Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0433881 Helianthus annuus HOM05D000371 ORTHO05D008019 5.9e-83 310.8 159 100.0
HanXRQChr12g0386381 Helianthus annuus HOM05D000371 ORTHO05D008019 1.2e-35 153.7 159 59.1
HanXRQChr10g0312861 Helianthus annuus HOM05D000371 ORTHO05D008019 7.8e-27 124.4 112 65.2
ECA238G3066 Erigeron canadensis HOM05D000371 ORTHO05D008019 1.3e-26 123.6 112 65.2
DCAR_010468 Daucus carota HOM05D000371 ORTHO05D008019 3.0e-26 122.5 79 74.7
Lsat_1_v5_gn_2_118301 Lactuca sativa HOM05D000371 ORTHO05D008019 3.0e-26 122.5 112 64.3
Aa31LG10G10550 Aethionema arabicum HOM05D000371 ORTHO05D008019 3.3e-25 119.0 97 61.9
SGA_v2.0_scaffold221G42682 Striga asiatica HOM05D000371 ORTHO05D008019 4.3e-25 118.6 117 59.0
Aqoxy2G02270 Aquilegia oxysepala HOM05D000371 ORTHO05D008019 7.3e-25 117.9 77 71.4
TWI38G0343 Tripterygium wilfordii HOM05D000371 ORTHO05D008019 7.3e-25 117.9 78 74.4
TAR636G0788 Trochodendron aralioides HOM05D000371 ORTHO05D008019 1.2e-24 117.1 78 73.1
TAR636G0917 Trochodendron aralioides HOM05D000371 ORTHO05D008019 1.2e-24 117.1 78 73.1
Ciclev10032851m.g Citrus clementina HOM05D000371 ORTHO05D008019 1.6e-24 116.7 115 58.3
ATR0559G040 Amborella trichopoda HOM05D000371 ORTHO05D008019 2.1e-24 116.3 77 72.7
Dinv26032 Davidia involucrata HOM05D000371 ORTHO05D008019 2.8e-24 115.9 78 71.8
Sc11g0007880 Simmondsia chinensis HOM05D000371 ORTHO05D008019 2.8e-24 115.9 73 76.7
PSO513G0068 Papaver somniferum HOM05D000371 ORTHO05D008019 3.6e-24 115.5 74 74.3
Sed0007769 Sechium edule HOM05D000371 ORTHO05D008019 3.6e-24 115.5 73 76.7
THA.LOC104810039 Tarenaya hassleriana HOM05D000371 ORTHO05D008019 4.7e-24 115.2 76 75.0
CsaV3_6G001250 Cucumis sativus L. HOM05D000371 ORTHO05D008019 6.2e-24 114.8 73 76.7
TPR.G3468 Trifolium pratense HOM05D000371 ORTHO05D008019 6.2e-24 114.8 110 59.1
CANSAT56G3583 Cannabis sativa HOM05D000371 ORTHO05D008019 8.1e-24 114.4 76 71.1
CiPaw.01G289600 Carya illinoinensis HOM05D000371 ORTHO05D008019 8.1e-24 114.4 74 73.0
Phvul.001G233400 Phaseolus vulgaris HOM05D000371 ORTHO05D008019 8.1e-24 114.4 113 54.9
Sp5g06960 Schrenkiella parvula HOM05D000371 ORTHO05D008019 8.1e-24 114.4 78 70.5
Thecc.10G036900 Theobroma cacao HOM05D000371 ORTHO05D008019 8.1e-24 114.4 76 72.4
MSTRG.8260 Avicennia marina HOM05D000371 ORTHO05D008019 1.1e-23 114.0 115 56.5
Glyma.18G037300 Glycine max HOM05D000371 ORTHO05D008019 1.1e-23 114.0 69 76.8
Gohir.D06G172100 Gossypium hirsutum HOM05D000371 ORTHO05D008019 1.1e-23 114.0 78 71.8
Gorai.010G201100 Gossypium raimondii HOM05D000371 ORTHO05D008019 1.1e-23 114.0 78 71.8
