222.2 178 60.7
VMungo0540G0180 Vigna mungo HOM05D000329 ORTHO05D005330 4.6e-56 222.2 178 61.2
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 6.0e-56 221.9 178 60.1
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 6.0e-56 221.9 178 60.1
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 6.0e-56 221.9 178 60.1
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 6.0e-56 221.9 178 60.1
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 6.0e-56 221.9 178 60.1
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 6.0e-56 221.9 178 60.1
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 7.8e-56 221.5 178 60.1
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.0e-55 221.1 183 60.1
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 1.0e-55 221.1 178 60.1
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 1.0e-55 221.1 178 60.7
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 1.3e-55 220.7 178 60.1
Haze_04433 Corylus avellana HOM05D000329 ORTHO05D005330 1.7e-55 220.3 178 61.2
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 2.3e-55 219.9 178 60.7
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 2.3e-55 219.9 175 61.1
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 3.9e-55 219.2 178 59.6
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 5.0e-55 218.8 175 61.7
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 5.0e-55 218.8 175 61.1
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 5.0e-55 218.8 175 61.1
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 6.6e-55 218.4 178 60.7
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 8.6e-55 218.0 178 59.0
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 1.1e-54 217.6 178 60.1
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 1.5e-54 217.2 178 60.1
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 1.5e-54 217.2 178 59.6
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 2.5e-54 216.5 178 60.7
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 1.2e-53 214.2 178 58.4
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 1.2e-53 214.2 178 58.4
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 1.6e-53 213.8 178 60.7
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 1.6e-53 213.8 178 60.7
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 2.8e-53 213.0 178 58.4
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 3.6e-53 212.6 184 59.2
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 4.7e-53 212.2 179 58.7
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 1.1e-52 211.1 179 57.5
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 1.1e-52 211.1 180 60.0
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 1.1e-52 211.1 181 59.1
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 1.1e-52 211.1 178 57.9
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 2.3e-52 209.9 178 56.7
ClCG06G009520 Citrullus lanatus HOM05D000329 ORTHO05D005330 3.1e-52 209.5 180 57.8
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 8.9e-52 208.0 178 57.3
Nitab4.5_0000432g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.2e-51 207.6 178 58.4
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 2.6e-51 206.5 178 56.7
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 2.6e-51 206.5 178 56.7
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 3.4e-51 206.1 178 59.0
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 7.5e-51 204.9 178 56.7
CAN.G155.4 Capsicum annuum HOM05D000329 ORTHO05D005330 1.3e-50 204.1 178 58.4
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 1.7e-50 203.8 178 57.3
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 2.2e-50 203.4 175 58.9
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 2.2e-50 203.4 175 58.9
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 2.2e-50 203.4 175 58.9
arahy.Tifrunner.gnm1.ann1.I5XT77 Arachis hypogaea HOM05D000329 ORTHO05D005330 2.9e-50 203.0 171 59.6
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 8.3e-50 201.4 178 57.9
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 1.3e-47 194.1 179 54.2
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 8.6e-47 191.4 178 51.1
SEGI_29711 Sequoiadendron giganteum HOM05D000329 ORTHO05D005330 8.9e-44 181.4 176 52.8
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 7.5e-43 178.3 179 49.7
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 2.2e-42 176.8 178 51.1
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 4.9e-42 175.6 179 48.6
HPP92_025571 Vanilla planifolia HOM05D000329 ORTHO05D005330 5.4e-41 172.2 178 48.9
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.2e-40 171.0 178 51.1
HPP92_025621 Vanilla planifolia HOM05D000329 ORTHO05D005330 4.6e-40 169.1 178 48.3
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 1.9e-38 163.7 178 45.5
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 1.4e-36 157.5 175 48.6
DCAR_000980 Daucus carota HOM05D000329 ORTHO05D005330 8.9e-36 154.8 192 46.9
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 2.6e-35 153.3 203 39.9
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 6.4e-34 148.7 223 42.6
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 8.4e-34 148.3 178 44.4
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 8.4e-34 148.3 178 44.4
Nitab4.5_0003285g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 7.8e-32 141.7 201 42.3
CDE08G1568 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 2.0e-27 127.1 162 43.8
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 1.4e-25 120.9 97 55.7
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 1.1e-20 104.8 178 38.8
MBI10_g44932_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D005330 6.9e-20 102.1 178 36.5
Haze_05933 Corylus avellana HOM05D000329 ORTHO05D005330 7.1e-17 92.0 74 64.9
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 1.3e-13 81.3 181 31.5
BcaB04g19325 Brassica carinata HOM05D000329 ORTHO05D005330 5.3e-12 75.9 109 39.4
PRCOL_00003022 Prasinoderma coloniale HOM05D000329 ORTHO05D005330 2.6e-11 73.6 170 30.6
CSS0009838 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 5.1e-07 59.3 131 25.2
Actinidia37867 Actinidia chinensis HOM05D003429 ORTHO05D003873 3.3e-06 56.6 131 25.2
Actinidia17975 Actinidia chinensis HOM05D003429 ORTHO05D003873 4.3e-06 56.2 131 25.2
vmacro07588 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 5.6e-06 55.8 131 25.2
vmacro07757 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 5.6e-06 55.8 131 25.2
RhsimUnG0020700 Rhododendron simsii HOM05D003429 ORTHO05D003873 9.6e-06 55.1 131 25.2


User provided reference genes

Program Settings