Nitab4.5_0001002g0040 Nicotiana tabacum HOM05D000371 ORTHO05D008019 1.1e-23 114.0 73 74.0
Nitab4.5_0012064g0010 Nicotiana tabacum HOM05D000371 ORTHO05D008019 1.1e-23 114.0 73 74.0
Zm00001eb289600 Zea mays HOM05D000371 ORTHO05D008019 1.1e-23 114.0 76 72.4
QL08p060252 Quercus lobata HOM05D000371 ORTHO05D008019 1.4e-23 113.6 78 71.8
QL08p060477 Quercus lobata HOM05D000371 ORTHO05D008019 1.4e-23 113.6 78 71.8
EL10Ac2g04725 Beta vulgaris HOM05D000371 ORTHO05D008019 2.4e-23 112.8 69 76.8
Cfa001451 Carpinus fangiana HOM05D000371 ORTHO05D008019 2.4e-23 112.8 73 74.0
Haze_17090 Corylus avellana HOM05D000371 ORTHO05D008019 2.4e-23 112.8 76 72.4
Psat2g040520 Pisum sativum HOM05D000371 ORTHO05D008019 2.4e-23 112.8 110 59.1
Sabra08G0042500 Salix brachista HOM05D000371 ORTHO05D008019 2.4e-23 112.8 67 79.1
PGSC0003DMG400006351 Solanum tuberosum HOM05D000371 ORTHO05D008019 2.4e-23 112.8 71 76.1
Gohir.A06G166600 Gossypium hirsutum HOM05D000371 ORTHO05D008019 3.1e-23 112.5 77 71.4
Lalb_Chr04g0251111 Lupinus albus HOM05D000371 ORTHO05D008019 3.1e-23 112.5 69 75.4
Os05g0458100 Oryza sativa ssp. japonica HOM05D000371 ORTHO05D008019 3.1e-23 112.5 76 71.1
Hund13781 Selenicereus undatus HOM05D000371 ORTHO05D008019 3.1e-23 112.5 74 73.0
Atru.chr12.417 Acer truncatum HOM05D000371 ORTHO05D008019 4.0e-23 112.1 73 72.6
CDE04G1493 Ceratophyllum demersum HOM05D000371 ORTHO05D008019 4.0e-23 112.1 72 70.8
Migut.F01460 Erythranthe guttata HOM05D000371 ORTHO05D008019 4.0e-23 112.1 80 68.8
GSVIVG01016514001 Vitis vinifera HOM05D000371 ORTHO05D008019 4.0e-23 112.1 71 74.6
MELO3C008222.2 Cucumis melo HOM05D000371 ORTHO05D008019 5.2e-23 111.7 72 75.0
Glyma.11G220100 Glycine max HOM05D000371 ORTHO05D008019 5.2e-23 111.7 69 75.4
LjContig00141g0009492 Lotus japonicus HOM05D000371 ORTHO05D008019 5.2e-23 111.7 112 56.2
PSO339G5068 Papaver somniferum HOM05D000371 ORTHO05D008019 5.2e-23 111.7 74 73.0
Peaxi162Scf00440g00111 Petunia axillaris HOM05D000371 ORTHO05D008019 5.2e-23 111.7 74 73.0
FAN01G2167 Fragaria x ananassa HOM05D000371 ORTHO05D008019 6.8e-23 111.3 112 57.1
MD07G1201400 Malus domestica HOM05D000371 ORTHO05D008019 6.8e-23 111.3 116 55.2
VMungo1383G3505 Vigna mungo HOM05D000371 ORTHO05D008019 6.8e-23 111.3 115 53.9
CAN.G1826.1 Capsicum annuum HOM05D000371 ORTHO05D008019 8.9e-23 110.9 112 55.4
Thhalv10010745m.g Eutrema salsugineum HOM05D000371 ORTHO05D008019 8.9e-23 110.9 71 73.2
Manes.07G117900 Manihot esculenta HOM05D000371 ORTHO05D008019 8.9e-23 110.9 74 71.6
Solyc04g011620.3 Solanum lycopersicum HOM05D000371 ORTHO05D008019 8.9e-23 110.9 70 75.7
Sopen04g005800 Solanum pennellii HOM05D000371 ORTHO05D008019 8.9e-23 110.9 70 75.7
Cpa.g.sc1.428 Carica papaya HOM05D000371 ORTHO05D008019 1.2e-22 110.5 73 69.9
Medtr5g080300 Medicago truncatula HOM05D000371 ORTHO05D008019 1.2e-22 110.5 67 74.6
vmacro05072 Vaccinium macrocarpon HOM05D000371 ORTHO05D008019 1.2e-22 110.5 117 53.8
CARHR165580 Cardamine hirsuta HOM05D000371 ORTHO05D008019 1.5e-22 110.2 131 48.1
Potri.010G201600 Populus trichocarpa HOM05D000371 ORTHO05D008019 1.5e-22 110.2 67 76.1
AL5G36690 Arabidopsis lyrata HOM05D000371 ORTHO05D008019 2.0e-22 109.8 71 73.2
AT3G55520 Arabidopsis thaliana HOM05D000371 ORTHO05D008019 2.0e-22 109.8 71 73.2
Carub.0005s2225 Capsella rubella HOM05D000371 ORTHO05D008019 2.0e-22 109.8 71 73.2
FAN01G1452 Fragaria x ananassa HOM05D000371 ORTHO05D008019 2.0e-22 109.8 110 57.3
arahy.Tifrunner.gnm1.ann1.1L6ASM Arachis hypogaea HOM05D000371 ORTHO05D008019 2.6e-22 109.4 69 72.5
Dinv06770 Davidia involucrata HOM05D000371 ORTHO05D008019 2.6e-22 109.4 73 71.2
MD01G1136400 Malus domestica HOM05D000371 ORTHO05D008019 2.6e-22 109.4 69 72.5
Os01g0844300 Oryza sativa ssp. japonica HOM05D000371 ORTHO05D008019 2.6e-22 109.4 70 72.9
Ah.16g102470 Amaranthus hybridus HOM05D003811 ORTHO05D008019 3.4e-22 109.0 93 63.4
PGR142G1272 Punica granatum HOM05D000371 ORTHO05D008019 3.4e-22 109.0 70 72.9
vmacro07056 Vaccinium macrocarpon HOM05D000371 ORTHO05D008019 3.4e-22 109.0 117 53.8
arahy.Tifrunner.gnm1.ann1.JFIJ48 Arachis hypogaea HOM05D000371 ORTHO05D008019 4.4e-22 108.6 69 71.0
BcaB01g00086 Brassica carinata HOM05D000371 ORTHO05D008019 4.4e-22 108.6 71 71.8
MBI14_g04656_MAGBIO Magnolia biondii HOM05D000371 ORTHO05D008019 4.4e-22 108.6 71 71.8
Potri.008G057900 Populus trichocarpa HOM05D000371 ORTHO05D008019 4.4e-22 108.6 66 78.8
Actinidia02935 Actinidia chinensis HOM05D000371 ORTHO05D008019 5.8e-22 108.2 73 72.6
BcaB02g07683 Brassica carinata HOM05D000371 ORTHO05D008019 5.8e-22 108.2 71 71.8
Duzib114G0336 Durio zibethinus HOM05D000371 ORTHO05D008019 5.8e-22 108.2 73 71.2
FvH4_7g22820 Fragaria vesca HOM05D000371 ORTHO05D008019 5.8e-22 108.2 110 56.4
FAN06G1941 Fragaria x ananassa HOM05D000371 ORTHO05D008019 5.8e-22 108.2 110 56.4
FAN06G2012 Fragaria x ananassa HOM05D000371 ORTHO05D008019 5.8e-22 108.2 110 56.4
Prupe.2G238000 Prunus persica HOM05D000371 ORTHO05D008019 5.8e-22 108.2 67 74.6
BcaC07g39878 Brassica carinata HOM05D000371 ORTHO05D008019 7.6e-22 107.8 71 70.4
C08p30830 Brassica napus HOM05D000371 ORTHO05D008019 7.6e-22 107.8 71 70.4
BolC8t50709H Brassica oleracea HOM05D000371 ORTHO05D008019 7.6e-22 107.8 71 70.4
RcHm_v2.0_Chr1g0367961 Rosa chinensis HOM05D000371 ORTHO05D008019 9.9e-22 107.5 110 56.4
FAN03G2093 Fragaria x ananassa HOM05D000371 ORTHO05D008019 1.7e-21 106.7 110 55.5
FAN10G2093 Fragaria x ananassa HOM05D000371 ORTHO05D008019 1.7e-21 106.7 110 55.5
HPP92_019450 Vanilla planifolia HOM05D000371 ORTHO05D008019 1.7e-21 106.7 70 72.9
Cc02_g07590 Coffea canephora HOM05D000371 ORTHO05D008019 2.2e-21 106.3 71 69.0
A09p48530 Brassica napus HOM05D000371 ORTHO05D008019 2.9e-21 105.9 71 69.0
BraA09t40305Z Brassica rapa HOM05D000371 ORTHO05D008019 2.9e-21 105.9 71 69.0
Sabra10G0155600 Salix brachista HOM05D000371 ORTHO05D008019 4.9e-21 105.1 66 75.8
SEGI_15620 Sequoiadendron giganteum HOM05D000371 ORTHO05D008019 4.9e-21 105.1 69 68.1
SEGI_39657 Sequoiadendron giganteum HOM05D000371 ORTHO05D008019 4.9e-21 105.1 69 68.1
Ca_05882_v3 Cicer arietinum L. HOM05D000371 ORTHO05D008019 5.4e-20 101.7 102 56.9
Lj8A82T52 Lonicera japonica HOM05D000371 ORTHO05D008019 5.4e-20 101.7 63 76.2
COL.COLO4_15088 Corchorus olitorius HOM05D000371 ORTHO05D008019 2.1e-19 99.8 63 73.0
AUR62012115 Chenopodium quinoa HOM05D000371 ORTHO05D008019 2.7e-19 99.4 59 78.0
AUR62040720 Chenopodium quinoa HOM05D000371 ORTHO05D008019 2.7e-19 99.4 59 78.0
SMO143G0281 Selaginella moellendorffii HOM05D000371 ORTHO05D008019 3.9e-18 95.5 66 65.2
CBR_g11111 Chara braunii HOM05D000371 ORTHO05D008019 4.3e-17 92.0 71 62.0
ClCG11G006790 Citrullus lanatus HOM05D000371 ORTHO05D008019 4.3e-17 92.0 90 56.7
AagrBONN_evm.TU.Sc2ySwM_117.2045 Anthoceros agrestis HOM05D000371 ORTHO05D008019 6.2e-16 88.2 72 56.9
Pp3c9_23060 Physcomitrium patens HOM05D000371 ORTHO05D008019 3.1e-15 85.9 71 53.5
Pp3c15_21140 Physcomitrium patens HOM05D000371 ORTHO05D008019 2.6e-14 82.8 69 53.6
HanXRQChr02g0050401 Helianthus annuus HOM05D000371 ORTHO05D008019 4.2e-12 75.5 45 88.9
CSS0017369 Camellia sinensis var. sinensis HOM05D000371 ORTHO05D008019 1.2e-11 73.9 71 56.3
Nitab4.5_0001495g0120 Nicotiana tabacum HOM05D000371 ORTHO05D008019 2.7e-11 72.8 67 58.2
EL10As1g23098 Beta vulgaris HOM05D000371 ORTHO05D008019 6.9e-07 58.2 32 75.0
Rhsim03G0135800 Rhododendron simsii HOM05D000371 ORTHO05D008019 6.9e-07 58.2 44 65.9
MCO15G095 Micromonas commoda HOM05D000371 ORTHO05D006340 9.0e-07 57.8 37 70.3
Cre09.g398067 Chlamydomonas reinhardtii HOM05D000371 ORTHO05D001484 2.6e-06 56.2 44 61.4
AagrBONN_evm.TU.Sc2ySwM_344.3862 Anthoceros agrestis HOM05D000371 ORTHO05D001484 5.8e-06 55.1 39 61.5
CBR_g29656 Chara braunii HOM05D000371 ORTHO05D001484 7.6e-06 54.7 39 61.5
CBR_g29659 Chara braunii HOM05D000371 ORTHO05D001484 7.6e-06 54.7 39 61.5


User provided reference genes

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